Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 Y_RNA.48-201ENST00000362710 103 ntBASIC-0.52□□□□□ -2.49
TCRBV4S1A1TA0A5B7 RNU6-740P-201ENST00000364734 105 ntBASIC-0.52□□□□□ -2.49
TCRBV4S1A1TA0A5B7 RNU6-652P-201ENST00000365488 107 ntBASIC-0.52□□□□□ -2.49
TCRBV4S1A1TA0A5B7 Y_RNA.358-201ENST00000365491 99 ntBASIC-0.52□□□□□ -2.49
TCRBV4S1A1TA0A5B7 RNU4-55P-201ENST00000410731 137 ntBASIC-0.52□□□□□ -2.49
TCRBV4S1A1TA0A5B7 RN7SKP142-201ENST00000411236 328 ntBASIC-0.52□□□□□ -2.49
TCRBV4S1A1TA0A5B7 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC-0.52□□□□□ -2.49
TCRBV4S1A1TA0A5B7 MTCO1P5-201ENST00000433573 344 ntBASIC-0.52□□□□□ -2.49
TCRBV4S1A1TA0A5B7 CHEK2P4-201ENST00000450340 246 ntBASIC-0.52□□□□□ -2.49
TCRBV4S1A1TA0A5B7 MTND3P3-201ENST00000505004 126 ntBASIC-0.52□□□□□ -2.49
TCRBV4S1A1TA0A5B7 AC011352.1-201ENST00000512300 793 ntBASIC-0.52□□□□□ -2.49
TCRBV4S1A1TA0A5B7 RNU6-180P-201ENST00000516697 61 ntBASIC-0.52□□□□□ -2.49
TCRBV4S1A1TA0A5B7 MIR5701-3-201ENST00000578890 82 ntBASIC-0.52□□□□□ -2.49
TCRBV4S1A1TA0A5B7 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC-0.52□□□□□ -2.49
TCRBV4S1A1TA0A5B7 MIR5701-1-201ENST00000585138 82 ntBASIC-0.52□□□□□ -2.49
TCRBV4S1A1TA0A5B7 AC008507.4-201ENST00000585464 127 ntBASIC-0.52□□□□□ -2.49
TCRBV4S1A1TA0A5B7 AC006441.5-201ENST00000612680 209 ntBASIC-0.52□□□□□ -2.49
TCRBV4S1A1TA0A5B7 MIR5701-2-201ENST00000615634 82 ntBASIC-0.52□□□□□ -2.49
TCRBV4S1A1TA0A5B7 RNU6-1059P-201ENST00000363752 98 ntBASIC-0.53□□□□□ -2.49
TCRBV4S1A1TA0A5B7 Y_RNA.203-201ENST00000364106 102 ntBASIC-0.53□□□□□ -2.49
TCRBV4S1A1TA0A5B7 Y_RNA.212-201ENST00000364177 102 ntBASIC-0.53□□□□□ -2.49
TCRBV4S1A1TA0A5B7 RNU6-1229P-201ENST00000364295 107 ntBASIC-0.53□□□□□ -2.49
TCRBV4S1A1TA0A5B7 RNU6-1322P-201ENST00000364309 107 ntBASIC-0.53□□□□□ -2.49
TCRBV4S1A1TA0A5B7 RNU5A-2P-201ENST00000384337 116 ntBASIC-0.53□□□□□ -2.49
TCRBV4S1A1TA0A5B7 Y_RNA.494-201ENST00000384432 111 ntBASIC-0.53□□□□□ -2.49
TCRBV4S1A1TA0A5B7 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.53□□□□□ -2.49
TCRBV4S1A1TA0A5B7 SNORD28-201ENST00000384706 75 ntBASIC-0.53□□□□□ -2.49
TCRBV4S1A1TA0A5B7 SNORD72-201ENST00000390994 80 ntBASIC-0.53□□□□□ -2.49
TCRBV4S1A1TA0A5B7 RNU6-192P-201ENST00000391253 100 ntBASIC-0.53□□□□□ -2.49
TCRBV4S1A1TA0A5B7 SNORA75.4-201ENST00000391278 119 ntBASIC-0.53□□□□□ -2.49
TCRBV4S1A1TA0A5B7 RNA5SP25-201ENST00000410815 110 ntBASIC-0.53□□□□□ -2.49
TCRBV4S1A1TA0A5B7 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC-0.53□□□□□ -2.49
TCRBV4S1A1TA0A5B7 RNU7-87P-201ENST00000459343 62 ntBASIC-0.53□□□□□ -2.49
