Protein–RNA interactions for Protein: A0A0B4J248

TRAV1-1, T-cell receptor alpha variable 1-1 (Fragment), humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-1A0A0B4J248 Y_RNA.471-201ENST00000384312 102 ntBASIC-0.38□□□□□ -2.47
TRAV1-1A0A0B4J248 Y_RNA.494-201ENST00000384432 111 ntBASIC-0.38□□□□□ -2.47
TRAV1-1A0A0B4J248 Y_RNA.552-201ENST00000384665 112 ntBASIC-0.38□□□□□ -2.47
TRAV1-1A0A0B4J248 MIR588-201ENST00000384900 83 ntBASIC-0.38□□□□□ -2.47
TRAV1-1A0A0B4J248 MCFD2P1-201ENST00000417812 300 ntBASIC-0.38□□□□□ -2.47
TRAV1-1A0A0B4J248 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC-0.38□□□□□ -2.47
TRAV1-1A0A0B4J248 snoU13.2-201ENST00000459201 104 ntBASIC-0.38□□□□□ -2.47
TRAV1-1A0A0B4J248 AC008507.4-201ENST00000585464 127 ntBASIC-0.38□□□□□ -2.47
TRAV1-1A0A0B4J248 AC060780.3-201ENST00000589464 80 ntBASIC-0.38□□□□□ -2.47
TRAV1-1A0A0B4J248 AL391262.2-201ENST00000622466 494 ntBASIC-0.38□□□□□ -2.47
TRAV1-1A0A0B4J248 Z97988.1-201ENST00000637697 135 ntBASIC-0.38□□□□□ -2.47
TRAV1-1A0A0B4J248 Y_RNA.48-201ENST00000362710 103 ntBASIC-0.39□□□□□ -2.47
TRAV1-1A0A0B4J248 RNU4-73P-201ENST00000363164 141 ntBASIC-0.39□□□□□ -2.47
TRAV1-1A0A0B4J248 SNORA18.1-201ENST00000363418 128 ntBASIC-0.39□□□□□ -2.47
TRAV1-1A0A0B4J248 RNU6-740P-201ENST00000364734 105 ntBASIC-0.39□□□□□ -2.47
TRAV1-1A0A0B4J248 Y_RNA.294-201ENST00000364916 102 ntBASIC-0.39□□□□□ -2.47
TRAV1-1A0A0B4J248 RNU6-601P-201ENST00000384540 107 ntBASIC-0.39□□□□□ -2.47
TRAV1-1A0A0B4J248 SNORD38B-201ENST00000384690 67 ntBASIC-0.39□□□□□ -2.47
TRAV1-1A0A0B4J248 MIR501-201ENST00000390204 84 ntBASIC-0.39□□□□□ -2.47
TRAV1-1A0A0B4J248 RNU6-192P-201ENST00000391253 100 ntBASIC-0.39□□□□□ -2.47
TRAV1-1A0A0B4J248 RNU6-1199P-201ENST00000411249 104 ntBASIC-0.39□□□□□ -2.47
TRAV1-1A0A0B4J248 MTND1P17-201ENST00000448961 204 ntBASIC-0.39□□□□□ -2.47
TRAV1-1A0A0B4J248 CHEK2P4-201ENST00000450340 246 ntBASIC-0.39□□□□□ -2.47
TRAV1-1A0A0B4J248 SNORD5.1-201ENST00000458800 75 ntBASIC-0.39□□□□□ -2.47
TRAV1-1A0A0B4J248 RNU6-469P-201ENST00000516253 101 ntBASIC-0.39□□□□□ -2.47
TRAV1-1A0A0B4J248 RNU6-758P-201ENST00000516292 89 ntBASIC-0.39□□□□□ -2.47
TRAV1-1A0A0B4J248 RNU6-320P-201ENST00000516511 106 ntBASIC-0.39□□□□□ -2.47
TRAV1-1A0A0B4J248 SNORA31.14-201ENST00000516728 116 ntBASIC-0.39□□□□□ -2.47
TRAV1-1A0A0B4J248 RNA5SP47-201ENST00000517230 109 ntBASIC-0.39□□□□□ -2.47
TRAV1-1A0A0B4J248 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC-0.39□□□□□ -2.47
TRAV1-1A0A0B4J248 MIR3152-201ENST00000579801 74 ntBASIC-0.39□□□□□ -2.47
TRAV1-1A0A0B4J248 AC011921.3-201ENST00000605540 361 ntBASIC-0.39□□□□□ -2.47
TRAV1-1A0A0B4J248 AC022306.2-201ENST00000617563 647 ntBASIC-0.39□□□□□ -2.47
TRAV1-1A0A0B4J248 MIR30D-201ENST00000362283 70 ntBASIC-0.4□□□□□ -2.47
TRAV1-1A0A0B4J248 Y_RNA.42-201ENST00000362660 108 ntBASIC-0.4□□□□□ -2.47
TRAV1-1A0A0B4J248 Y_RNA.101-201ENST00000363154 102 ntBASIC-0.4□□□□□ -2.47
TRAV1-1A0A0B4J248 RNU6-1085P-201ENST00000363576 107 ntBASIC-0.4□□□□□ -2.47
TRAV1-1A0A0B4J248 RNU6-1059P-201ENST00000363752 98 ntBASIC-0.4□□□□□ -2.47
TRAV1-1A0A0B4J248 Y_RNA.203-201ENST00000364106 102 ntBASIC-0.4□□□□□ -2.47
TRAV1-1A0A0B4J248 RNA5SP368-201ENST00000364298 116 ntBASIC-0.4□□□□□ -2.47
TRAV1-1A0A0B4J248 MIR604-201ENST00000384880 94 ntBASIC-0.4□□□□□ -2.47
TRAV1-1A0A0B4J248 SNORA75.4-201ENST00000391278 119 ntBASIC-0.4□□□□□ -2.47
TRAV1-1A0A0B4J248 RNU4-30P-201ENST00000410245 143 ntBASIC-0.4□□□□□ -2.47
TRAV1-1A0A0B4J248 SNORD12B-201ENST00000410433 91 ntBASIC-0.4□□□□□ -2.47
TRAV1-1A0A0B4J248 FCF1P9-201ENST00000412546 282 ntBASIC-0.4□□□□□ -2.47
TRAV1-1A0A0B4J248 MTND4LP11-201ENST00000422184 280 ntBASIC-0.4□□□□□ -2.47
TRAV1-1A0A0B4J248 USP9YP30-201ENST00000430729 455 ntBASIC-0.4□□□□□ -2.47
TRAV1-1A0A0B4J248 RNU6-436P-201ENST00000516171 114 ntBASIC-0.4□□□□□ -2.47
TRAV1-1A0A0B4J248 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC-0.4□□□□□ -2.47
TRAV1-1A0A0B4J248 MIR4493-201ENST00000584016 73 ntBASIC-0.4□□□□□ -2.47
TRAV1-1A0A0B4J248 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC-0.4□□□□□ -2.47
TRAV1-1A0A0B4J248 AC093424.1-201ENST00000604999 338 ntBASIC-0.4□□□□□ -2.47
TRAV1-1A0A0B4J248 AC005014.2-201ENST00000607795 599 ntBASIC-0.4□□□□□ -2.47
TRAV1-1A0A0B4J248 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC-0.4□□□□□ -2.47
TRAV1-1A0A0B4J248 AC091304.10-201ENST00000641554 121 ntBASIC-0.4□□□□□ -2.47
TRAV1-1A0A0B4J248 RNU6-1209P-201ENST00000363655 107 ntBASIC-0.41□□□□□ -2.48
TRAV1-1A0A0B4J248 RNU6-961P-201ENST00000363893 105 ntBASIC-0.41□□□□□ -2.48
TRAV1-1A0A0B4J248 SNORA1.1-201ENST00000364671 133 ntBASIC-0.41□□□□□ -2.48
TRAV1-1A0A0B4J248 Y_RNA.414-201ENST00000384011 101 ntBASIC-0.41□□□□□ -2.48
TRAV1-1A0A0B4J248 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC-0.41□□□□□ -2.48
TRAV1-1A0A0B4J248 AC236972.2-201ENST00000434979 310 ntBASIC-0.41□□□□□ -2.48
TRAV1-1A0A0B4J248 POLR2KP2-201ENST00000438155 177 ntBASIC-0.41□□□□□ -2.48
TRAV1-1A0A0B4J248 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC-0.41□□□□□ -2.48
TRAV1-1A0A0B4J248 RNU7-73P-201ENST00000458743 63 ntBASIC-0.41□□□□□ -2.48
TRAV1-1A0A0B4J248 RNU6-408P-201ENST00000515910 100 ntBASIC-0.41□□□□□ -2.48
TRAV1-1A0A0B4J248 Y_RNA.693-201ENST00000516641 110 ntBASIC-0.41□□□□□ -2.48
