Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 RNY1P16-201ENST00000363063 111 ntBASIC-1.03□□□□□ -2.57
TCRBV3S1A0A5B6 Y_RNA.159-201ENST00000363674 87 ntBASIC-1.03□□□□□ -2.57
TCRBV3S1A0A5B6 RNU6-926P-201ENST00000384075 107 ntBASIC-1.03□□□□□ -2.57
TCRBV3S1A0A5B6 RNU6-601P-201ENST00000384540 107 ntBASIC-1.03□□□□□ -2.57
TCRBV3S1A0A5B6 RNU6-297P-201ENST00000384636 107 ntBASIC-1.03□□□□□ -2.57
TCRBV3S1A0A5B6 RNU6-437P-201ENST00000459408 95 ntBASIC-1.03□□□□□ -2.57
TCRBV3S1A0A5B6 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC-1.03□□□□□ -2.57
TCRBV3S1A0A5B6 AP001282.2-201ENST00000616149 309 ntBASIC-1.03□□□□□ -2.57
TCRBV3S1A0A5B6 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC-1.04□□□□□ -2.58
TCRBV3S1A0A5B6 SNORD115-34-201ENST00000362441 82 ntBASIC-1.04□□□□□ -2.58
TCRBV3S1A0A5B6 SNORD115-12-201ENST00000362583 82 ntBASIC-1.04□□□□□ -2.58
TCRBV3S1A0A5B6 SNORD115-29-201ENST00000362834 82 ntBASIC-1.04□□□□□ -2.58
TCRBV3S1A0A5B6 SNORD115-9-201ENST00000362912 82 ntBASIC-1.04□□□□□ -2.58
TCRBV3S1A0A5B6 SNORD115-21-201ENST00000362963 81 ntBASIC-1.04□□□□□ -2.58
TCRBV3S1A0A5B6 SNORD115-14-201ENST00000363090 81 ntBASIC-1.04□□□□□ -2.58
TCRBV3S1A0A5B6 Y_RNA.106-201ENST00000363189 100 ntBASIC-1.04□□□□□ -2.58
TCRBV3S1A0A5B6 SNORD115-13-201ENST00000363358 82 ntBASIC-1.04□□□□□ -2.58
TCRBV3S1A0A5B6 SNORD115-41-201ENST00000363608 82 ntBASIC-1.04□□□□□ -2.58
TCRBV3S1A0A5B6 SNORD115-11-201ENST00000363616 82 ntBASIC-1.04□□□□□ -2.58
TCRBV3S1A0A5B6 SNORD115-5-201ENST00000363633 82 ntBASIC-1.04□□□□□ -2.58
TCRBV3S1A0A5B6 RNU6-1209P-201ENST00000363655 107 ntBASIC-1.04□□□□□ -2.58
TCRBV3S1A0A5B6 SNORD115-39-201ENST00000363694 82 ntBASIC-1.04□□□□□ -2.58
TCRBV3S1A0A5B6 SNORD115-4-201ENST00000363810 82 ntBASIC-1.04□□□□□ -2.58
TCRBV3S1A0A5B6 SNORD115-16-201ENST00000363887 82 ntBASIC-1.04□□□□□ -2.58
TCRBV3S1A0A5B6 SNORD115-6-201ENST00000363942 82 ntBASIC-1.04□□□□□ -2.58
TCRBV3S1A0A5B6 Y_RNA.203-201ENST00000364106 102 ntBASIC-1.04□□□□□ -2.58
TCRBV3S1A0A5B6 SNORD115-42-201ENST00000364273 82 ntBASIC-1.04□□□□□ -2.58
TCRBV3S1A0A5B6 SNORD115-15-201ENST00000364809 81 ntBASIC-1.04□□□□□ -2.58
TCRBV3S1A0A5B6 SNORD115-1-201ENST00000364961 82 ntBASIC-1.04□□□□□ -2.58
TCRBV3S1A0A5B6 SNORD115-26-201ENST00000365067 82 ntBASIC-1.04□□□□□ -2.58
TCRBV3S1A0A5B6 SNORD115-10-201ENST00000365073 81 ntBASIC-1.04□□□□□ -2.58
TCRBV3S1A0A5B6 SNORD115-43-201ENST00000365503 82 ntBASIC-1.04□□□□□ -2.58
TCRBV3S1A0A5B6 SNORD115-36-201ENST00000365629 82 ntBASIC-1.04□□□□□ -2.58
TCRBV3S1A0A5B6 Y_RNA.547-201ENST00000384654 119 ntBASIC-1.04□□□□□ -2.58
TCRBV3S1A0A5B6 RNU2-61P-201ENST00000411069 191 ntBASIC-1.04□□□□□ -2.58
TCRBV3S1A0A5B6 BX276092.1-201ENST00000427368 251 ntBASIC-1.04□□□□□ -2.58
TCRBV3S1A0A5B6 PCMTD1P1-201ENST00000455560 355 ntBASIC-1.04□□□□□ -2.58
TCRBV3S1A0A5B6 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC-1.04□□□□□ -2.58
TCRBV3S1A0A5B6 RNU6-758P-201ENST00000516292 89 ntBASIC-1.04□□□□□ -2.58
TCRBV3S1A0A5B6 AP003072.1-201ENST00000531740 145 ntBASIC-1.04□□□□□ -2.58
TCRBV3S1A0A5B6 SNORD115-40-201ENST00000606510 82 ntBASIC-1.04□□□□□ -2.58
TCRBV3S1A0A5B6 AL391834.2-201ENST00000609982 546 ntBASIC-1.04□□□□□ -2.58
TCRBV3S1A0A5B6 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC-1.04□□□□□ -2.58
TCRBV3S1A0A5B6 AC073869.9-201ENST00000641610 120 ntBASIC-1.04□□□□□ -2.58
TCRBV3S1A0A5B6 Y_RNA.450-201ENST00000384198 113 ntBASIC-1.05□□□□□ -2.58
TCRBV3S1A0A5B6 MIR516B1-201ENST00000385211 90 ntBASIC-1.05□□□□□ -2.58
TCRBV3S1A0A5B6 SNORA40.3-201ENST00000390964 122 ntBASIC-1.05□□□□□ -2.58
TCRBV3S1A0A5B6 AL031003.1-201ENST00000404229 172 ntBASIC-1.05□□□□□ -2.58
TCRBV3S1A0A5B6 RNU6-1190P-201ENST00000410811 104 ntBASIC-1.05□□□□□ -2.58
TCRBV3S1A0A5B6 MTCO2P8-201ENST00000412213 658 ntBASIC-1.05□□□□□ -2.58
TCRBV3S1A0A5B6 AL033528.1-201ENST00000453780 140 ntBASIC-1.05□□□□□ -2.58
TCRBV3S1A0A5B6 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC-1.05□□□□□ -2.58
TCRBV3S1A0A5B6 SNORA25.13-201ENST00000516395 103 ntBASIC-1.05□□□□□ -2.58
TCRBV3S1A0A5B6 SNORA63.5-201ENST00000363548 123 ntBASIC-1.06□□□□□ -2.58
TCRBV3S1A0A5B6 Y_RNA.241-201ENST00000364470 117 ntBASIC-1.06□□□□□ -2.58
TCRBV3S1A0A5B6 RNU6-38P-201ENST00000384085 107 ntBASIC-1.06□□□□□ -2.58
TCRBV3S1A0A5B6 RNU7-63P-201ENST00000459054 62 ntBASIC-1.06□□□□□ -2.58
TCRBV3S1A0A5B6 snoU109.3-201ENST00000459477 145 ntBASIC-1.06□□□□□ -2.58
TCRBV3S1A0A5B6 Y_RNA.692-201ENST00000516627 105 ntBASIC-1.06□□□□□ -2.58
TCRBV3S1A0A5B6 SNORA18.6-201ENST00000516792 115 ntBASIC-1.06□□□□□ -2.58
TCRBV3S1A0A5B6 MIR4636-201ENST00000582271 80 ntBASIC-1.06□□□□□ -2.58
TCRBV3S1A0A5B6 AP000942.4-201ENST00000604811 241 ntBASIC-1.06□□□□□ -2.58
TCRBV3S1A0A5B6 RNA5SP368-201ENST00000364298 116 ntBASIC-1.07□□□□□ -2.58
TCRBV3S1A0A5B6 SNORD110-201ENST00000408189 75 ntBASIC-1.07□□□□□ -2.58
TCRBV3S1A0A5B6 MIR548L-201ENST00000408303 86 ntBASIC-1.07□□□□□ -2.58
TCRBV3S1A0A5B6 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC-1.07□□□□□ -2.58
TCRBV3S1A0A5B6 CHEK2P4-201ENST00000450340 246 ntBASIC-1.07□□□□□ -2.58
TCRBV3S1A0A5B6 MTND1P11-201ENST00000456661 876 ntBASIC-1.07□□□□□ -2.58
TCRBV3S1A0A5B6 SNORA40.9-201ENST00000515895 93 ntBASIC-1.07□□□□□ -2.58
TCRBV3S1A0A5B6 RNU7-25P-201ENST00000516544 62 ntBASIC-1.07□□□□□ -2.58
TCRBV3S1A0A5B6 RNU7-161P-201ENST00000517289 62 ntBASIC-1.07□□□□□ -2.58
TCRBV3S1A0A5B6 AP001328.1-201ENST00000528550 176 ntBASIC-1.07□□□□□ -2.58
TCRBV3S1A0A5B6 AC108676.2-201ENST00000605225 163 ntBASIC-1.07□□□□□ -2.58
TCRBV3S1A0A5B6 MIR6779-201ENST00000617283 64 ntBASIC-1.07□□□□□ -2.58
TCRBV3S1A0A5B6 AL354950.2-201ENST00000617939 290 ntBASIC-1.07□□□□□ -2.58
TCRBV3S1A0A5B6 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC-1.07□□□□□ -2.58
TCRBV3S1A0A5B6 RNU6-490P-201ENST00000362985 107 ntBASIC-1.08□□□□□ -2.58
TCRBV3S1A0A5B6 RNU6-47P-201ENST00000383866 107 ntBASIC-1.08□□□□□ -2.58
TCRBV3S1A0A5B6 RNU6-1323P-201ENST00000384025 107 ntBASIC-1.08□□□□□ -2.58
TCRBV3S1A0A5B6 RNU6-1310P-201ENST00000384153 107 ntBASIC-1.08□□□□□ -2.58
TCRBV3S1A0A5B6 SNORA72.6-201ENST00000384520 129 ntBASIC-1.08□□□□□ -2.58
TCRBV3S1A0A5B6 SNORD41.1-201ENST00000391000 69 ntBASIC-1.08□□□□□ -2.58
TCRBV3S1A0A5B6 RNU6-192P-201ENST00000391253 100 ntBASIC-1.08□□□□□ -2.58
TCRBV3S1A0A5B6 RPL30P15-201ENST00000457129 321 ntBASIC-1.08□□□□□ -2.58
TCRBV3S1A0A5B6 Y_RNA.654-201ENST00000497848 106 ntBASIC-1.08□□□□□ -2.58
TCRBV3S1A0A5B6 AC011352.1-201ENST00000512300 793 ntBASIC-1.08□□□□□ -2.58
TCRBV3S1A0A5B6 MTND2P31-201ENST00000512602 616 ntBASIC-1.08□□□□□ -2.58
TCRBV3S1A0A5B6 RNU6-966P-201ENST00000516479 104 ntBASIC-1.08□□□□□ -2.58
TCRBV3S1A0A5B6 AP003168.1-201ENST00000530091 307 ntBASIC-1.08□□□□□ -2.58
TCRBV3S1A0A5B6 AC055872.1-201ENST00000570978 278 ntBASIC-1.08□□□□□ -2.58
TCRBV3S1A0A5B6 JPX_2.1-201ENST00000614161 69 ntBASIC-1.08□□□□□ -2.58
TCRBV3S1A0A5B6 AL662814.1-201ENST00000617364 121 ntBASIC-1.08□□□□□ -2.58
TCRBV3S1A0A5B6 RNU6-595P-201ENST00000363944 107 ntBASIC-1.09□□□□□ -2.58
TCRBV3S1A0A5B6 Y_RNA.533-201ENST00000384596 114 ntBASIC-1.09□□□□□ -2.58
TCRBV3S1A0A5B6 RNU6-95P-201ENST00000384697 107 ntBASIC-1.09□□□□□ -2.58
TCRBV3S1A0A5B6 RNU6-1158P-201ENST00000391167 107 ntBASIC-1.09□□□□□ -2.58
TCRBV3S1A0A5B6 RNU6-248P-201ENST00000410720 107 ntBASIC-1.09□□□□□ -2.58
TCRBV3S1A0A5B6 Z95118.1-201ENST00000421372 247 ntBASIC-1.09□□□□□ -2.58
TCRBV3S1A0A5B6 USMG5P1-201ENST00000425964 177 ntBASIC-1.09□□□□□ -2.58
TCRBV3S1A0A5B6 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC-1.09□□□□□ -2.58
Retrieved 100 of 98,524 protein–RNA pairs in 116.7 ms