TCRBV4S1A1TA0A5B7 RNU6-256P-201ENST00000516747 97 ntBASIC-0.53□□□□□ -2.49
TCRBV4S1A1TA0A5B7 SCARNA1-201ENST00000517138 166 ntBASIC-0.53□□□□□ -2.49
TCRBV4S1A1TA0A5B7 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC-0.53□□□□□ -2.49
TCRBV4S1A1TA0A5B7 MIR3672-201ENST00000584290 82 ntBASIC-0.53□□□□□ -2.49
TCRBV4S1A1TA0A5B7 AC245884.10-201ENST00000597355 337 ntBASIC-0.53□□□□□ -2.49
TCRBV4S1A1TA0A5B7 MIR8055-201ENST00000610739 97 ntBASIC-0.53□□□□□ -2.49
TCRBV4S1A1TA0A5B7 JPX_2.1-201ENST00000614161 69 ntBASIC-0.53□□□□□ -2.49
TCRBV4S1A1TA0A5B7 Y_RNA.373-201ENST00000365600 103 ntBASIC-0.54□□□□□ -2.5
TCRBV4S1A1TA0A5B7 RNU6-913P-201ENST00000390913 95 ntBASIC-0.54□□□□□ -2.5
TCRBV4S1A1TA0A5B7 AL603910.2-201ENST00000407268 136 ntBASIC-0.54□□□□□ -2.5
TCRBV4S1A1TA0A5B7 RNU4-83P-201ENST00000410863 133 ntBASIC-0.54□□□□□ -2.5
TCRBV4S1A1TA0A5B7 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC-0.54□□□□□ -2.5
TCRBV4S1A1TA0A5B7 UBE2V1P7-201ENST00000446395 340 ntBASIC-0.54□□□□□ -2.5
TCRBV4S1A1TA0A5B7 RNU6-135P-201ENST00000516769 101 ntBASIC-0.54□□□□□ -2.5
TCRBV4S1A1TA0A5B7 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC-0.54□□□□□ -2.5
TCRBV4S1A1TA0A5B7 POLR3GP1-201ENST00000594073 261 ntBASIC-0.54□□□□□ -2.5
TCRBV4S1A1TA0A5B7 AC073648.5-201ENST00000603502 305 ntBASIC-0.54□□□□□ -2.5
TCRBV4S1A1TA0A5B7 AC011921.3-201ENST00000605540 361 ntBASIC-0.54□□□□□ -2.5
TCRBV4S1A1TA0A5B7 Y_RNA.101-201ENST00000363154 102 ntBASIC-0.55□□□□□ -2.5
TCRBV4S1A1TA0A5B7 RNU6-1209P-201ENST00000363655 107 ntBASIC-0.55□□□□□ -2.5
TCRBV4S1A1TA0A5B7 Y_RNA.174-201ENST00000363781 105 ntBASIC-0.55□□□□□ -2.5
TCRBV4S1A1TA0A5B7 Y_RNA.296-201ENST00000364930 108 ntBASIC-0.55□□□□□ -2.5
TCRBV4S1A1TA0A5B7 RNY4P3-201ENST00000365254 95 ntBASIC-0.55□□□□□ -2.5
TCRBV4S1A1TA0A5B7 Y_RNA.409-201ENST00000383990 98 ntBASIC-0.55□□□□□ -2.5
TCRBV4S1A1TA0A5B7 RNU6-842P-201ENST00000384269 107 ntBASIC-0.55□□□□□ -2.5
TCRBV4S1A1TA0A5B7 Y_RNA.518-201ENST00000384552 113 ntBASIC-0.55□□□□□ -2.5
TCRBV4S1A1TA0A5B7 RNA5SP300-201ENST00000391197 107 ntBASIC-0.55□□□□□ -2.5
TCRBV4S1A1TA0A5B7 Y_RNA.615-201ENST00000410769 117 ntBASIC-0.55□□□□□ -2.5
TCRBV4S1A1TA0A5B7 RNU6-1068P-201ENST00000410958 103 ntBASIC-0.55□□□□□ -2.5
TCRBV4S1A1TA0A5B7 RNU6-602P-201ENST00000411155 105 ntBASIC-0.55□□□□□ -2.5
TCRBV4S1A1TA0A5B7 AL445567.1-201ENST00000439121 144 ntBASIC-0.55□□□□□ -2.5
TCRBV4S1A1TA0A5B7 RNU7-67P-201ENST00000459003 62 ntBASIC-0.55□□□□□ -2.5
TCRBV4S1A1TA0A5B7 RNU6-408P-201ENST00000515910 100 ntBASIC-0.55□□□□□ -2.5
TCRBV4S1A1TA0A5B7 MIR548AD-201ENST00000584780 82 ntBASIC-0.55□□□□□ -2.5