TRAV1-1A0A0B4J248 RNU6-135P-201ENST00000516769 101 ntBASIC-0.41□□□□□ -2.48
TRAV1-1A0A0B4J248 RNU7-116P-201ENST00000516940 62 ntBASIC-0.41□□□□□ -2.48
TRAV1-1A0A0B4J248 AC121247.2-201ENST00000604776 136 ntBASIC-0.41□□□□□ -2.48
TRAV1-1A0A0B4J248 DISC2.1-201ENST00000612827 205 ntBASIC-0.41□□□□□ -2.48
TRAV1-1A0A0B4J248 AC134878.1-201ENST00000619901 243 ntBASIC-0.41□□□□□ -2.48
TRAV1-1A0A0B4J248 MIR6086-201ENST00000638065 55 ntBASIC-0.41□□□□□ -2.48
TRAV1-1A0A0B4J248 MIR101-1-201ENST00000362265 75 ntBASIC-0.42□□□□□ -2.48
TRAV1-1A0A0B4J248 RNU6-1115P-201ENST00000362490 106 ntBASIC-0.42□□□□□ -2.48
TRAV1-1A0A0B4J248 RNU6-1301P-201ENST00000362724 104 ntBASIC-0.42□□□□□ -2.48
TRAV1-1A0A0B4J248 RNA5SP275-201ENST00000363936 118 ntBASIC-0.42□□□□□ -2.48
TRAV1-1A0A0B4J248 RNU4-75P-201ENST00000364621 146 ntBASIC-0.42□□□□□ -2.48
TRAV1-1A0A0B4J248 Y_RNA.458-201ENST00000384240 102 ntBASIC-0.42□□□□□ -2.48
TRAV1-1A0A0B4J248 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.42□□□□□ -2.48
TRAV1-1A0A0B4J248 MT-TF-201ENST00000387314 71 ntBASIC-0.42□□□□□ -2.48
TRAV1-1A0A0B4J248 RNU6-913P-201ENST00000390913 95 ntBASIC-0.42□□□□□ -2.48
TRAV1-1A0A0B4J248 SNORD72-201ENST00000390994 80 ntBASIC-0.42□□□□□ -2.48
TRAV1-1A0A0B4J248 MTCO3P40-201ENST00000392516 676 ntBASIC-0.42□□□□□ -2.48
TRAV1-1A0A0B4J248 AL603910.2-201ENST00000407268 136 ntBASIC-0.42□□□□□ -2.48
TRAV1-1A0A0B4J248 RNA5SP451-201ENST00000410588 110 ntBASIC-0.42□□□□□ -2.48
TRAV1-1A0A0B4J248 SEPT14P3-201ENST00000439401 183 ntBASIC-0.42□□□□□ -2.48
TRAV1-1A0A0B4J248 AL732372.2-207ENST00000445840 183 ntBASIC-0.42□□□□□ -2.48
TRAV1-1A0A0B4J248 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC-0.42□□□□□ -2.48
TRAV1-1A0A0B4J248 SEPT14P2-201ENST00000453405 183 ntBASIC-0.42□□□□□ -2.48
TRAV1-1A0A0B4J248 RNU7-87P-201ENST00000459343 62 ntBASIC-0.42□□□□□ -2.48
TRAV1-1A0A0B4J248 SEPT14P4-201ENST00000513445 186 ntBASIC-0.42□□□□□ -2.48
TRAV1-1A0A0B4J248 FO082796.1-201ENST00000523795 183 ntBASIC-0.42□□□□□ -2.48
TRAV1-1A0A0B4J248 POLR3GP1-201ENST00000594073 261 ntBASIC-0.42□□□□□ -2.48
TRAV1-1A0A0B4J248 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC-0.42□□□□□ -2.48
TRAV1-1A0A0B4J248 TUG1_4.1-201ENST00000619464 181 ntBASIC-0.42□□□□□ -2.48
TRAV1-1A0A0B4J248 Y_RNA.390-201ENST00000383932 102 ntBASIC-0.43□□□□□ -2.48
TRAV1-1A0A0B4J248 SNORD28-201ENST00000384706 75 ntBASIC-0.43□□□□□ -2.48
TRAV1-1A0A0B4J248 SNORD12C-201ENST00000386307 89 ntBASIC-0.43□□□□□ -2.48
TRAV1-1A0A0B4J248 RNU6-908P-201ENST00000410160 94 ntBASIC-0.43□□□□□ -2.48
TRAV1-1A0A0B4J248 RNA5SP118-201ENST00000410385 109 ntBASIC-0.43□□□□□ -2.48
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms