Protein–RNA interactions for Protein: E9PL57

NEDD8-MDP1, NEDD8-MDP1 readthrough (Fragment), humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1E9PL57 RNU6-763P-201ENST00000390865 106 ntBASIC1.04□□□□□ -2.24
NEDD8-MDP1E9PL57 MRPL35P3-201ENST00000421557 364 ntBASIC1.04□□□□□ -2.24
NEDD8-MDP1E9PL57 RNU6-437P-201ENST00000459408 95 ntBASIC1.04□□□□□ -2.24
NEDD8-MDP1E9PL57 AC019288.1-201ENST00000557918 224 ntBASIC1.04□□□□□ -2.24
NEDD8-MDP1E9PL57 AC005357.1-201ENST00000588399 301 ntBASIC1.04□□□□□ -2.24
NEDD8-MDP1E9PL57 AL357312.1-201ENST00000603879 298 ntBASIC1.04□□□□□ -2.24
NEDD8-MDP1E9PL57 AL096861.1-201ENST00000610899 123 ntBASIC1.04□□□□□ -2.24
NEDD8-MDP1E9PL57 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
NEDD8-MDP1E9PL57 snoU2-30.1-201ENST00000365012 70 ntBASIC1.03□□□□□ -2.24
NEDD8-MDP1E9PL57 RNU6-326P-201ENST00000365480 107 ntBASIC1.03□□□□□ -2.24
NEDD8-MDP1E9PL57 RNU6-639P-201ENST00000384074 107 ntBASIC1.03□□□□□ -2.24
NEDD8-MDP1E9PL57 MIR516B2-201ENST00000385190 85 ntBASIC1.03□□□□□ -2.24
NEDD8-MDP1E9PL57 SNRPGP14-201ENST00000435400 219 ntBASIC1.03□□□□□ -2.24
NEDD8-MDP1E9PL57 AC245047.7-201ENST00000440265 293 ntBASIC1.03□□□□□ -2.24
NEDD8-MDP1E9PL57 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC1.03□□□□□ -2.24
NEDD8-MDP1E9PL57 SNORA31.2-201ENST00000516019 134 ntBASIC1.03□□□□□ -2.24
NEDD8-MDP1E9PL57 RNU6-1143P-201ENST00000516125 104 ntBASIC1.03□□□□□ -2.24
NEDD8-MDP1E9PL57 RNU2-31P-201ENST00000516954 155 ntBASIC1.03□□□□□ -2.24
NEDD8-MDP1E9PL57 AP003733.2-201ENST00000529409 171 ntBASIC1.03□□□□□ -2.24
NEDD8-MDP1E9PL57 MIR3192-201ENST00000584920 77 ntBASIC1.03□□□□□ -2.24
NEDD8-MDP1E9PL57 AC027335.2-201ENST00000624030 375 ntBASIC1.03□□□□□ -2.24
NEDD8-MDP1E9PL57 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.03□□□□□ -2.24
NEDD8-MDP1E9PL57 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.24
NEDD8-MDP1E9PL57 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.02□□□□□ -2.25
NEDD8-MDP1E9PL57 Y_RNA.16-201ENST00000362421 102 ntBASIC1.02□□□□□ -2.25
NEDD8-MDP1E9PL57 Y_RNA.84-201ENST00000363011 104 ntBASIC1.02□□□□□ -2.25
NEDD8-MDP1E9PL57 Y_RNA.152-201ENST00000363578 100 ntBASIC1.02□□□□□ -2.25
NEDD8-MDP1E9PL57 RNU6-899P-201ENST00000363947 107 ntBASIC1.02□□□□□ -2.25
NEDD8-MDP1E9PL57 RNU4-38P-201ENST00000364472 129 ntBASIC1.02□□□□□ -2.25
NEDD8-MDP1E9PL57 MTCO2P33-201ENST00000402100 465 ntBASIC1.02□□□□□ -2.25
NEDD8-MDP1E9PL57 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.02□□□□□ -2.25
NEDD8-MDP1E9PL57 AC113618.1-201ENST00000416747 285 ntBASIC1.02□□□□□ -2.25
