Protein–RNA interactions for Protein: O60341

KDM1A, Lysine-specific histone demethylase 1A, humanhuman

Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1AO60341 RNU6-365P-201ENST00000517113 106 ntBASIC2.16□□□□□ -2.06
KDM1AO60341 Y_RNA.336-201ENST00000365307 109 ntBASIC2.15□□□□□ -2.07
KDM1AO60341 RNY1P5-201ENST00000383890 115 ntBASIC2.15□□□□□ -2.07
KDM1AO60341 RNU6-746P-201ENST00000384112 109 ntBASIC2.15□□□□□ -2.07
KDM1AO60341 Y_RNA.521-201ENST00000384560 114 ntBASIC2.15□□□□□ -2.07
KDM1AO60341 RNU6-360P-201ENST00000390944 104 ntBASIC2.15□□□□□ -2.07
KDM1AO60341 AC244636.1-201ENST00000421152 228 ntBASIC2.15□□□□□ -2.07
KDM1AO60341 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
KDM1AO60341 AC114811.1-201ENST00000507207 168 ntBASIC2.15□□□□□ -2.07
KDM1AO60341 SNORD116-25-201ENST00000516517 92 ntBASIC2.15□□□□□ -2.07
KDM1AO60341 Y_RNA.703-201ENST00000516846 111 ntBASIC2.15□□□□□ -2.07
KDM1AO60341 RNA5SP364-201ENST00000516938 78 ntBASIC2.15□□□□□ -2.07
KDM1AO60341 RNU6-1116P-201ENST00000517269 99 ntBASIC2.15□□□□□ -2.07
KDM1AO60341 DNAJC19P2-201ENST00000593340 302 ntBASIC2.15□□□□□ -2.07
KDM1AO60341 AL096840.1-201ENST00000603287 93 ntBASIC2.15□□□□□ -2.07
KDM1AO60341 AL773524.1-201ENST00000614065 229 ntBASIC2.15□□□□□ -2.07
KDM1AO60341 AL513423.1-201ENST00000621695 132 ntBASIC2.15□□□□□ -2.07
KDM1AO60341 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.15□□□□□ -2.07
KDM1AO60341 Y_RNA.66-201ENST00000362862 102 ntBASIC2.14□□□□□ -2.07
KDM1AO60341 RNU6-978P-201ENST00000364371 103 ntBASIC2.14□□□□□ -2.07
KDM1AO60341 Y_RNA.393-201ENST00000383936 102 ntBASIC2.14□□□□□ -2.07
KDM1AO60341 Y_RNA.506-201ENST00000384494 102 ntBASIC2.14□□□□□ -2.07
KDM1AO60341 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.14□□□□□ -2.07
KDM1AO60341 AC104435.1-201ENST00000483483 166 ntBASIC2.14□□□□□ -2.07
KDM1AO60341 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC2.14□□□□□ -2.07
KDM1AO60341 AC022254.1-201ENST00000567857 235 ntBASIC2.14□□□□□ -2.07
KDM1AO60341 Y_RNA.778-201ENST00000620203 90 ntBASIC2.14□□□□□ -2.07
KDM1AO60341 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC2.14□□□□□ -2.07
KDM1AO60341 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
KDM1AO60341 RNA5SP138-201ENST00000365098 114 ntBASIC2.13□□□□□ -2.07
KDM1AO60341 SNORD24-201ENST00000383884 75 ntBASIC2.13□□□□□ -2.07
KDM1AO60341 RNU6-125P-201ENST00000384505 107 ntBASIC2.13□□□□□ -2.07
KDM1AO60341 RNU6-768P-201ENST00000384683 107 ntBASIC2.13□□□□□ -2.07
KDM1AO60341 PGBD4P5-201ENST00000445958 426 ntBASIC2.13□□□□□ -2.07
KDM1AO60341 RNU6-504P-201ENST00000516568 104 ntBASIC2.13□□□□□ -2.07
KDM1AO60341 MIR3658-201ENST00000636291 56 ntBASIC2.13□□□□□ -2.07
KDM1AO60341 AC092881.1-201ENST00000638218 2733 ntBASIC2.13□□□□□ -2.07
KDM1AO60341 RNU6-774P-201ENST00000363238 107 ntBASIC2.12□□□□□ -2.07
KDM1AO60341 RNU6-833P-201ENST00000363486 107 ntBASIC2.12□□□□□ -2.07
KDM1AO60341 RNU6-597P-201ENST00000365620 102 ntBASIC2.12□□□□□ -2.07
KDM1AO60341 MIR660-201ENST00000385235 97 ntBASIC2.12□□□□□ -2.07
KDM1AO60341 MIR891A-201ENST00000401237 79 ntBASIC2.12□□□□□ -2.07
KDM1AO60341 Z98742.3-201ENST00000418637 326 ntBASIC2.12□□□□□ -2.07
KDM1AO60341 SNRPGP14-201ENST00000435400 219 ntBASIC2.12□□□□□ -2.07
KDM1AO60341 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC2.12□□□□□ -2.07
KDM1AO60341 SNRPGP13-201ENST00000442212 177 ntBASIC2.12□□□□□ -2.07
KDM1AO60341 RNU6-717P-201ENST00000459076 104 ntBASIC2.12□□□□□ -2.07
KDM1AO60341 RNU7-12P-201ENST00000516030 62 ntBASIC2.12□□□□□ -2.07
KDM1AO60341 MIR4299-201ENST00000577899 72 ntBASIC2.12□□□□□ -2.07
KDM1AO60341 MIR3133-201ENST00000583157 78 ntBASIC2.12□□□□□ -2.07
KDM1AO60341 AL627230.6-201ENST00000611129 280 ntBASIC2.12□□□□□ -2.07
KDM1AO60341 AC006441.5-201ENST00000612680 209 ntBASIC2.12□□□□□ -2.07
KDM1AO60341 MIR424-201ENST00000362227 98 ntBASIC2.11□□□□□ -2.07
KDM1AO60341 U8.2-201ENST00000363156 134 ntBASIC2.11□□□□□ -2.07
KDM1AO60341 RNU6-151P-201ENST00000364158 107 ntBASIC2.11□□□□□ -2.07
KDM1AO60341 RNU6-268P-201ENST00000364174 107 ntBASIC2.11□□□□□ -2.07
KDM1AO60341 SNORA70B-201ENST00000384210 135 ntBASIC2.11□□□□□ -2.07
KDM1AO60341 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.11□□□□□ -2.07
KDM1AO60341 Y_RNA.666-201ENST00000516187 112 ntBASIC2.11□□□□□ -2.07
KDM1AO60341 MIR3646-201ENST00000578301 84 ntBASIC2.11□□□□□ -2.07
KDM1AO60341 AC012493.3-201ENST00000604494 112 ntBASIC2.11□□□□□ -2.07
KDM1AO60341 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
KDM1AO60341 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC2.1□□□□□ -2.07
KDM1AO60341 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.1□□□□□ -2.07
KDM1AO60341 RNU6-661P-201ENST00000362409 107 ntBASIC2.1□□□□□ -2.07
KDM1AO60341 RNU6-888P-201ENST00000363010 101 ntBASIC2.1□□□□□ -2.07
KDM1AO60341 Y_RNA.400-201ENST00000383963 111 ntBASIC2.1□□□□□ -2.07
KDM1AO60341 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
KDM1AO60341 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
KDM1AO60341 SNORA3.2-201ENST00000408221 125 ntBASIC2.1□□□□□ -2.07
KDM1AO60341 MIR548O-201ENST00000408583 114 ntBASIC2.1□□□□□ -2.07
KDM1AO60341 RPL23AP6-201ENST00000446637 472 ntBASIC2.1□□□□□ -2.07
KDM1AO60341 AC007751.1-201ENST00000529260 376 ntBASIC2.1□□□□□ -2.07
KDM1AO60341 MIR4713-201ENST00000582691 75 ntBASIC2.1□□□□□ -2.07
KDM1AO60341 SNORD3E-202ENST00000627253 216 ntBASIC2.1□□□□□ -2.07
KDM1AO60341 MIR219B-201ENST00000637023 88 ntBASIC2.1□□□□□ -2.07
KDM1AO60341 RNU6-1123P-201ENST00000362347 106 ntBASIC2.09□□□□□ -2.07
KDM1AO60341 RNU6-414P-201ENST00000363705 104 ntBASIC2.09□□□□□ -2.07
KDM1AO60341 SNORA25.7-201ENST00000364375 127 ntBASIC2.09□□□□□ -2.07
KDM1AO60341 RNU4-11P-201ENST00000365287 132 ntBASIC2.09□□□□□ -2.07
KDM1AO60341 RNU6-439P-201ENST00000384188 106 ntBASIC2.09□□□□□ -2.07
KDM1AO60341 SNORD61-201ENST00000384252 73 ntBASIC2.09□□□□□ -2.07
KDM1AO60341 SNORD37.2-201ENST00000391075 66 ntBASIC2.09□□□□□ -2.07
KDM1AO60341 SNORA75.5-201ENST00000391291 81 ntBASIC2.09□□□□□ -2.07
KDM1AO60341 RN7SKP223-201ENST00000410582 62 ntBASIC2.09□□□□□ -2.07
KDM1AO60341 RNU6-1270P-201ENST00000517128 108 ntBASIC2.09□□□□□ -2.07
KDM1AO60341 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC2.09□□□□□ -2.07
KDM1AO60341 RNU6-199P-201ENST00000362954 107 ntBASIC2.08□□□□□ -2.08
KDM1AO60341 MIR548A2-201ENST00000384956 97 ntBASIC2.08□□□□□ -2.08
KDM1AO60341 RNA5SP338-201ENST00000410495 85 ntBASIC2.08□□□□□ -2.08
KDM1AO60341 HMGN2P19-201ENST00000425149 265 ntBASIC2.08□□□□□ -2.08
KDM1AO60341 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC2.08□□□□□ -2.08
KDM1AO60341 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC2.08□□□□□ -2.08
KDM1AO60341 RNU6-693P-201ENST00000516134 107 ntBASIC2.08□□□□□ -2.08
KDM1AO60341 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.08□□□□□ -2.08
KDM1AO60341 AL365205.2-201ENST00000594586 68 ntBASIC2.08□□□□□ -2.08
KDM1AO60341 MIR6844-201ENST00000637122 62 ntBASIC2.08□□□□□ -2.08
KDM1AO60341 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.08□□□□□ -2.08
KDM1AO60341 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
KDM1AO60341 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 278.4 ms