Protein–RNA interactions for Protein: O15116

LSM1, U6 snRNA-associated Sm-like protein LSm1, humanhuman

Known RBP Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1O15116 SNORA25.12-201ENST00000516202 82 ntBASIC0.07□□□□□ -2.4
LSM1O15116 RN7SKP295-201ENST00000517264 153 ntBASIC0.07□□□□□ -2.4
LSM1O15116 MIR4659A-201ENST00000580269 81 ntBASIC0.07□□□□□ -2.4
LSM1O15116 AC011476.5-201ENST00000615594 130 ntBASIC0.07□□□□□ -2.4
LSM1O15116 TPTEP1-208ENST00000636884 213 ntBASIC0.07□□□□□ -2.4
LSM1O15116 Y_RNA.3-201ENST00000362331 103 ntBASIC0.06□□□□□ -2.4
LSM1O15116 Y_RNA.516-201ENST00000384541 124 ntBASIC0.06□□□□□ -2.4
LSM1O15116 SNORD115-47-201ENST00000391226 86 ntBASIC0.06□□□□□ -2.4
LSM1O15116 SNORA75.6-201ENST00000391318 127 ntBASIC0.06□□□□□ -2.4
LSM1O15116 Y_RNA.599-201ENST00000410489 109 ntBASIC0.06□□□□□ -2.4
LSM1O15116 RNU2-70P-201ENST00000410718 179 ntBASIC0.06□□□□□ -2.4
LSM1O15116 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC0.06□□□□□ -2.4
LSM1O15116 AC138305.3-201ENST00000624988 240 ntBASIC0.06□□□□□ -2.4
LSM1O15116 MIR4315-1-201ENST00000636800 73 ntBASIC0.06□□□□□ -2.4
LSM1O15116 MIR4315-2-201ENST00000640925 73 ntBASIC0.06□□□□□ -2.4
LSM1O15116 Y_RNA.476-201ENST00000384347 108 ntBASIC0.05□□□□□ -2.4
LSM1O15116 RNU6-679P-201ENST00000391003 106 ntBASIC0.05□□□□□ -2.4
LSM1O15116 MIR938-201ENST00000401216 83 ntBASIC0.05□□□□□ -2.4
LSM1O15116 RNU4-14P-201ENST00000410858 122 ntBASIC0.05□□□□□ -2.4
LSM1O15116 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.05□□□□□ -2.4
LSM1O15116 SNORD11-201ENST00000459124 84 ntBASIC0.05□□□□□ -2.4
LSM1O15116 snoU13.16-201ENST00000459350 104 ntBASIC0.05□□□□□ -2.4
LSM1O15116 RPL23AP54-201ENST00000495129 419 ntBASIC0.05□□□□□ -2.4
LSM1O15116 PRDX4P1-201ENST00000507189 574 ntBASIC0.05□□□□□ -2.4
LSM1O15116 RNU6-911P-201ENST00000516523 104 ntBASIC0.05□□□□□ -2.4
LSM1O15116 RNU7-4P-201ENST00000516961 62 ntBASIC0.05□□□□□ -2.4
LSM1O15116 AC069113.3-201ENST00000521019 150 ntBASIC0.05□□□□□ -2.4
LSM1O15116 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC0.05□□□□□ -2.4
LSM1O15116 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC0.05□□□□□ -2.4
LSM1O15116 AC008608.1-201ENST00000603910 127 ntBASIC0.05□□□□□ -2.4
LSM1O15116 MIR548AY-201ENST00000617669 107 ntBASIC0.05□□□□□ -2.4
LSM1O15116 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC0.04□□□□□ -2.4
LSM1O15116 SNORD81.1-201ENST00000363064 77 ntBASIC0.04□□□□□ -2.4
LSM1O15116 SNORA42.1-201ENST00000363515 137 ntBASIC0.04□□□□□ -2.4
LSM1O15116 RNU6-674P-201ENST00000363831 107 ntBASIC0.04□□□□□ -2.4
LSM1O15116 RNU4-50P-201ENST00000364361 141 ntBASIC0.04□□□□□ -2.4
LSM1O15116 RNU6-1175P-201ENST00000365200 107 ntBASIC0.04□□□□□ -2.4
LSM1O15116 SNORD71-201ENST00000411292 86 ntBASIC0.04□□□□□ -2.4
LSM1O15116 AC005042.3-201ENST00000453230 174 ntBASIC0.04□□□□□ -2.4
LSM1O15116 RNU7-62P-201ENST00000458856 62 ntBASIC0.04□□□□□ -2.4
LSM1O15116 RNU6-470P-201ENST00000515954 104 ntBASIC0.04□□□□□ -2.4
LSM1O15116 SNORA18.4-201ENST00000516440 124 ntBASIC0.04□□□□□ -2.4
LSM1O15116 RN7SL793P-201ENST00000583259 296 ntBASIC0.04□□□□□ -2.4
LSM1O15116 AC023932.2-201ENST00000603176 175 ntBASIC0.04□□□□□ -2.4
LSM1O15116 SNORA25.18-201ENST00000607153 114 ntBASIC0.04□□□□□ -2.4
LSM1O15116 AC002553.4-201ENST00000616896 331 ntBASIC0.04□□□□□ -2.4
LSM1O15116 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.04□□□□□ -2.4
LSM1O15116 RNU6-815P-201ENST00000384080 113 ntBASIC0.03□□□□□ -2.4
LSM1O15116 SNORA8.2-201ENST00000384372 139 ntBASIC0.03□□□□□ -2.4