NEDD8-MDP1E9PL57 AL731563.1-201ENST00000442202 214 ntBASIC1.02□□□□□ -2.25
NEDD8-MDP1E9PL57 RNU6-947P-201ENST00000516264 106 ntBASIC1.02□□□□□ -2.25
NEDD8-MDP1E9PL57 Y_RNA.714-201ENST00000517065 90 ntBASIC1.02□□□□□ -2.25
NEDD8-MDP1E9PL57 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC1.02□□□□□ -2.25
NEDD8-MDP1E9PL57 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.02□□□□□ -2.25
NEDD8-MDP1E9PL57 AL022345.2-201ENST00000606307 135 ntBASIC1.02□□□□□ -2.25
NEDD8-MDP1E9PL57 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC1.02□□□□□ -2.25
NEDD8-MDP1E9PL57 RMST_2.1-201ENST00000617263 136 ntBASIC1.02□□□□□ -2.25
NEDD8-MDP1E9PL57 SNORA25-201ENST00000384384 134 ntBASIC1.01□□□□□ -2.25
NEDD8-MDP1E9PL57 MIR136-201ENST00000385207 82 ntBASIC1.01□□□□□ -2.25
NEDD8-MDP1E9PL57 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.01□□□□□ -2.25
NEDD8-MDP1E9PL57 HMGN2P32-201ENST00000444648 269 ntBASIC1.01□□□□□ -2.25
NEDD8-MDP1E9PL57 SNORD11-201ENST00000459124 84 ntBASIC1.01□□□□□ -2.25
NEDD8-MDP1E9PL57 OR2A41P-201ENST00000473586 105 ntBASIC1.01□□□□□ -2.25
NEDD8-MDP1E9PL57 AC091959.1-201ENST00000495857 238 ntBASIC1.01□□□□□ -2.25
NEDD8-MDP1E9PL57 SNORD116-28-201ENST00000516123 91 ntBASIC1.01□□□□□ -2.25
NEDD8-MDP1E9PL57 SNORA74.3-201ENST00000517108 154 ntBASIC1.01□□□□□ -2.25
NEDD8-MDP1E9PL57 RNA5SP404-201ENST00000517118 132 ntBASIC1.01□□□□□ -2.25
NEDD8-MDP1E9PL57 MIR2681-201ENST00000581814 105 ntBASIC1.01□□□□□ -2.25
NEDD8-MDP1E9PL57 PRELID3BP2-201ENST00000605362 201 ntBASIC1.01□□□□□ -2.25
NEDD8-MDP1E9PL57 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1□□□□□ -2.25
NEDD8-MDP1E9PL57 Y_RNA.217-201ENST00000364214 105 ntBASIC1□□□□□ -2.25
NEDD8-MDP1E9PL57 Y_RNA.326-201ENST00000365176 113 ntBASIC1□□□□□ -2.25
NEDD8-MDP1E9PL57 SNORA70.7-201ENST00000384159 133 ntBASIC1□□□□□ -2.25
NEDD8-MDP1E9PL57 RNU6-1109P-201ENST00000391187 107 ntBASIC1□□□□□ -2.25
NEDD8-MDP1E9PL57 AL603910.2-201ENST00000407268 136 ntBASIC1□□□□□ -2.25
NEDD8-MDP1E9PL57 MTND5P22-201ENST00000458380 195 ntBASIC1□□□□□ -2.25
NEDD8-MDP1E9PL57 Y_RNA.641-201ENST00000459414 105 ntBASIC1□□□□□ -2.25
NEDD8-MDP1E9PL57 RPS26P48-201ENST00000491713 339 ntBASIC1□□□□□ -2.25
NEDD8-MDP1E9PL57 SNORA27.4-201ENST00000516650 95 ntBASIC1□□□□□ -2.25
NEDD8-MDP1E9PL57 AP003072.1-201ENST00000531740 145 ntBASIC1□□□□□ -2.25
NEDD8-MDP1E9PL57 RPL23AP91-201ENST00000569211 455 ntBASIC1□□□□□ -2.25
NEDD8-MDP1E9PL57 AC008507.4-201ENST00000585464 127 ntBASIC1□□□□□ -2.25
NEDD8-MDP1E9PL57 AC087685.1-201ENST00000587507 141 ntBASIC1□□□□□ -2.25
NEDD8-MDP1E9PL57 HSPE1P19-201ENST00000603327 295 ntBASIC1□□□□□ -2.25
NEDD8-MDP1E9PL57 AC103810.9-201ENST00000606688 112 ntBASIC1□□□□□ -2.25
NEDD8-MDP1E9PL57 BX284668.6-201ENST00000606899 438 ntBASIC1□□□□□ -2.25
NEDD8-MDP1E9PL57 JPX_2.1-201ENST00000614161 69 ntBASIC1□□□□□ -2.25
NEDD8-MDP1E9PL57 AC013791.1-201ENST00000616619 62 ntBASIC1□□□□□ -2.25
NEDD8-MDP1E9PL57 RNU6-1272P-201ENST00000362776 107 ntBASIC0.99□□□□□ -2.25
NEDD8-MDP1E9PL57 SNORA22-201ENST00000383907 134 ntBASIC0.99□□□□□ -2.25
NEDD8-MDP1E9PL57 RNU6-144P-201ENST00000383951 107 ntBASIC0.99□□□□□ -2.25
NEDD8-MDP1E9PL57 RNU6-662P-201ENST00000384253 104 ntBASIC0.99□□□□□ -2.25
NEDD8-MDP1E9PL57 SNORA22C-201ENST00000384614 134 ntBASIC0.99□□□□□ -2.25
NEDD8-MDP1E9PL57 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.99□□□□□ -2.25
NEDD8-MDP1E9PL57 RNU6-910P-201ENST00000390844 107 ntBASIC0.99□□□□□ -2.25
NEDD8-MDP1E9PL57 RNU6-1203P-201ENST00000410703 110 ntBASIC0.99□□□□□ -2.25
NEDD8-MDP1E9PL57 RNU6-1338P-201ENST00000516328 91 ntBASIC0.99□□□□□ -2.25
NEDD8-MDP1E9PL57 SNORA70.22-201ENST00000517160 124 ntBASIC0.99□□□□□ -2.25
NEDD8-MDP1E9PL57 AP003716.2-201ENST00000528260 108 ntBASIC0.99□□□□□ -2.25
NEDD8-MDP1E9PL57 AL512605.2-201ENST00000592972 256 ntBASIC0.99□□□□□ -2.25
NEDD8-MDP1E9PL57 AL391903.3-201ENST00000612158 163 ntBASIC0.99□□□□□ -2.25
NEDD8-MDP1E9PL57 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.99□□□□□ -2.25
NEDD8-MDP1E9PL57 AC007742.2-201ENST00000618226 398 ntBASIC0.99□□□□□ -2.25
NEDD8-MDP1E9PL57 UBE2WP1-201ENST00000362030 340 ntBASIC0.98□□□□□ -2.25
NEDD8-MDP1E9PL57 RNU6-268P-201ENST00000364174 107 ntBASIC0.98□□□□□ -2.25
NEDD8-MDP1E9PL57 Y_RNA.466-201ENST00000384294 113 ntBASIC0.98□□□□□ -2.25
NEDD8-MDP1E9PL57 SNORD72-201ENST00000390994 80 ntBASIC0.98□□□□□ -2.25
NEDD8-MDP1E9PL57 SNORA53-201ENST00000391141 249 ntBASIC0.98□□□□□ -2.25
NEDD8-MDP1E9PL57 MTND4LP30-201ENST00000454092 297 ntBASIC0.98□□□□□ -2.25
NEDD8-MDP1E9PL57 RPL39P39-201ENST00000455840 151 ntBASIC0.98□□□□□ -2.25
NEDD8-MDP1E9PL57 SNORD123-201ENST00000459473 70 ntBASIC0.98□□□□□ -2.25
NEDD8-MDP1E9PL57 SNORA31.4-201ENST00000516049 129 ntBASIC0.98□□□□□ -2.25
NEDD8-MDP1E9PL57 SNORD79.1-201ENST00000516069 84 ntBASIC0.98□□□□□ -2.25
NEDD8-MDP1E9PL57 SNORD111.1-201ENST00000516421 86 ntBASIC0.98□□□□□ -2.25
NEDD8-MDP1E9PL57 SNORA18.7-201ENST00000516910 131 ntBASIC0.98□□□□□ -2.25
NEDD8-MDP1E9PL57 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC0.98□□□□□ -2.25
NEDD8-MDP1E9PL57 MIR5692C2-201ENST00000577959 77 ntBASIC0.98□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 166 ms