Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 Y_RNA.110-201ENST00000363220 99 ntBASIC-1.66□□□□□ -2.67
CHD1O14646 Y_RNA.133-201ENST00000363428 110 ntBASIC-1.66□□□□□ -2.67
CHD1O14646 GMFBP1-201ENST00000467831 427 ntBASIC-1.66□□□□□ -2.67
CHD1O14646 AC112204.1-201ENST00000502591 103 ntBASIC-1.66□□□□□ -2.67
CHD1O14646 AL662814.1-201ENST00000617364 121 ntBASIC-1.66□□□□□ -2.67
CHD1O14646 AC006386.1-201ENST00000619436 415 ntBASIC-1.66□□□□□ -2.67
CHD1O14646 AC126544.2-201ENST00000625174 749 ntBASIC-1.66□□□□□ -2.67
CHD1O14646 MTND5P18-201ENST00000445624 1801 ntBASIC-1.66□□□□□ -2.67
CHD1O14646 RNU6-1309P-201ENST00000363305 108 ntBASIC-1.66□□□□□ -2.68
CHD1O14646 RNU6-226P-201ENST00000363778 107 ntBASIC-1.66□□□□□ -2.68
CHD1O14646 MIR518B-201ENST00000385127 83 ntBASIC-1.66□□□□□ -2.68
CHD1O14646 AL445193.1-201ENST00000441183 141 ntBASIC-1.66□□□□□ -2.68
CHD1O14646 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC-1.66□□□□□ -2.68
CHD1O14646 AP003181.2-201ENST00000528941 181 ntBASIC-1.66□□□□□ -2.68
CHD1O14646 RNU4-66P-201ENST00000365199 138 ntBASIC-1.67□□□□□ -2.68
CHD1O14646 Y_RNA.365-201ENST00000365537 102 ntBASIC-1.67□□□□□ -2.68
CHD1O14646 RNU6-1127P-201ENST00000384580 107 ntBASIC-1.67□□□□□ -2.68
CHD1O14646 MIRLET7F2-201ENST00000385277 83 ntBASIC-1.67□□□□□ -2.68
CHD1O14646 RNU7-188P-201ENST00000517063 64 ntBASIC-1.67□□□□□ -2.68
CHD1O14646 MTND4LP18-201ENST00000526864 291 ntBASIC-1.67□□□□□ -2.68
CHD1O14646 MIR3179-1-201ENST00000578940 84 ntBASIC-1.67□□□□□ -2.68
CHD1O14646 MIR3179-2-201ENST00000579107 84 ntBASIC-1.67□□□□□ -2.68
CHD1O14646 MIR3179-3-201ENST00000579566 84 ntBASIC-1.67□□□□□ -2.68
CHD1O14646 MIR4775-201ENST00000581168 75 ntBASIC-1.67□□□□□ -2.68
CHD1O14646 AL356055.1-201ENST00000602528 446 ntBASIC-1.67□□□□□ -2.68
CHD1O14646 AC004223.4-201ENST00000612426 332 ntBASIC-1.67□□□□□ -2.68
CHD1O14646 MIR3179-4-201ENST00000617599 84 ntBASIC-1.67□□□□□ -2.68
CHD1O14646 Z97988.1-201ENST00000637697 135 ntBASIC-1.67□□□□□ -2.68
CHD1O14646 MIR9-2-201ENST00000384838 87 ntBASIC-1.68□□□□□ -2.68
CHD1O14646 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC-1.68□□□□□ -2.68
CHD1O14646 MTND1P24-201ENST00000552175 861 ntBASIC-1.68□□□□□ -2.68
CHD1O14646 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC-1.68□□□□□ -2.68
CHD1O14646 MIR6851-201ENST00000617060 67 ntBASIC-1.68□□□□□ -2.68
CHD1O14646 AC068880.4-201ENST00000623082 495 ntBASIC-1.68□□□□□ -2.68
CHD1O14646 RNU6-1157P-201ENST00000384456 106 ntBASIC-1.69□□□□□ -2.68
CHD1O14646 MIR181B2-201ENST00000385004 89 ntBASIC-1.69□□□□□ -2.68
CHD1O14646 AC074085.1-201ENST00000413598 418 ntBASIC-1.69□□□□□ -2.68
CHD1O14646 AP003072.1-201ENST00000531740 145 ntBASIC-1.69□□□□□ -2.68
CHD1O14646 MRPS18CP4-201ENST00000535821 231 ntBASIC-1.69□□□□□ -2.68
CHD1O14646 RNU6-86P-201ENST00000606534 107 ntBASIC-1.69□□□□□ -2.68
CHD1O14646 AC091912.2-201ENST00000624798 167 ntBASIC-1.69□□□□□ -2.68
CHD1O14646 RNU6-268P-201ENST00000364174 107 ntBASIC-1.69□□□□□ -2.68
CHD1O14646 Y_RNA.539-201ENST00000384635 107 ntBASIC-1.69□□□□□ -2.68
CHD1O14646 AC010655.3-201ENST00000478818 450 ntBASIC-1.69□□□□□ -2.68
CHD1O14646 UBL5P4-201ENST00000562584 236 ntBASIC-1.69□□□□□ -2.68
CHD1O14646 U2.17-201ENST00000611454 95 ntBASIC-1.69□□□□□ -2.68
CHD1O14646 Y_RNA.189-201ENST00000363959 112 ntBASIC-1.7□□□□□ -2.68
CHD1O14646 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC-1.7□□□□□ -2.68
CHD1O14646 MTND1P11-201ENST00000456661 876 ntBASIC-1.7□□□□□ -2.68
CHD1O14646 AC105417.1-201ENST00000514691 285 ntBASIC-1.7□□□□□ -2.68
CHD1O14646 AC024405.2-202ENST00000532731 184 ntBASIC-1.7□□□□□ -2.68
CHD1O14646 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC-1.7□□□□□ -2.68
CHD1O14646 MIR4423-201ENST00000580922 80 ntBASIC-1.7□□□□□ -2.68
CHD1O14646 AC090616.2-202ENST00000584248 222 ntBASIC-1.7□□□□□ -2.68
CHD1O14646 Y_RNA.225-201ENST00000364326 97 ntBASIC-1.71□□□□□ -2.68
CHD1O14646 RNY3P14-201ENST00000384309 102 ntBASIC-1.71□□□□□ -2.68
CHD1O14646 SNORD56B-201ENST00000384713 71 ntBASIC-1.71□□□□□ -2.68
CHD1O14646 SNORD64-201ENST00000386683 67 ntBASIC-1.71□□□□□ -2.68
CHD1O14646 AC108059.2-201ENST00000434626 151 ntBASIC-1.71□□□□□ -2.68
CHD1O14646 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC-1.71□□□□□ -2.68
CHD1O14646 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC-1.71□□□□□ -2.68
CHD1O14646 AC008507.2-201ENST00000588402 1176 ntBASIC-1.71□□□□□ -2.68
CHD1O14646 AP002371.2-201ENST00000624450 503 ntBASIC-1.71□□□□□ -2.68
CHD1O14646 Y_RNA.399-201ENST00000383955 105 ntBASIC-1.71□□□□□ -2.68
CHD1O14646 SNRPGP14-201ENST00000435400 219 ntBASIC-1.71□□□□□ -2.68
CHD1O14646 RNU6-983P-201ENST00000516004 103 ntBASIC-1.71□□□□□ -2.68
CHD1O14646 SCOCP1-201ENST00000554676 349 ntBASIC-1.71□□□□□ -2.68
CHD1O14646 MTCO3P23-201ENST00000561363 289 ntBASIC-1.71□□□□□ -2.68
CHD1O14646 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC-1.71□□□□□ -2.68
CHD1O14646 AC005828.6-201ENST00000606610 232 ntBASIC-1.71□□□□□ -2.68
CHD1O14646 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC-1.71□□□□□ -2.68
CHD1O14646 AL596211.1-201ENST00000569873 2277 ntBASIC-1.71□□□□□ -2.68
CHD1O14646 Y_RNA.12-201ENST00000362393 112 ntBASIC-1.72□□□□□ -2.69
CHD1O14646 SNORD115-32-201ENST00000364079 82 ntBASIC-1.72□□□□□ -2.69
CHD1O14646 RNA5SP245-201ENST00000364239 121 ntBASIC-1.72□□□□□ -2.69
CHD1O14646 Y_RNA.242-201ENST00000364473 110 ntBASIC-1.72□□□□□ -2.69
CHD1O14646 SNORD114-29-201ENST00000364819 70 ntBASIC-1.72□□□□□ -2.69
CHD1O14646 Y_RNA.319-201ENST00000365138 92 ntBASIC-1.72□□□□□ -2.69
CHD1O14646 SNORD115-44-201ENST00000365391 82 ntBASIC-1.72□□□□□ -2.69
CHD1O14646 SNORA20.2-201ENST00000383922 131 ntBASIC-1.72□□□□□ -2.69
CHD1O14646 RNU6-291P-201ENST00000384720 107 ntBASIC-1.72□□□□□ -2.69
CHD1O14646 SNORD41.1-201ENST00000391000 69 ntBASIC-1.72□□□□□ -2.69
CHD1O14646 MIR450B-201ENST00000401182 78 ntBASIC-1.72□□□□□ -2.69
CHD1O14646 RNU6ATAC42P-201ENST00000408637 95 ntBASIC-1.72□□□□□ -2.69
CHD1O14646 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC-1.72□□□□□ -2.69
CHD1O14646 MTATP6P18-201ENST00000417994 673 ntBASIC-1.72□□□□□ -2.69
CHD1O14646 AC009878.1-201ENST00000621819 340 ntBASIC-1.72□□□□□ -2.69
CHD1O14646 Y_RNA.97-201ENST00000363094 102 ntBASIC-1.73□□□□□ -2.69
CHD1O14646 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC-1.73□□□□□ -2.69
CHD1O14646 RNU6-1337P-201ENST00000516525 95 ntBASIC-1.73□□□□□ -2.69
CHD1O14646 AC131281.1-201ENST00000522984 164 ntBASIC-1.73□□□□□ -2.69
CHD1O14646 AC080013.3-201ENST00000606839 578 ntBASIC-1.73□□□□□ -2.69
CHD1O14646 AC064836.2-201ENST00000609491 462 ntBASIC-1.73□□□□□ -2.69
CHD1O14646 AL391834.2-201ENST00000609982 546 ntBASIC-1.73□□□□□ -2.69
CHD1O14646 AL049777.1-201ENST00000622740 518 ntBASIC-1.73□□□□□ -2.69
CHD1O14646 RNU6-708P-201ENST00000384217 107 ntBASIC-1.74□□□□□ -2.69
CHD1O14646 MIR1-2-201ENST00000384961 85 ntBASIC-1.74□□□□□ -2.69
CHD1O14646 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC-1.74□□□□□ -2.69
CHD1O14646 RPS27AP14-201ENST00000422868 454 ntBASIC-1.74□□□□□ -2.69
CHD1O14646 USP9YP12-201ENST00000450481 570 ntBASIC-1.74□□□□□ -2.69
Retrieved 100 of 98,524 protein–RNA pairs in 116.2 ms