Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 Y_RNA.237-201ENST00000364439 102 ntBASIC1.24□□□□□ -2.21
O00370 Y_RNA.376-201ENST00000365638 108 ntBASIC1.24□□□□□ -2.21
O00370 MIR526A1-201ENST00000384897 85 ntBASIC1.24□□□□□ -2.21
O00370 MIR618-201ENST00000385287 98 ntBASIC1.24□□□□□ -2.21
O00370 MIR1302-6-201ENST00000408466 90 ntBASIC1.24□□□□□ -2.21
O00370 MIR1285-1-201ENST00000408593 84 ntBASIC1.24□□□□□ -2.21
O00370 RNU6-383P-201ENST00000410864 94 ntBASIC1.24□□□□□ -2.21
O00370 RPL39P38-201ENST00000467018 153 ntBASIC1.24□□□□□ -2.21
O00370 AL133373.1-201ENST00000497098 94 ntBASIC1.24□□□□□ -2.21
O00370 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC1.24□□□□□ -2.21
O00370 SERF1AP1-201ENST00000514575 187 ntBASIC1.24□□□□□ -2.21
O00370 RNU6-327P-201ENST00000516270 127 ntBASIC1.24□□□□□ -2.21
O00370 MIR367-201ENST00000362299 68 ntBASIC1.23□□□□□ -2.21
O00370 Y_RNA.176-201ENST00000363815 109 ntBASIC1.23□□□□□ -2.21
O00370 SNORD14E-201ENST00000364009 85 ntBASIC1.23□□□□□ -2.21
O00370 U8.5-201ENST00000364528 136 ntBASIC1.23□□□□□ -2.21
O00370 Y_RNA.483-201ENST00000384380 101 ntBASIC1.23□□□□□ -2.21
O00370 Y_RNA.574-201ENST00000384766 95 ntBASIC1.23□□□□□ -2.21
O00370 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.23□□□□□ -2.21
O00370 MTND2P23-201ENST00000422990 651 ntBASIC1.23□□□□□ -2.21
O00370 AC007742.2-201ENST00000618226 398 ntBASIC1.23□□□□□ -2.21
O00370 Y_RNA.116-201ENST00000363292 103 ntBASIC1.22□□□□□ -2.21
O00370 Y_RNA.117-201ENST00000363294 101 ntBASIC1.22□□□□□ -2.21
O00370 RNU6-833P-201ENST00000363486 107 ntBASIC1.22□□□□□ -2.21
O00370 SNORD50B-201ENST00000364995 70 ntBASIC1.22□□□□□ -2.21
O00370 MIR452-201ENST00000385020 85 ntBASIC1.22□□□□□ -2.21
O00370 MIR1298-201ENST00000408783 112 ntBASIC1.22□□□□□ -2.21
O00370 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC1.22□□□□□ -2.21
O00370 RNA5SP102-201ENST00000516865 106 ntBASIC1.22□□□□□ -2.21
O00370 AC090049.2-201ENST00000550377 109 ntBASIC1.22□□□□□ -2.21
O00370 AC136443.5-201ENST00000603741 370 ntBASIC1.22□□□□□ -2.21
O00370 MIR6078-201ENST00000611069 100 ntBASIC1.22□□□□□ -2.21
O00370 AC027279.3-201ENST00000625055 122 ntBASIC1.22□□□□□ -2.21
O00370 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.22□□□□□ -2.21
O00370 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC1.21□□□□□ -2.22
O00370 Y_RNA.14-201ENST00000362415 103 ntBASIC1.21□□□□□ -2.22
O00370 Y_RNA.796-201ENST00000364268 102 ntBASIC1.21□□□□□ -2.22
O00370 RNU4-10P-201ENST00000364383 140 ntBASIC1.21□□□□□ -2.22
O00370 Y_RNA.799-201ENST00000364992 102 ntBASIC1.21□□□□□ -2.22
O00370 SNORA2.2-201ENST00000365473 135 ntBASIC1.21□□□□□ -2.22
O00370 RNU6-738P-201ENST00000384531 106 ntBASIC1.21□□□□□ -2.22
O00370 AL591704.2-201ENST00000421658 181 ntBASIC1.21□□□□□ -2.22
O00370 Y_RNA.637-201ENST00000459424 114 ntBASIC1.21□□□□□ -2.22
O00370 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.21□□□□□ -2.22
O00370 SCARNA15.1-201ENST00000516384 125 ntBASIC1.21□□□□□ -2.22
O00370 SNORD111.1-201ENST00000516421 86 ntBASIC1.21□□□□□ -2.22
O00370 SNORA27.4-201ENST00000516650 95 ntBASIC1.21□□□□□ -2.22
O00370 MIR3664-201ENST00000579074 99 ntBASIC1.21□□□□□ -2.22
O00370 MIR4762-201ENST00000585261 75 ntBASIC1.21□□□□□ -2.22