LSM1O15116 Y_RNA.646-201ENST00000410980 101 ntBASIC0.03□□□□□ -2.4
LSM1O15116 MIR18B-201ENST00000454574 71 ntBASIC0.03□□□□□ -2.4
LSM1O15116 SNORA62.5-201ENST00000516634 120 ntBASIC0.03□□□□□ -2.4
LSM1O15116 AC144568.1-201ENST00000520139 137 ntBASIC0.03□□□□□ -2.4
LSM1O15116 MIR2681-201ENST00000581814 105 ntBASIC0.03□□□□□ -2.4
LSM1O15116 AC005730.3-201ENST00000583067 366 ntBASIC0.03□□□□□ -2.4
LSM1O15116 MIR6740-201ENST00000618268 113 ntBASIC0.03□□□□□ -2.4
LSM1O15116 U6.92-201ENST00000636464 89 ntBASIC0.03□□□□□ -2.4
LSM1O15116 SNORA63C-201ENST00000364578 129 ntBASIC0.02□□□□□ -2.41
LSM1O15116 Y_RNA.393-201ENST00000383936 102 ntBASIC0.02□□□□□ -2.41
LSM1O15116 MIR802-201ENST00000390235 94 ntBASIC0.02□□□□□ -2.41
LSM1O15116 MIR1277-201ENST00000408536 78 ntBASIC0.02□□□□□ -2.41
LSM1O15116 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC0.02□□□□□ -2.41
LSM1O15116 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC0.02□□□□□ -2.41
LSM1O15116 Y_RNA.691-201ENST00000516611 103 ntBASIC0.02□□□□□ -2.41
LSM1O15116 SNORD92-201ENST00000585078 85 ntBASIC0.02□□□□□ -2.41
LSM1O15116 Y_RNA.27-201ENST00000362540 103 ntBASIC0.01□□□□□ -2.41
LSM1O15116 Y_RNA.242-201ENST00000364473 110 ntBASIC0.01□□□□□ -2.41
LSM1O15116 RNU6-708P-201ENST00000384217 107 ntBASIC0.01□□□□□ -2.41
LSM1O15116 RNU6-437P-201ENST00000459408 95 ntBASIC0.01□□□□□ -2.41
LSM1O15116 AC092989.1-201ENST00000481235 277 ntBASIC0.01□□□□□ -2.41
LSM1O15116 DEFB117-201ENST00000602356 141 ntBASIC0.01□□□□□ -2.41
LSM1O15116 U2.1-201ENST00000618978 145 ntBASIC0.01□□□□□ -2.41
LSM1O15116 RNU6-1188P-201ENST00000363795 107 ntBASIC0□□□□□ -2.41
LSM1O15116 RNY3P11-201ENST00000364153 102 ntBASIC0□□□□□ -2.41
LSM1O15116 Y_RNA.436-201ENST00000384097 102 ntBASIC0□□□□□ -2.41
LSM1O15116 Y_RNA.494-201ENST00000384432 111 ntBASIC0□□□□□ -2.41
LSM1O15116 RNU6-310P-201ENST00000384655 107 ntBASIC0□□□□□ -2.41
LSM1O15116 MIR125B2-201ENST00000385128 89 ntBASIC0□□□□□ -2.41
LSM1O15116 MIR1278-201ENST00000408753 81 ntBASIC0□□□□□ -2.41
LSM1O15116 RNU7-102P-201ENST00000458948 62 ntBASIC0□□□□□ -2.41
LSM1O15116 AP003327.1-201ENST00000529684 127 ntBASIC0□□□□□ -2.41
LSM1O15116 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0□□□□□ -2.41
LSM1O15116 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC0□□□□□ -2.41
LSM1O15116 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC0□□□□□ -2.41
LSM1O15116 AC011712.1-201ENST00000588959 234 ntBASIC0□□□□□ -2.41
LSM1O15116 AL355297.3-201ENST00000604082 446 ntBASIC0□□□□□ -2.41
LSM1O15116 RAC1P9-201ENST00000604990 392 ntBASIC0□□□□□ -2.41
LSM1O15116 AC080013.6-201ENST00000606185 215 ntBASIC0□□□□□ -2.41
LSM1O15116 AC010205.1-201ENST00000616668 449 ntBASIC0□□□□□ -2.41
LSM1O15116 PVT1_3.1-201ENST00000620853 95 ntBASIC0□□□□□ -2.41
LSM1O15116 uc_338.16-201ENST00000621804 95 ntBASIC0□□□□□ -2.41
LSM1O15116 RNU4-67P-201ENST00000364569 141 ntBASIC-0.01□□□□□ -2.41
LSM1O15116 Y_RNA.547-201ENST00000384654 119 ntBASIC-0.01□□□□□ -2.41
LSM1O15116 MIR548F1-201ENST00000408667 84 ntBASIC-0.01□□□□□ -2.41
LSM1O15116 AC073261.1-201ENST00000429409 121 ntBASIC-0.01□□□□□ -2.41
LSM1O15116 RNU7-169P-201ENST00000459456 61 ntBASIC-0.01□□□□□ -2.41
LSM1O15116 RNU4ATAC7P-201ENST00000516280 125 ntBASIC-0.01□□□□□ -2.41
LSM1O15116 RNU7-30P-201ENST00000516835 62 ntBASIC-0.01□□□□□ -2.41
LSM1O15116 RNU6-264P-201ENST00000517134 104 ntBASIC-0.01□□□□□ -2.41
LSM1O15116 RPL23AP91-201ENST00000569211 455 ntBASIC-0.01□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 133.7 ms