TCRBV4S1A1TA0A5B7 MIR4639-201ENST00000584938 69 ntBASIC-0.55□□□□□ -2.5
TCRBV4S1A1TA0A5B7 AC060780.3-201ENST00000589464 80 ntBASIC-0.55□□□□□ -2.5
TCRBV4S1A1TA0A5B7 MIR3666-201ENST00000607845 111 ntBASIC-0.55□□□□□ -2.5
TCRBV4S1A1TA0A5B7 RNU6-961P-201ENST00000363893 105 ntBASIC-0.56□□□□□ -2.5
TCRBV4S1A1TA0A5B7 RNU6-1323P-201ENST00000384025 107 ntBASIC-0.56□□□□□ -2.5
TCRBV4S1A1TA0A5B7 RNU6-601P-201ENST00000384540 107 ntBASIC-0.56□□□□□ -2.5
TCRBV4S1A1TA0A5B7 MIR215-201ENST00000384858 110 ntBASIC-0.56□□□□□ -2.5
TCRBV4S1A1TA0A5B7 RNU6ATAC25P-201ENST00000408798 117 ntBASIC-0.56□□□□□ -2.5
TCRBV4S1A1TA0A5B7 SNORD93-201ENST00000408813 74 ntBASIC-0.56□□□□□ -2.5
TCRBV4S1A1TA0A5B7 SNORD12B-201ENST00000410433 91 ntBASIC-0.56□□□□□ -2.5
TCRBV4S1A1TA0A5B7 USP9YP30-201ENST00000430729 455 ntBASIC-0.56□□□□□ -2.5
TCRBV4S1A1TA0A5B7 RNU7-73P-201ENST00000458743 63 ntBASIC-0.56□□□□□ -2.5
TCRBV4S1A1TA0A5B7 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC-0.56□□□□□ -2.5
TCRBV4S1A1TA0A5B7 AC105029.1-201ENST00000520250 669 ntBASIC-0.56□□□□□ -2.5
TCRBV4S1A1TA0A5B7 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC-0.56□□□□□ -2.5
TCRBV4S1A1TA0A5B7 AC068137.3-201ENST00000639191 341 ntBASIC-0.56□□□□□ -2.5
TCRBV4S1A1TA0A5B7 Y_RNA.13-201ENST00000362403 112 ntBASIC-0.57□□□□□ -2.5
TCRBV4S1A1TA0A5B7 SNORD14C-201ENST00000365382 88 ntBASIC-0.57□□□□□ -2.5
TCRBV4S1A1TA0A5B7 SNORD116-11-201ENST00000383882 92 ntBASIC-0.57□□□□□ -2.5
TCRBV4S1A1TA0A5B7 SNORD12C-201ENST00000386307 89 ntBASIC-0.57□□□□□ -2.5
TCRBV4S1A1TA0A5B7 RNA5SP118-201ENST00000410385 109 ntBASIC-0.57□□□□□ -2.5
TCRBV4S1A1TA0A5B7 RNU6-1199P-201ENST00000411249 104 ntBASIC-0.57□□□□□ -2.5
TCRBV4S1A1TA0A5B7 FCF1P9-201ENST00000412546 282 ntBASIC-0.57□□□□□ -2.5
TCRBV4S1A1TA0A5B7 MTND3P21-201ENST00000433774 331 ntBASIC-0.57□□□□□ -2.5
TCRBV4S1A1TA0A5B7 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC-0.57□□□□□ -2.5
TCRBV4S1A1TA0A5B7 SNORD126-201ENST00000459475 77 ntBASIC-0.57□□□□□ -2.5
TCRBV4S1A1TA0A5B7 RNU6-958P-201ENST00000516995 106 ntBASIC-0.57□□□□□ -2.5
TCRBV4S1A1TA0A5B7 RNU2-60P-201ENST00000517290 128 ntBASIC-0.57□□□□□ -2.5
TCRBV4S1A1TA0A5B7 AC006600.1-201ENST00000572529 153 ntBASIC-0.57□□□□□ -2.5
TCRBV4S1A1TA0A5B7 AC027449.1-201ENST00000608890 407 ntBASIC-0.57□□□□□ -2.5
TCRBV4S1A1TA0A5B7 AC006157.1-201ENST00000611750 366 ntBASIC-0.57□□□□□ -2.5
TCRBV4S1A1TA0A5B7 AL442067.1-201ENST00000613261 223 ntBASIC-0.57□□□□□ -2.5
TCRBV4S1A1TA0A5B7 AC244669.1-204ENST00000621564 178 ntBASIC-0.57□□□□□ -2.5
Retrieved 100 of 98,524 protein–RNA pairs in 109 ms