Protein–RNA interactions for Protein: A0A0J9YWV2

TRBV4-1, T-cell receptor beta variable 4-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV4-1A0A0J9YWV2 MIR4724-201ENST00000579485 89 ntBASIC1.14□□□□□ -2.23
TRBV4-1A0A0J9YWV2 MIR4282-201ENST00000583613 67 ntBASIC1.14□□□□□ -2.23
TRBV4-1A0A0J9YWV2 Y_RNA.293-201ENST00000364908 93 ntBASIC1.13□□□□□ -2.23
TRBV4-1A0A0J9YWV2 RNU6-442P-201ENST00000383968 104 ntBASIC1.13□□□□□ -2.23
TRBV4-1A0A0J9YWV2 MIR516B2-201ENST00000385190 85 ntBASIC1.13□□□□□ -2.23
TRBV4-1A0A0J9YWV2 SNORD72-201ENST00000390994 80 ntBASIC1.13□□□□□ -2.23
TRBV4-1A0A0J9YWV2 SNORA40.6-201ENST00000391153 128 ntBASIC1.13□□□□□ -2.23
TRBV4-1A0A0J9YWV2 RNU6-1054P-201ENST00000411293 104 ntBASIC1.13□□□□□ -2.23
TRBV4-1A0A0J9YWV2 RNU6-1007P-201ENST00000516586 107 ntBASIC1.13□□□□□ -2.23
TRBV4-1A0A0J9YWV2 MIR3660-201ENST00000584845 100 ntBASIC1.13□□□□□ -2.23
TRBV4-1A0A0J9YWV2 MIR8065-201ENST00000620577 100 ntBASIC1.13□□□□□ -2.23
TRBV4-1A0A0J9YWV2 MIR367-201ENST00000362299 68 ntBASIC1.12□□□□□ -2.23
TRBV4-1A0A0J9YWV2 Y_RNA.242-201ENST00000364473 110 ntBASIC1.12□□□□□ -2.23
TRBV4-1A0A0J9YWV2 Y_RNA.352-201ENST00000365439 102 ntBASIC1.12□□□□□ -2.23
TRBV4-1A0A0J9YWV2 Y_RNA.556-201ENST00000384677 113 ntBASIC1.12□□□□□ -2.23
TRBV4-1A0A0J9YWV2 MIR15B-201ENST00000385045 98 ntBASIC1.12□□□□□ -2.23
TRBV4-1A0A0J9YWV2 RNU6-651P-201ENST00000411040 105 ntBASIC1.12□□□□□ -2.23
TRBV4-1A0A0J9YWV2 AC245047.8-201ENST00000456455 284 ntBASIC1.12□□□□□ -2.23
TRBV4-1A0A0J9YWV2 SNORD127-201ENST00000458892 86 ntBASIC1.12□□□□□ -2.23
TRBV4-1A0A0J9YWV2 RNU6-830P-201ENST00000516353 107 ntBASIC1.12□□□□□ -2.23
TRBV4-1A0A0J9YWV2 RNU1-92P-201ENST00000517017 135 ntBASIC1.12□□□□□ -2.23
TRBV4-1A0A0J9YWV2 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC1.12□□□□□ -2.23
TRBV4-1A0A0J9YWV2 AC012433.1-201ENST00000588916 398 ntBASIC1.12□□□□□ -2.23
TRBV4-1A0A0J9YWV2 AC006441.5-201ENST00000612680 209 ntBASIC1.12□□□□□ -2.23
TRBV4-1A0A0J9YWV2 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.12□□□□□ -2.23
TRBV4-1A0A0J9YWV2 Y_RNA.802-201ENST00000614892 130 ntBASIC1.12□□□□□ -2.23
TRBV4-1A0A0J9YWV2 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.12□□□□□ -2.23
TRBV4-1A0A0J9YWV2 Y_RNA.14-201ENST00000362415 103 ntBASIC1.11□□□□□ -2.23
TRBV4-1A0A0J9YWV2 RNU6-268P-201ENST00000364174 107 ntBASIC1.11□□□□□ -2.23
TRBV4-1A0A0J9YWV2 Y_RNA.562-201ENST00000384695 113 ntBASIC1.11□□□□□ -2.23
TRBV4-1A0A0J9YWV2 snoU13.26-201ENST00000459452 105 ntBASIC1.11□□□□□ -2.23
TRBV4-1A0A0J9YWV2 Y_RNA.668-201ENST00000516233 93 ntBASIC1.11□□□□□ -2.23
TRBV4-1A0A0J9YWV2 SNORA74.3-201ENST00000517108 154 ntBASIC1.11□□□□□ -2.23
TRBV4-1A0A0J9YWV2 AC100767.1-201ENST00000528178 123 ntBASIC1.11□□□□□ -2.23
TRBV4-1A0A0J9YWV2 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.11□□□□□ -2.23
TRBV4-1A0A0J9YWV2 MIR3945-201ENST00000581853 98 ntBASIC1.11□□□□□ -2.23
TRBV4-1A0A0J9YWV2 uc_338.4-201ENST00000616635 176 ntBASIC1.11□□□□□ -2.23
TRBV4-1A0A0J9YWV2 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.11□□□□□ -2.23
TRBV4-1A0A0J9YWV2 Y_RNA.122-201ENST00000363331 96 ntBASIC1.1□□□□□ -2.23
TRBV4-1A0A0J9YWV2 RNU4-10P-201ENST00000364383 140 ntBASIC1.1□□□□□ -2.23
TRBV4-1A0A0J9YWV2 Y_RNA.288-201ENST00000364854 92 ntBASIC1.1□□□□□ -2.23
TRBV4-1A0A0J9YWV2 RNU6-1138P-201ENST00000365359 106 ntBASIC1.1□□□□□ -2.23
TRBV4-1A0A0J9YWV2 SNORD38C-201ENST00000384381 69 ntBASIC1.1□□□□□ -2.23
TRBV4-1A0A0J9YWV2 RNU6-939P-201ENST00000384634 107 ntBASIC1.1□□□□□ -2.23
TRBV4-1A0A0J9YWV2 MIR626-201ENST00000385032 94 ntBASIC1.1□□□□□ -2.23
TRBV4-1A0A0J9YWV2 RNU2-38P-201ENST00000410856 79 ntBASIC1.1□□□□□ -2.23
TRBV4-1A0A0J9YWV2 MTND3P2-201ENST00000438452 342 ntBASIC1.1□□□□□ -2.23
TRBV4-1A0A0J9YWV2 AL118496.2-201ENST00000448300 230 ntBASIC1.1□□□□□ -2.23
TRBV4-1A0A0J9YWV2 AC023449.1-201ENST00000454464 154 ntBASIC1.1□□□□□ -2.23
TRBV4-1A0A0J9YWV2 RN7SKP179-201ENST00000516126 217 ntBASIC1.1□□□□□ -2.23
TRBV4-1A0A0J9YWV2 SNORD111.1-201ENST00000516421 86 ntBASIC1.1□□□□□ -2.23
TRBV4-1A0A0J9YWV2 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.1□□□□□ -2.23
TRBV4-1A0A0J9YWV2 AL096861.1-201ENST00000610899 123 ntBASIC1.1□□□□□ -2.23
TRBV4-1A0A0J9YWV2 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.1□□□□□ -2.23
TRBV4-1A0A0J9YWV2 RNA5SP327-201ENST00000362494 101 ntBASIC1.09□□□□□ -2.23
TRBV4-1A0A0J9YWV2 RNU1-17P-201ENST00000363022 152 ntBASIC1.09□□□□□ -2.23
TRBV4-1A0A0J9YWV2 SNORA8.3-201ENST00000384679 139 ntBASIC1.09□□□□□ -2.23
TRBV4-1A0A0J9YWV2 MIR1302-3-201ENST00000408128 138 ntBASIC1.09□□□□□ -2.23
TRBV4-1A0A0J9YWV2 Y_RNA.590-201ENST00000410140 107 ntBASIC1.09□□□□□ -2.23
TRBV4-1A0A0J9YWV2 AC245047.7-201ENST00000440265 293 ntBASIC1.09□□□□□ -2.23
TRBV4-1A0A0J9YWV2 snoU13.25-201ENST00000458945 104 ntBASIC1.09□□□□□ -2.23
TRBV4-1A0A0J9YWV2 SNORD123-201ENST00000459473 70 ntBASIC1.09□□□□□ -2.23
TRBV4-1A0A0J9YWV2 SNORD77.4-201ENST00000516158 81 ntBASIC1.09□□□□□ -2.23
TRBV4-1A0A0J9YWV2 RNU7-149P-201ENST00000516739 59 ntBASIC1.09□□□□□ -2.23
TRBV4-1A0A0J9YWV2 RNU6-548P-201ENST00000517083 115 ntBASIC1.09□□□□□ -2.23
TRBV4-1A0A0J9YWV2 MIR4643-201ENST00000577473 78 ntBASIC1.09□□□□□ -2.23
TRBV4-1A0A0J9YWV2 AC006006.1-201ENST00000603082 144 ntBASIC1.09□□□□□ -2.23
