Protein–RNA interactions for Protein: O00555

CACNA1A, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, humanhuman

Predictions only

Length 2,505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1AO00555 AC011352.1-201ENST00000512300 793 ntBASIC-0.44□□□□□ -2.48
CACNA1AO00555 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC-0.44□□□□□ -2.48
CACNA1AO00555 AL391262.2-201ENST00000622466 494 ntBASIC-0.44□□□□□ -2.48
CACNA1AO00555 AL049777.1-201ENST00000622740 518 ntBASIC-0.44□□□□□ -2.48
CACNA1AO00555 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC-0.44□□□□□ -2.48
CACNA1AO00555 RNU6-1115P-201ENST00000362490 106 ntBASIC-0.45□□□□□ -2.48
CACNA1AO00555 Y_RNA.128-201ENST00000363391 112 ntBASIC-0.45□□□□□ -2.48
CACNA1AO00555 Y_RNA.174-201ENST00000363781 105 ntBASIC-0.45□□□□□ -2.48
CACNA1AO00555 RNU6-541P-201ENST00000384709 110 ntBASIC-0.45□□□□□ -2.48
CACNA1AO00555 MIR521-1-201ENST00000384902 87 ntBASIC-0.45□□□□□ -2.48
CACNA1AO00555 MIR450B-201ENST00000401182 78 ntBASIC-0.45□□□□□ -2.48
CACNA1AO00555 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC-0.45□□□□□ -2.48
CACNA1AO00555 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC-0.45□□□□□ -2.48
CACNA1AO00555 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC-0.45□□□□□ -2.48
CACNA1AO00555 MTCO2P27-201ENST00000420740 428 ntBASIC-0.45□□□□□ -2.48
CACNA1AO00555 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC-0.45□□□□□ -2.48
CACNA1AO00555 UBE2D3P4-201ENST00000441973 436 ntBASIC-0.45□□□□□ -2.48
CACNA1AO00555 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC-0.45□□□□□ -2.48
CACNA1AO00555 snoU13.13-201ENST00000458842 104 ntBASIC-0.45□□□□□ -2.48
CACNA1AO00555 AC022137.1-201ENST00000483735 151 ntBASIC-0.45□□□□□ -2.48
CACNA1AO00555 Z84480.1-201ENST00000605131 311 ntBASIC-0.45□□□□□ -2.48
CACNA1AO00555 AC009248.2-201ENST00000619826 254 ntBASIC-0.45□□□□□ -2.48
CACNA1AO00555 Y_RNA.22-201ENST00000362492 102 ntBASIC-0.45□□□□□ -2.48
CACNA1AO00555 SNORA63.5-201ENST00000363548 123 ntBASIC-0.45□□□□□ -2.48
CACNA1AO00555 RNU6-266P-201ENST00000364225 107 ntBASIC-0.45□□□□□ -2.48
CACNA1AO00555 RNY1P12-201ENST00000364251 105 ntBASIC-0.45□□□□□ -2.48
CACNA1AO00555 Y_RNA.253-201ENST00000364562 112 ntBASIC-0.45□□□□□ -2.48
CACNA1AO00555 RNU6-1292P-201ENST00000383856 107 ntBASIC-0.45□□□□□ -2.48
CACNA1AO00555 RNU6-131P-201ENST00000391144 107 ntBASIC-0.45□□□□□ -2.48
CACNA1AO00555 RNU6-1133P-201ENST00000410963 100 ntBASIC-0.45□□□□□ -2.48
CACNA1AO00555 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC-0.45□□□□□ -2.48
CACNA1AO00555 ELOCP4-201ENST00000420090 333 ntBASIC-0.45□□□□□ -2.48
CACNA1AO00555 AC073464.1-201ENST00000429823 534 ntBASIC-0.45□□□□□ -2.48
CACNA1AO00555 SNRPGP10-201ENST00000432323 225 ntBASIC-0.45□□□□□ -2.48
CACNA1AO00555 AL512286.1-201ENST00000439244 400 ntBASIC-0.45□□□□□ -2.48
CACNA1AO00555 AL031667.1-201ENST00000440222 725 ntBASIC-0.45□□□□□ -2.48
CACNA1AO00555 Y_RNA.672-201ENST00000516289 104 ntBASIC-0.45□□□□□ -2.48
CACNA1AO00555 snoU83B.1-201ENST00000517136 88 ntBASIC-0.45□□□□□ -2.48
CACNA1AO00555 RNU7-161P-201ENST00000517289 62 ntBASIC-0.45□□□□□ -2.48
CACNA1AO00555 AC138749.4-201ENST00000563970 127 ntBASIC-0.45□□□□□ -2.48
CACNA1AO00555 MIR6851-201ENST00000617060 67 ntBASIC-0.45□□□□□ -2.48
CACNA1AO00555 AC023510.2-201ENST00000622162 746 ntBASIC-0.45□□□□□ -2.48
CACNA1AO00555 RNU6-1317P-201ENST00000364582 104 ntBASIC-0.46□□□□□ -2.48
CACNA1AO00555 SNORD24-201ENST00000383884 75 ntBASIC-0.46□□□□□ -2.48
CACNA1AO00555 Y_RNA.430-201ENST00000384081 110 ntBASIC-0.46□□□□□ -2.48
CACNA1AO00555 RNU6-434P-201ENST00000384376 107 ntBASIC-0.46□□□□□ -2.48
CACNA1AO00555 Y_RNA.539-201ENST00000384635 107 ntBASIC-0.46□□□□□ -2.48
CACNA1AO00555 MIR617-201ENST00000385030 97 ntBASIC-0.46□□□□□ -2.48
CACNA1AO00555 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC-0.46□□□□□ -2.48
CACNA1AO00555 SNORD41.1-201ENST00000391000 69 ntBASIC-0.46□□□□□ -2.48
CACNA1AO00555 USP9YP16-201ENST00000430287 407 ntBASIC-0.46□□□□□ -2.48
CACNA1AO00555 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC-0.46□□□□□ -2.48
CACNA1AO00555 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC-0.46□□□□□ -2.48
CACNA1AO00555 USP9YP23-201ENST00000455085 407 ntBASIC-0.46□□□□□ -2.48
CACNA1AO00555 RNU6-437P-201ENST00000459408 95 ntBASIC-0.46□□□□□ -2.48
CACNA1AO00555 RNU6-329P-201ENST00000459618 107 ntBASIC-0.46□□□□□ -2.48
CACNA1AO00555 SNORA25.13-201ENST00000516395 103 ntBASIC-0.46□□□□□ -2.48
CACNA1AO00555 SNORD38.3-201ENST00000516599 73 ntBASIC-0.46□□□□□ -2.48
CACNA1AO00555 RNU6-201P-201ENST00000517100 61 ntBASIC-0.46□□□□□ -2.48
CACNA1AO00555 RNA5SP169-201ENST00000517268 117 ntBASIC-0.46□□□□□ -2.48
CACNA1AO00555 AP003733.2-201ENST00000529409 171 ntBASIC-0.46□□□□□ -2.48
CACNA1AO00555 DISC2.1-201ENST00000612827 205 ntBASIC-0.46□□□□□ -2.48
CACNA1AO00555 JPX_2.1-201ENST00000614161 69 ntBASIC-0.46□□□□□ -2.48
CACNA1AO00555 AC099654.12-201ENST00000639868 649 ntBASIC-0.46□□□□□ -2.48
CACNA1AO00555 SNORD50B-201ENST00000364995 70 ntBASIC-0.46□□□□□ -2.48
CACNA1AO00555 RNU6-117P-201ENST00000365415 107 ntBASIC-0.46□□□□□ -2.48
