Protein–RNA interactions for Protein: O14627

CDX4, Homeobox protein CDX-4, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4O14627 Y_RNA.292-201ENST00000364904 97 ntBASIC1.25□□□□□ -2.21
CDX4O14627 Y_RNA.306-201ENST00000365015 102 ntBASIC1.25□□□□□ -2.21
CDX4O14627 Y_RNA.312-201ENST00000365089 102 ntBASIC1.25□□□□□ -2.21
CDX4O14627 Y_RNA.322-201ENST00000365151 102 ntBASIC1.25□□□□□ -2.21
CDX4O14627 RNU6-1318P-201ENST00000365389 103 ntBASIC1.25□□□□□ -2.21
CDX4O14627 SNORD58.1-201ENST00000391313 66 ntBASIC1.25□□□□□ -2.21
CDX4O14627 AL606517.2-201ENST00000442855 241 ntBASIC1.25□□□□□ -2.21
CDX4O14627 Y_RNA.650-201ENST00000459002 102 ntBASIC1.25□□□□□ -2.21
CDX4O14627 RNU7-34P-201ENST00000459394 64 ntBASIC1.25□□□□□ -2.21
CDX4O14627 AC091021.1-201ENST00000468051 388 ntBASIC1.25□□□□□ -2.21
CDX4O14627 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC1.25□□□□□ -2.21
CDX4O14627 Y_RNA.777-201ENST00000516982 102 ntBASIC1.25□□□□□ -2.21
CDX4O14627 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.25□□□□□ -2.21
CDX4O14627 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC1.25□□□□□ -2.21
CDX4O14627 Y_RNA.771-201ENST00000598668 102 ntBASIC1.25□□□□□ -2.21
CDX4O14627 AC005972.2-201ENST00000604690 348 ntBASIC1.25□□□□□ -2.21
CDX4O14627 AC011921.3-201ENST00000605540 361 ntBASIC1.25□□□□□ -2.21
CDX4O14627 Y_RNA.789-201ENST00000622480 102 ntBASIC1.25□□□□□ -2.21
CDX4O14627 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
CDX4O14627 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.24□□□□□ -2.21
CDX4O14627 AC100821.1-201ENST00000523153 2479 ntBASIC1.24□□□□□ -2.21
CDX4O14627 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
CDX4O14627 RNU4-10P-201ENST00000364383 140 ntBASIC1.24□□□□□ -2.21
CDX4O14627 Y_RNA.552-201ENST00000384665 112 ntBASIC1.24□□□□□ -2.21
CDX4O14627 MIR222-201ENST00000384992 110 ntBASIC1.24□□□□□ -2.21
CDX4O14627 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.24□□□□□ -2.21
CDX4O14627 RN7SKP200-201ENST00000410564 320 ntBASIC1.24□□□□□ -2.21
CDX4O14627 SNORD2.1-201ENST00000458762 69 ntBASIC1.24□□□□□ -2.21
CDX4O14627 RNY3P16-201ENST00000516338 101 ntBASIC1.24□□□□□ -2.21
CDX4O14627 RNU7-115P-201ENST00000516433 55 ntBASIC1.24□□□□□ -2.21
CDX4O14627 AC024405.2-202ENST00000532731 184 ntBASIC1.24□□□□□ -2.21
CDX4O14627 MIR5692C2-201ENST00000577959 77 ntBASIC1.24□□□□□ -2.21
CDX4O14627 MIR4422-201ENST00000581938 83 ntBASIC1.24□□□□□ -2.21
CDX4O14627 MIR4282-201ENST00000583613 67 ntBASIC1.24□□□□□ -2.21
CDX4O14627 POLR3GP1-201ENST00000594073 261 ntBASIC1.24□□□□□ -2.21
CDX4O14627 AP001485.1-201ENST00000604799 199 ntBASIC1.24□□□□□ -2.21
CDX4O14627 AL442067.1-201ENST00000613261 223 ntBASIC1.24□□□□□ -2.21
CDX4O14627 AL078604.3-201ENST00000615580 211 ntBASIC1.24□□□□□ -2.21
CDX4O14627 AC013791.1-201ENST00000616619 62 ntBASIC1.24□□□□□ -2.21
CDX4O14627 AC141273.2-201ENST00000618989 130 ntBASIC1.24□□□□□ -2.21
CDX4O14627 RNU6-899P-201ENST00000363947 107 ntBASIC1.23□□□□□ -2.21
CDX4O14627 Y_RNA.257-201ENST00000364596 102 ntBASIC1.23□□□□□ -2.21
CDX4O14627 Y_RNA.267-201ENST00000364679 109 ntBASIC1.23□□□□□ -2.21
CDX4O14627 Y_RNA.293-201ENST00000364908 93 ntBASIC1.23□□□□□ -2.21
CDX4O14627 RNA5SP109-201ENST00000391010 116 ntBASIC1.23□□□□□ -2.21
CDX4O14627 RN7SKP51-201ENST00000410781 304 ntBASIC1.23□□□□□ -2.21
CDX4O14627 AC245047.3-201ENST00000429428 127 ntBASIC1.23□□□□□ -2.21
CDX4O14627 AC233266.1-201ENST00000454518 96 ntBASIC1.23□□□□□ -2.21
CDX4O14627 RNU4-71P-201ENST00000516258 113 ntBASIC1.23□□□□□ -2.21
CDX4O14627 RNU6-1291P-201ENST00000516591 104 ntBASIC1.23□□□□□ -2.21
CDX4O14627 RNU6-1096P-201ENST00000517089 102 ntBASIC1.23□□□□□ -2.21
CDX4O14627 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.23□□□□□ -2.21
CDX4O14627 AC130289.1-201ENST00000577321 73 ntBASIC1.23□□□□□ -2.21
CDX4O14627 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC1.23□□□□□ -2.21
CDX4O14627 AC091178.2-201ENST00000584401 117 ntBASIC1.23□□□□□ -2.21
CDX4O14627 AC022217.4-201ENST00000604389 163 ntBASIC1.23□□□□□ -2.21
CDX4O14627 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC1.23□□□□□ -2.21
CDX4O14627 AC242852.1-201ENST00000612151 96 ntBASIC1.23□□□□□ -2.21
CDX4O14627 AC073349.3-201ENST00000617616 186 ntBASIC1.23□□□□□ -2.21
CDX4O14627 MIR548AY-201ENST00000617669 107 ntBASIC1.23□□□□□ -2.21
CDX4O14627 AL365265.1-201ENST00000621045 234 ntBASIC1.23□□□□□ -2.21
CDX4O14627 AC244015.1-201ENST00000622301 99 ntBASIC1.23□□□□□ -2.21
CDX4O14627 MIR6079-201ENST00000635807 62 ntBASIC1.23□□□□□ -2.21
CDX4O14627 ICE2P2-201ENST00000483823 2787 ntBASIC1.22□□□□□ -2.21
CDX4O14627 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.22□□□□□ -2.21
CDX4O14627 Y_RNA.205-201ENST00000364128 113 ntBASIC1.22□□□□□ -2.21
CDX4O14627 RNY4P28-201ENST00000365281 93 ntBASIC1.22□□□□□ -2.21
CDX4O14627 RNU6-1323P-201ENST00000384025 107 ntBASIC1.22□□□□□ -2.21
CDX4O14627 Y_RNA.515-201ENST00000384535 112 ntBASIC1.22□□□□□ -2.21
CDX4O14627 Y_RNA.572-201ENST00000384757 98 ntBASIC1.22□□□□□ -2.21
CDX4O14627 SNORA36B-201ENST00000410438 131 ntBASIC1.22□□□□□ -2.21
CDX4O14627 Y_RNA.626-201ENST00000411288 95 ntBASIC1.22□□□□□ -2.21
CDX4O14627 AC108059.2-201ENST00000434626 151 ntBASIC1.22□□□□□ -2.21
CDX4O14627 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC1.22□□□□□ -2.21
CDX4O14627 RPS27P1-201ENST00000450552 247 ntBASIC1.22□□□□□ -2.21
CDX4O14627 HSPE1P24-201ENST00000450782 238 ntBASIC1.22□□□□□ -2.21
CDX4O14627 RPL23AP54-201ENST00000495129 419 ntBASIC1.22□□□□□ -2.21
CDX4O14627 RNA5SP436-201ENST00000516020 115 ntBASIC1.22□□□□□ -2.21
CDX4O14627 AL929325.1-201ENST00000603096 117 ntBASIC1.22□□□□□ -2.21
CDX4O14627 AP003357.1-201ENST00000604497 148 ntBASIC1.22□□□□□ -2.21
CDX4O14627 AC018630.2-201ENST00000534866 2403 ntBASIC1.22□□□□□ -2.21
CDX4O14627 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
CDX4O14627 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.21□□□□□ -2.22
CDX4O14627 RNU6-1123P-201ENST00000362347 106 ntBASIC1.21□□□□□ -2.22
CDX4O14627 RNU6-1205P-201ENST00000363625 106 ntBASIC1.21□□□□□ -2.22
CDX4O14627 Y_RNA.199-201ENST00000364014 102 ntBASIC1.21□□□□□ -2.22
CDX4O14627 AL034345.1-201ENST00000407768 123 ntBASIC1.21□□□□□ -2.22
CDX4O14627 MIR1278-201ENST00000408753 81 ntBASIC1.21□□□□□ -2.22
CDX4O14627 MIR1298-201ENST00000408783 112 ntBASIC1.21□□□□□ -2.22
CDX4O14627 RNU6-955P-201ENST00000410497 104 ntBASIC1.21□□□□□ -2.22
CDX4O14627 RNU6-383P-201ENST00000410864 94 ntBASIC1.21□□□□□ -2.22
CDX4O14627 Y_RNA.621-201ENST00000411065 96 ntBASIC1.21□□□□□ -2.22
CDX4O14627 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.21□□□□□ -2.22
CDX4O14627 RPS29P29-201ENST00000456396 171 ntBASIC1.21□□□□□ -2.22
CDX4O14627 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC1.21□□□□□ -2.22
CDX4O14627 AC127455.1-201ENST00000565496 145 ntBASIC1.21□□□□□ -2.22
CDX4O14627 SNORA77B-201ENST00000578179 125 ntBASIC1.21□□□□□ -2.22
CDX4O14627 AC009779.6-201ENST00000603972 165 ntBASIC1.21□□□□□ -2.22
CDX4O14627 SNORA28-201ENST00000606769 126 ntBASIC1.21□□□□□ -2.22
CDX4O14627 Y_RNA.200-201ENST00000364018 102 ntBASIC1.2□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 218.8 ms