TRBV4-1A0A0J9YWV2 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.09□□□□□ -2.24
TRBV4-1A0A0J9YWV2 Y_RNA.304-201ENST00000365011 112 ntBASIC1.08□□□□□ -2.24
TRBV4-1A0A0J9YWV2 MIR802-201ENST00000390235 94 ntBASIC1.08□□□□□ -2.24
TRBV4-1A0A0J9YWV2 MIR1285-1-201ENST00000408593 84 ntBASIC1.08□□□□□ -2.24
TRBV4-1A0A0J9YWV2 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.08□□□□□ -2.24
TRBV4-1A0A0J9YWV2 RPL39P39-201ENST00000455840 151 ntBASIC1.08□□□□□ -2.24
TRBV4-1A0A0J9YWV2 AC048334.1-201ENST00000477975 159 ntBASIC1.08□□□□□ -2.24
TRBV4-1A0A0J9YWV2 SNORA31.2-201ENST00000516019 134 ntBASIC1.08□□□□□ -2.24
TRBV4-1A0A0J9YWV2 RNU7-43P-201ENST00000516554 64 ntBASIC1.08□□□□□ -2.24
TRBV4-1A0A0J9YWV2 MIR4421-201ENST00000578133 69 ntBASIC1.08□□□□□ -2.24
TRBV4-1A0A0J9YWV2 MIR3192-201ENST00000584920 77 ntBASIC1.08□□□□□ -2.24
TRBV4-1A0A0J9YWV2 AL049861.1-201ENST00000603130 150 ntBASIC1.08□□□□□ -2.24
TRBV4-1A0A0J9YWV2 Y_RNA.24-201ENST00000362508 103 ntBASIC1.07□□□□□ -2.24
TRBV4-1A0A0J9YWV2 Y_RNA.229-201ENST00000364347 113 ntBASIC1.07□□□□□ -2.24
TRBV4-1A0A0J9YWV2 Y_RNA.572-201ENST00000384757 98 ntBASIC1.07□□□□□ -2.24
TRBV4-1A0A0J9YWV2 SNORA17.3-201ENST00000391159 129 ntBASIC1.07□□□□□ -2.24
TRBV4-1A0A0J9YWV2 MIR548H3-201ENST00000408771 118 ntBASIC1.07□□□□□ -2.24
TRBV4-1A0A0J9YWV2 AL591704.2-201ENST00000421658 181 ntBASIC1.07□□□□□ -2.24
TRBV4-1A0A0J9YWV2 RNU6-1132P-201ENST00000459214 107 ntBASIC1.07□□□□□ -2.24
TRBV4-1A0A0J9YWV2 RN7SKP164-201ENST00000516138 266 ntBASIC1.07□□□□□ -2.24
TRBV4-1A0A0J9YWV2 RNU6-947P-201ENST00000516264 106 ntBASIC1.07□□□□□ -2.24
TRBV4-1A0A0J9YWV2 SNORA18.7-201ENST00000516910 131 ntBASIC1.07□□□□□ -2.24
TRBV4-1A0A0J9YWV2 MIR4764-201ENST00000580680 88 ntBASIC1.07□□□□□ -2.24
TRBV4-1A0A0J9YWV2 AC011921.3-201ENST00000605540 361 ntBASIC1.07□□□□□ -2.24
TRBV4-1A0A0J9YWV2 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC1.07□□□□□ -2.24
TRBV4-1A0A0J9YWV2 AL391903.3-201ENST00000612158 163 ntBASIC1.07□□□□□ -2.24
TRBV4-1A0A0J9YWV2 Pinc.1-201ENST00000616452 154 ntBASIC1.07□□□□□ -2.24
TRBV4-1A0A0J9YWV2 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC1.07□□□□□ -2.24
TRBV4-1A0A0J9YWV2 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.06□□□□□ -2.24
TRBV4-1A0A0J9YWV2 Y_RNA.277-201ENST00000364754 102 ntBASIC1.06□□□□□ -2.24
TRBV4-1A0A0J9YWV2 SNORA25.8-201ENST00000364831 128 ntBASIC1.06□□□□□ -2.24
TRBV4-1A0A0J9YWV2 Y_RNA.416-201ENST00000384014 113 ntBASIC1.06□□□□□ -2.24
TRBV4-1A0A0J9YWV2 SNORD58.1-201ENST00000391313 66 ntBASIC1.06□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 171 ms