CACNA1AO00555 Y_RNA.368-201ENST00000365547 113 ntBASIC-0.46□□□□□ -2.48
CACNA1AO00555 RNU6-442P-201ENST00000383968 104 ntBASIC-0.46□□□□□ -2.48
CACNA1AO00555 RNU6-784P-201ENST00000384330 106 ntBASIC-0.46□□□□□ -2.48
CACNA1AO00555 SNORD56B-201ENST00000384713 71 ntBASIC-0.46□□□□□ -2.48
CACNA1AO00555 Y_RNA.608-201ENST00000410647 95 ntBASIC-0.46□□□□□ -2.48
CACNA1AO00555 RNU4-55P-201ENST00000410731 137 ntBASIC-0.46□□□□□ -2.48
CACNA1AO00555 AC244505.6-201ENST00000452829 130 ntBASIC-0.46□□□□□ -2.48
CACNA1AO00555 MTND2P30-201ENST00000456663 382 ntBASIC-0.46□□□□□ -2.48
CACNA1AO00555 RNU7-55P-201ENST00000459426 62 ntBASIC-0.46□□□□□ -2.48
CACNA1AO00555 Y_RNA.648-201ENST00000459455 110 ntBASIC-0.46□□□□□ -2.48
CACNA1AO00555 MTCO1P29-201ENST00000496868 288 ntBASIC-0.46□□□□□ -2.48
CACNA1AO00555 RNU2-69P-201ENST00000516061 100 ntBASIC-0.46□□□□□ -2.48
CACNA1AO00555 FRG2DP-202ENST00000566967 323 ntBASIC-0.46□□□□□ -2.48
CACNA1AO00555 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC-0.46□□□□□ -2.48
CACNA1AO00555 AP001282.2-201ENST00000616149 309 ntBASIC-0.46□□□□□ -2.48
CACNA1AO00555 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC-0.46□□□□□ -2.48
CACNA1AO00555 RNU6-865P-201ENST00000364772 107 ntBASIC-0.47□□□□□ -2.48
CACNA1AO00555 SNORD116-9-201ENST00000384000 95 ntBASIC-0.47□□□□□ -2.48
CACNA1AO00555 RNU6-1029P-201ENST00000384109 107 ntBASIC-0.47□□□□□ -2.48
CACNA1AO00555 RNU6-533P-201ENST00000384144 107 ntBASIC-0.47□□□□□ -2.48
CACNA1AO00555 SNORD116-3-201ENST00000384287 95 ntBASIC-0.47□□□□□ -2.48
CACNA1AO00555 SNORD116-8-201ENST00000384365 95 ntBASIC-0.47□□□□□ -2.48
CACNA1AO00555 SNORD116-7-201ENST00000384404 95 ntBASIC-0.47□□□□□ -2.48
CACNA1AO00555 SNORD116-5-201ENST00000384462 95 ntBASIC-0.47□□□□□ -2.48
CACNA1AO00555 SNORD116-12-201ENST00000384468 92 ntBASIC-0.47□□□□□ -2.48
CACNA1AO00555 SNORA72.6-201ENST00000384520 129 ntBASIC-0.47□□□□□ -2.48
CACNA1AO00555 SNORD12C-201ENST00000386307 89 ntBASIC-0.47□□□□□ -2.48
CACNA1AO00555 MT-TF-201ENST00000387314 71 ntBASIC-0.47□□□□□ -2.48
CACNA1AO00555 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-0.47□□□□□ -2.48
CACNA1AO00555 MTND1P11-201ENST00000456661 876 ntBASIC-0.47□□□□□ -2.48
CACNA1AO00555 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC-0.47□□□□□ -2.48
CACNA1AO00555 PRDX4P1-201ENST00000507189 574 ntBASIC-0.47□□□□□ -2.48
CACNA1AO00555 Y_RNA.683-201ENST00000516508 93 ntBASIC-0.47□□□□□ -2.48
CACNA1AO00555 RNU6-958P-201ENST00000516995 106 ntBASIC-0.47□□□□□ -2.48
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms