Protein–RNA interactions for Protein: O60902

SHOX2, Short stature homeobox protein 2, humanhuman

Predicted RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2O60902 Y_RNA.28-201ENST00000362554 111 ntBASIC-0.06□□□□□ -2.42
SHOX2O60902 RNU6-451P-201ENST00000362921 107 ntBASIC-0.06□□□□□ -2.42
SHOX2O60902 RNU6-1059P-201ENST00000363752 98 ntBASIC-0.06□□□□□ -2.42
SHOX2O60902 SNORD114-9-201ENST00000364370 72 ntBASIC-0.06□□□□□ -2.42
SHOX2O60902 SNORA32.1-201ENST00000364514 115 ntBASIC-0.06□□□□□ -2.42
SHOX2O60902 SNORA1.2-201ENST00000365189 134 ntBASIC-0.06□□□□□ -2.42
SHOX2O60902 RNU6-442P-201ENST00000383968 104 ntBASIC-0.06□□□□□ -2.42
SHOX2O60902 RNU6-483P-201ENST00000384088 108 ntBASIC-0.06□□□□□ -2.42
SHOX2O60902 RNU6-514P-201ENST00000384208 107 ntBASIC-0.06□□□□□ -2.42
SHOX2O60902 RNU6-842P-201ENST00000384269 107 ntBASIC-0.06□□□□□ -2.42
SHOX2O60902 RNU6-332P-201ENST00000391193 108 ntBASIC-0.06□□□□□ -2.42
SHOX2O60902 AL031003.1-201ENST00000404229 172 ntBASIC-0.06□□□□□ -2.42
SHOX2O60902 RNU6ATAC6P-201ENST00000408132 126 ntBASIC-0.06□□□□□ -2.42
SHOX2O60902 RNU7-56P-201ENST00000458744 62 ntBASIC-0.06□□□□□ -2.42
SHOX2O60902 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC-0.06□□□□□ -2.42
SHOX2O60902 RNA5SP94-201ENST00000516917 108 ntBASIC-0.06□□□□□ -2.42
SHOX2O60902 MIR2355-201ENST00000517199 87 ntBASIC-0.06□□□□□ -2.42
SHOX2O60902 MIR3942-201ENST00000585264 109 ntBASIC-0.06□□□□□ -2.42
SHOX2O60902 SNORD45.3-201ENST00000363836 72 ntBASIC-0.07□□□□□ -2.42
SHOX2O60902 Y_RNA.203-201ENST00000364106 102 ntBASIC-0.07□□□□□ -2.42
SHOX2O60902 RNU6-1013P-201ENST00000384180 107 ntBASIC-0.07□□□□□ -2.42
SHOX2O60902 RNU6-318P-201ENST00000384283 103 ntBASIC-0.07□□□□□ -2.42
SHOX2O60902 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.07□□□□□ -2.42
SHOX2O60902 U8.17-201ENST00000391292 132 ntBASIC-0.07□□□□□ -2.42
SHOX2O60902 MTCO2P33-201ENST00000402100 465 ntBASIC-0.07□□□□□ -2.42
SHOX2O60902 RNU2-61P-201ENST00000411069 191 ntBASIC-0.07□□□□□ -2.42
SHOX2O60902 SCARNA21.1-201ENST00000515996 128 ntBASIC-0.07□□□□□ -2.42
SHOX2O60902 RNU6-864P-201ENST00000516256 108 ntBASIC-0.07□□□□□ -2.42
SHOX2O60902 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC-0.07□□□□□ -2.42
SHOX2O60902 AC112693.2-201ENST00000556538 232 ntBASIC-0.07□□□□□ -2.42
SHOX2O60902 AC004467.1-201ENST00000615678 330 ntBASIC-0.07□□□□□ -2.42
SHOX2O60902 uc_338.4-201ENST00000616635 176 ntBASIC-0.07□□□□□ -2.42