O00370 MIR6504-201ENST00000613520 61 ntBASIC1.21□□□□□ -2.22
O00370 AP001282.2-201ENST00000616149 309 ntBASIC1.21□□□□□ -2.22
O00370 AC013791.1-201ENST00000616619 62 ntBASIC1.21□□□□□ -2.22
O00370 U6.104-201ENST00000637979 90 ntBASIC1.21□□□□□ -2.22
O00370 Y_RNA.47-201ENST00000362697 108 ntBASIC1.2□□□□□ -2.22
O00370 Y_RNA.54-201ENST00000362766 105 ntBASIC1.2□□□□□ -2.22
O00370 Y_RNA.122-201ENST00000363331 96 ntBASIC1.2□□□□□ -2.22
O00370 Y_RNA.149-201ENST00000363558 117 ntBASIC1.2□□□□□ -2.22
O00370 Y_RNA.162-201ENST00000363683 102 ntBASIC1.2□□□□□ -2.22
O00370 RNU6-1289P-201ENST00000384431 106 ntBASIC1.2□□□□□ -2.22
O00370 SNORD41-201ENST00000386967 70 ntBASIC1.2□□□□□ -2.22
O00370 HMGN2P32-201ENST00000444648 269 ntBASIC1.2□□□□□ -2.22
O00370 RPS29P28-201ENST00000446439 141 ntBASIC1.2□□□□□ -2.22
O00370 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.2□□□□□ -2.22
O00370 AL117187.1-201ENST00000555482 181 ntBASIC1.2□□□□□ -2.22
O00370 MIR2681-201ENST00000581814 105 ntBASIC1.2□□□□□ -2.22
O00370 AC006006.1-201ENST00000603082 144 ntBASIC1.2□□□□□ -2.22
O00370 AL513534.2-201ENST00000603836 250 ntBASIC1.2□□□□□ -2.22
O00370 AL008718.3-201ENST00000610217 321 ntBASIC1.2□□□□□ -2.22
O00370 GHRLOS.1-201ENST00000610995 70 ntBASIC1.2□□□□□ -2.22
O00370 MIR8062-201ENST00000621515 85 ntBASIC1.2□□□□□ -2.22
O00370 snoU18.1-201ENST00000629629 71 ntBASIC1.2□□□□□ -2.22
O00370 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
O00370 Y_RNA.44-201ENST00000362676 108 ntBASIC1.19□□□□□ -2.22
O00370 Y_RNA.396-201ENST00000383949 103 ntBASIC1.19□□□□□ -2.22
O00370 MIR222-201ENST00000384992 110 ntBASIC1.19□□□□□ -2.22
O00370 MIR518E-201ENST00000385252 88 ntBASIC1.19□□□□□ -2.22
O00370 MT-TW-201ENST00000387382 68 ntBASIC1.19□□□□□ -2.22
O00370 MIR548F4-201ENST00000408515 105 ntBASIC1.19□□□□□ -2.22
O00370 RPL39P39-201ENST00000455840 151 ntBASIC1.19□□□□□ -2.22
O00370 NDUFA4P2-201ENST00000489989 244 ntBASIC1.19□□□□□ -2.22
O00370 Y_RNA.679-201ENST00000516416 91 ntBASIC1.19□□□□□ -2.22
O00370 SNORA18.7-201ENST00000516910 131 ntBASIC1.19□□□□□ -2.22
O00370 MIR5692C2-201ENST00000577959 77 ntBASIC1.19□□□□□ -2.22
O00370 AL049861.1-201ENST00000603130 150 ntBASIC1.19□□□□□ -2.22
O00370 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
O00370 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
O00370 Y_RNA.336-201ENST00000365307 109 ntBASIC1.18□□□□□ -2.22
O00370 SNORD72-201ENST00000390994 80 ntBASIC1.18□□□□□ -2.22
O00370 AC023449.1-201ENST00000454464 154 ntBASIC1.18□□□□□ -2.22
O00370 RNU6-165P-201ENST00000517170 99 ntBASIC1.18□□□□□ -2.22
O00370 AC090142.3-201ENST00000519012 385 ntBASIC1.18□□□□□ -2.22
O00370 MIR4724-201ENST00000579485 89 ntBASIC1.18□□□□□ -2.22
O00370 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.18□□□□□ -2.22
O00370 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
O00370 AC068700.1-201ENST00000565862 3754 ntBASIC1.17□□□□□ -2.22
O00370 Y_RNA.217-201ENST00000364214 105 ntBASIC1.17□□□□□ -2.22
O00370 Y_RNA.275-201ENST00000364726 110 ntBASIC1.17□□□□□ -2.22
O00370 RNU6-740P-201ENST00000364734 105 ntBASIC1.17□□□□□ -2.22
O00370 RNU6-442P-201ENST00000383968 104 ntBASIC1.17□□□□□ -2.22
O00370 RNU6-211P-201ENST00000384047 107 ntBASIC1.17□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 161.9 ms