Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 RNU6-833P-201ENST00000363486 107 ntBASIC1.93□□□□□ -2.1
CTNND1O60716 RNU4-10P-201ENST00000364383 140 ntBASIC1.93□□□□□ -2.1
CTNND1O60716 RNU6-338P-201ENST00000383888 105 ntBASIC1.93□□□□□ -2.1
CTNND1O60716 MIR513A1-201ENST00000385138 129 ntBASIC1.93□□□□□ -2.1
CTNND1O60716 HSPE1P24-201ENST00000450782 238 ntBASIC1.93□□□□□ -2.1
CTNND1O60716 AC023449.1-201ENST00000454464 154 ntBASIC1.93□□□□□ -2.1
CTNND1O60716 SNORD116-28-201ENST00000516123 91 ntBASIC1.93□□□□□ -2.1
CTNND1O60716 RNU6-1271P-201ENST00000517049 105 ntBASIC1.93□□□□□ -2.1
CTNND1O60716 RNU6-111P-201ENST00000517179 105 ntBASIC1.93□□□□□ -2.1
CTNND1O60716 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.93□□□□□ -2.1
CTNND1O60716 MIR3122-201ENST00000577243 73 ntBASIC1.93□□□□□ -2.1
CTNND1O60716 AC087685.1-201ENST00000587507 141 ntBASIC1.93□□□□□ -2.1
CTNND1O60716 Y_RNA.24-201ENST00000362508 103 ntBASIC1.92□□□□□ -2.1
CTNND1O60716 PIGPP3-201ENST00000425307 415 ntBASIC1.92□□□□□ -2.1
CTNND1O60716 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.92□□□□□ -2.1
CTNND1O60716 AC114811.1-201ENST00000507207 168 ntBASIC1.92□□□□□ -2.1
CTNND1O60716 RNU4-71P-201ENST00000516258 113 ntBASIC1.92□□□□□ -2.1
CTNND1O60716 SNORD45.4-201ENST00000516629 73 ntBASIC1.92□□□□□ -2.1
CTNND1O60716 AC024614.2-201ENST00000577584 372 ntBASIC1.92□□□□□ -2.1
CTNND1O60716 MIR4778-201ENST00000577635 80 ntBASIC1.92□□□□□ -2.1
CTNND1O60716 SNORD53B-201ENST00000577887 78 ntBASIC1.92□□□□□ -2.1
CTNND1O60716 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.92□□□□□ -2.1
CTNND1O60716 AC011921.3-201ENST00000605540 361 ntBASIC1.92□□□□□ -2.1
CTNND1O60716 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.92□□□□□ -2.1
CTNND1O60716 WWP1P1-201ENST00000466609 2769 ntBASIC1.92□□□□□ -2.1
CTNND1O60716 Y_RNA.262-201ENST00000364641 102 ntBASIC1.91□□□□□ -2.1
CTNND1O60716 SNORD50B-201ENST00000364995 70 ntBASIC1.91□□□□□ -2.1
CTNND1O60716 snoU2-30.1-201ENST00000365012 70 ntBASIC1.91□□□□□ -2.1
CTNND1O60716 RNY4P28-201ENST00000365281 93 ntBASIC1.91□□□□□ -2.1
CTNND1O60716 RNA5SP259-201ENST00000365541 109 ntBASIC1.91□□□□□ -2.1
CTNND1O60716 MIR891A-201ENST00000401237 79 ntBASIC1.91□□□□□ -2.1
CTNND1O60716 MIR934-201ENST00000401241 83 ntBASIC1.91□□□□□ -2.1
CTNND1O60716 RN7SKP101-201ENST00000411376 320 ntBASIC1.91□□□□□ -2.1
CTNND1O60716 SNORD11-201ENST00000459124 84 ntBASIC1.91□□□□□ -2.1
CTNND1O60716 NDUFA4P2-201ENST00000489989 244 ntBASIC1.91□□□□□ -2.1
CTNND1O60716 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.91□□□□□ -2.1
CTNND1O60716 AC100767.1-201ENST00000528178 123 ntBASIC1.91□□□□□ -2.1
CTNND1O60716 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC1.91□□□□□ -2.1
CTNND1O60716 MIR8063-201ENST00000621930 81 ntBASIC1.91□□□□□ -2.1
CTNND1O60716 MIR302D-201ENST00000362275 68 ntBASIC1.9□□□□□ -2.11
CTNND1O60716 SNORD33-201ENST00000362761 85 ntBASIC1.9□□□□□ -2.11
CTNND1O60716 RNU6-60P-201ENST00000364792 103 ntBASIC1.9□□□□□ -2.11
CTNND1O60716 SNORD1A-201ENST00000364968 72 ntBASIC1.9□□□□□ -2.11
CTNND1O60716 MIR1287-201ENST00000408492 90 ntBASIC1.9□□□□□ -2.11
CTNND1O60716 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC1.9□□□□□ -2.11
CTNND1O60716 AC093850.1-201ENST00000454121 251 ntBASIC1.9□□□□□ -2.11
CTNND1O60716 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.9□□□□□ -2.11
CTNND1O60716 AL645939.4-201ENST00000604495 135 ntBASIC1.9□□□□□ -2.11
CTNND1O60716 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.9□□□□□ -2.11
CTNND1O60716 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
CTNND1O60716 RNU6-199P-201ENST00000362954 107 ntBASIC1.89□□□□□ -2.11
CTNND1O60716 RNU1-42P-201ENST00000364033 160 ntBASIC1.89□□□□□ -2.11
CTNND1O60716 RNU1-78P-201ENST00000391248 165 ntBASIC1.89□□□□□ -2.11
CTNND1O60716 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.89□□□□□ -2.11
CTNND1O60716 COX6CP14-201ENST00000469580 174 ntBASIC1.89□□□□□ -2.11
CTNND1O60716 AL021707.8-201ENST00000609428 183 ntBASIC1.89□□□□□ -2.11
CTNND1O60716 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.89□□□□□ -2.11
CTNND1O60716 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
CTNND1O60716 RNU6-653P-201ENST00000363074 106 ntBASIC1.88□□□□□ -2.11
CTNND1O60716 RNY1-201ENST00000364228 113 ntBASIC1.88□□□□□ -2.11
CTNND1O60716 Y_RNA.242-201ENST00000364473 110 ntBASIC1.88□□□□□ -2.11
CTNND1O60716 Y_RNA.336-201ENST00000365307 109 ntBASIC1.88□□□□□ -2.11
CTNND1O60716 Y_RNA.476-201ENST00000384347 108 ntBASIC1.88□□□□□ -2.11
CTNND1O60716 Y_RNA.572-201ENST00000384757 98 ntBASIC1.88□□□□□ -2.11
CTNND1O60716 RPL31P63-201ENST00000422565 375 ntBASIC1.88□□□□□ -2.11
CTNND1O60716 HMGN2P32-201ENST00000444648 269 ntBASIC1.88□□□□□ -2.11
CTNND1O60716 AC079140.2-201ENST00000506193 142 ntBASIC1.88□□□□□ -2.11
CTNND1O60716 MIR8070-201ENST00000616510 88 ntBASIC1.88□□□□□ -2.11
CTNND1O60716 uc_338.4-201ENST00000616635 176 ntBASIC1.88□□□□□ -2.11
CTNND1O60716 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
CTNND1O60716 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
CTNND1O60716 RNU6-379P-201ENST00000363813 104 ntBASIC1.87□□□□□ -2.11
CTNND1O60716 SNORD14E-201ENST00000364009 85 ntBASIC1.87□□□□□ -2.11
CTNND1O60716 Y_RNA.229-201ENST00000364347 113 ntBASIC1.87□□□□□ -2.11
CTNND1O60716 RN7SKP51-201ENST00000410781 304 ntBASIC1.87□□□□□ -2.11
CTNND1O60716 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.87□□□□□ -2.11
CTNND1O60716 MIR4422-201ENST00000581938 83 ntBASIC1.87□□□□□ -2.11
CTNND1O60716 AC008507.4-201ENST00000585464 127 ntBASIC1.87□□□□□ -2.11
CTNND1O60716 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.87□□□□□ -2.11
CTNND1O60716 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
CTNND1O60716 SNORD48-201ENST00000364953 64 ntBASIC1.86□□□□□ -2.11
CTNND1O60716 Y_RNA.626-201ENST00000411288 95 ntBASIC1.86□□□□□ -2.11
CTNND1O60716 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.86□□□□□ -2.11
CTNND1O60716 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC1.86□□□□□ -2.11
CTNND1O60716 AL049861.1-201ENST00000603130 150 ntBASIC1.86□□□□□ -2.11
CTNND1O60716 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.86□□□□□ -2.11
CTNND1O60716 AC106754.2-201ENST00000623006 233 ntBASIC1.86□□□□□ -2.11
CTNND1O60716 MIR517C-201ENST00000385103 95 ntBASIC1.85□□□□□ -2.11
CTNND1O60716 MIR802-201ENST00000390235 94 ntBASIC1.85□□□□□ -2.11
CTNND1O60716 SNORA67.6-201ENST00000391093 99 ntBASIC1.85□□□□□ -2.11
CTNND1O60716 Y_RNA.587-201ENST00000391210 103 ntBASIC1.85□□□□□ -2.11
CTNND1O60716 MIR1298-201ENST00000408783 112 ntBASIC1.85□□□□□ -2.11
CTNND1O60716 AC009474.2-201ENST00000451383 136 ntBASIC1.85□□□□□ -2.11
CTNND1O60716 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC1.85□□□□□ -2.11
CTNND1O60716 Y_RNA.199-201ENST00000364014 102 ntBASIC1.84□□□□□ -2.11
CTNND1O60716 SNORA2.2-201ENST00000365473 135 ntBASIC1.84□□□□□ -2.11
CTNND1O60716 RNU6-442P-201ENST00000383968 104 ntBASIC1.84□□□□□ -2.11
CTNND1O60716 MIR452-201ENST00000385020 85 ntBASIC1.84□□□□□ -2.11
CTNND1O60716 MIR616-201ENST00000385293 97 ntBASIC1.84□□□□□ -2.11
CTNND1O60716 AC027119.1-201ENST00000440877 241 ntBASIC1.84□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 119.4 ms