SHOX2O60902 MT-TQ-201ENST00000387372 72 ntBASIC-0.08□□□□□ -2.42
SHOX2O60902 MIR802-201ENST00000390235 94 ntBASIC-0.08□□□□□ -2.42
SHOX2O60902 RNU6-205P-201ENST00000390858 107 ntBASIC-0.08□□□□□ -2.42
SHOX2O60902 SNORD12B-201ENST00000410433 91 ntBASIC-0.08□□□□□ -2.42
SHOX2O60902 RNU6-373P-201ENST00000411247 98 ntBASIC-0.08□□□□□ -2.42
SHOX2O60902 MTND2P22-201ENST00000444325 1033 ntBASIC-0.08□□□□□ -2.42
SHOX2O60902 MTND1P17-201ENST00000448961 204 ntBASIC-0.08□□□□□ -2.42
SHOX2O60902 CHEK2P4-201ENST00000450340 246 ntBASIC-0.08□□□□□ -2.42
SHOX2O60902 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC-0.08□□□□□ -2.42
SHOX2O60902 RNA5SP227-201ENST00000516184 113 ntBASIC-0.08□□□□□ -2.42
SHOX2O60902 SNORA25.18-201ENST00000607153 114 ntBASIC-0.08□□□□□ -2.42
SHOX2O60902 MIR6128-201ENST00000615528 109 ntBASIC-0.08□□□□□ -2.42
SHOX2O60902 MIR3662-201ENST00000637030 95 ntBASIC-0.08□□□□□ -2.42
SHOX2O60902 RNY4P27-201ENST00000363341 96 ntBASIC-0.09□□□□□ -2.42
SHOX2O60902 RNA5SP214-201ENST00000363378 118 ntBASIC-0.09□□□□□ -2.42
SHOX2O60902 Y_RNA.146-201ENST00000363549 102 ntBASIC-0.09□□□□□ -2.42
SHOX2O60902 SNORA63C-201ENST00000364578 129 ntBASIC-0.09□□□□□ -2.42
SHOX2O60902 Y_RNA.358-201ENST00000365491 99 ntBASIC-0.09□□□□□ -2.42
SHOX2O60902 SNORD116-8-201ENST00000384365 95 ntBASIC-0.09□□□□□ -2.42
SHOX2O60902 SNORA8.2-201ENST00000384372 139 ntBASIC-0.09□□□□□ -2.42
SHOX2O60902 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC-0.09□□□□□ -2.42
SHOX2O60902 MTND3P21-201ENST00000433774 331 ntBASIC-0.09□□□□□ -2.42
SHOX2O60902 Y_RNA.704-201ENST00000516851 102 ntBASIC-0.09□□□□□ -2.42
SHOX2O60902 MIR3611-201ENST00000584484 83 ntBASIC-0.09□□□□□ -2.42
SHOX2O60902 MIR4791-201ENST00000607666 84 ntBASIC-0.09□□□□□ -2.42
SHOX2O60902 AC005014.2-201ENST00000607795 599 ntBASIC-0.09□□□□□ -2.42
SHOX2O60902 AC078883.4-201ENST00000623218 367 ntBASIC-0.09□□□□□ -2.42
SHOX2O60902 MTND1P7-201ENST00000632801 297 ntBASIC-0.09□□□□□ -2.42
SHOX2O60902 RNU6-874P-201ENST00000362390 105 ntBASIC-0.1□□□□□ -2.43
SHOX2O60902 MIR570-201ENST00000384917 97 ntBASIC-0.1□□□□□ -2.43
SHOX2O60902 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC-0.1□□□□□ -2.43
SHOX2O60902 AC015818.7-201ENST00000428754 109 ntBASIC-0.1□□□□□ -2.43
SHOX2O60902 CEP57L1P1-201ENST00000430943 1201 ntBASIC-0.1□□□□□ -2.43
SHOX2O60902 AC087499.7-201ENST00000441958 109 ntBASIC-0.1□□□□□ -2.43
SHOX2O60902 Y_RNA.660-201ENST00000516002 120 ntBASIC-0.1□□□□□ -2.43
SHOX2O60902 AC090897.1-201ENST00000580909 226 ntBASIC-0.1□□□□□ -2.43
SHOX2O60902 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-0.1□□□□□ -2.43
SHOX2O60902 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC-0.1□□□□□ -2.43
SHOX2O60902 MIR1321-201ENST00000637766 79 ntBASIC-0.1□□□□□ -2.43
SHOX2O60902 RNY4P7-201ENST00000364600 96 ntBASIC-0.11□□□□□ -2.43
SHOX2O60902 RNA5SP496-201ENST00000391240 109 ntBASIC-0.11□□□□□ -2.43
SHOX2O60902 RNU6-192P-201ENST00000391253 100 ntBASIC-0.11□□□□□ -2.43
SHOX2O60902 RNU2-66P-201ENST00000410650 161 ntBASIC-0.11□□□□□ -2.43
SHOX2O60902 RNU6-847P-201ENST00000411115 108 ntBASIC-0.11□□□□□ -2.43
SHOX2O60902 AC009161.1-201ENST00000417306 376 ntBASIC-0.11□□□□□ -2.43
SHOX2O60902 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC-0.11□□□□□ -2.43
SHOX2O60902 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC-0.11□□□□□ -2.43
SHOX2O60902 RNU6-408P-201ENST00000515910 100 ntBASIC-0.11□□□□□ -2.43
SHOX2O60902 RNU6-566P-201ENST00000516790 107 ntBASIC-0.11□□□□□ -2.43
SHOX2O60902 AC020891.4-201ENST00000605745 93 ntBASIC-0.11□□□□□ -2.43
SHOX2O60902 RN7SKP299-201ENST00000606679 301 ntBASIC-0.11□□□□□ -2.43
SHOX2O60902 NEAT1_2.1-201ENST00000620525 105 ntBASIC-0.11□□□□□ -2.43
SHOX2O60902 RNU6-1301P-201ENST00000362724 104 ntBASIC-0.12□□□□□ -2.43
SHOX2O60902 Y_RNA.86-201ENST00000363020 111 ntBASIC-0.12□□□□□ -2.43
SHOX2O60902 Y_RNA.416-201ENST00000384014 113 ntBASIC-0.12□□□□□ -2.43
SHOX2O60902 Y_RNA.475-201ENST00000384345 101 ntBASIC-0.12□□□□□ -2.43
SHOX2O60902 RNU6-125P-201ENST00000384505 107 ntBASIC-0.12□□□□□ -2.43
SHOX2O60902 AC074085.1-201ENST00000413598 418 ntBASIC-0.12□□□□□ -2.43
SHOX2O60902 Y_RNA.674-201ENST00000516362 113 ntBASIC-0.12□□□□□ -2.43
SHOX2O60902 RNU6-273P-201ENST00000516937 96 ntBASIC-0.12□□□□□ -2.43
SHOX2O60902 RNU7-116P-201ENST00000516940 62 ntBASIC-0.12□□□□□ -2.43
SHOX2O60902 RNU6-158P-201ENST00000517104 100 ntBASIC-0.12□□□□□ -2.43
SHOX2O60902 AC104408.1-201ENST00000605241 170 ntBASIC-0.12□□□□□ -2.43
SHOX2O60902 JPX_2.1-201ENST00000614161 69 ntBASIC-0.12□□□□□ -2.43
SHOX2O60902 MIR1295B-201ENST00000636144 60 ntBASIC-0.12□□□□□ -2.43
SHOX2O60902 RNU6-324P-201ENST00000363957 106 ntBASIC-0.13□□□□□ -2.43
SHOX2O60902 Y_RNA.242-201ENST00000364473 110 ntBASIC-0.13□□□□□ -2.43
SHOX2O60902 RNU6-10P-201ENST00000384036 107 ntBASIC-0.13□□□□□ -2.43
Retrieved 100 of 98,524 protein–RNA pairs in 165 ms