Protein–RNA interactions for Protein: R4GMX3

COMMD3-BMI1, COMMD3-BMI1 readthrough, humanhuman

Predictions only

Length 469 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-BMI1R4GMX3 AC243829.6-201ENST00000612652 106 ntBASIC0.35□□□□□ -2.35
COMMD3-BMI1R4GMX3 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.34□□□□□ -2.35
COMMD3-BMI1R4GMX3 RNU6-626P-201ENST00000363354 107 ntBASIC0.34□□□□□ -2.36
COMMD3-BMI1R4GMX3 SNORA1.2-201ENST00000365189 134 ntBASIC0.34□□□□□ -2.36
COMMD3-BMI1R4GMX3 RNU6-20P-201ENST00000384106 107 ntBASIC0.34□□□□□ -2.36
COMMD3-BMI1R4GMX3 Y_RNA.537-201ENST00000384626 109 ntBASIC0.34□□□□□ -2.36
COMMD3-BMI1R4GMX3 MIR1302-7-201ENST00000408841 72 ntBASIC0.34□□□□□ -2.36
COMMD3-BMI1R4GMX3 MCFD2P1-201ENST00000417812 300 ntBASIC0.34□□□□□ -2.36
COMMD3-BMI1R4GMX3 AC016907.1-201ENST00000419483 435 ntBASIC0.34□□□□□ -2.36
COMMD3-BMI1R4GMX3 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.34□□□□□ -2.36
COMMD3-BMI1R4GMX3 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC0.34□□□□□ -2.36
COMMD3-BMI1R4GMX3 RNU4-57P-201ENST00000515980 135 ntBASIC0.34□□□□□ -2.36
COMMD3-BMI1R4GMX3 Y_RNA.691-201ENST00000516611 103 ntBASIC0.34□□□□□ -2.36
COMMD3-BMI1R4GMX3 AC055872.1-201ENST00000570978 278 ntBASIC0.34□□□□□ -2.36
COMMD3-BMI1R4GMX3 MIR4300-201ENST00000581016 96 ntBASIC0.34□□□□□ -2.36
COMMD3-BMI1R4GMX3 MIR2681-201ENST00000581814 105 ntBASIC0.34□□□□□ -2.36
COMMD3-BMI1R4GMX3 WT1-AS_8.1-201ENST00000615200 275 ntBASIC0.34□□□□□ -2.36
COMMD3-BMI1R4GMX3 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC0.34□□□□□ -2.36
COMMD3-BMI1R4GMX3 AC090625.1-201ENST00000357130 210 ntBASIC0.33□□□□□ -2.36
COMMD3-BMI1R4GMX3 Y_RNA.146-201ENST00000363549 102 ntBASIC0.33□□□□□ -2.36
COMMD3-BMI1R4GMX3 RNU6-767P-201ENST00000384132 107 ntBASIC0.33□□□□□ -2.36
COMMD3-BMI1R4GMX3 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC0.33□□□□□ -2.36
COMMD3-BMI1R4GMX3 RNU6-177P-201ENST00000411257 104 ntBASIC0.33□□□□□ -2.36
COMMD3-BMI1R4GMX3 SCARNA8-201ENST00000515924 131 ntBASIC0.33□□□□□ -2.36
COMMD3-BMI1R4GMX3 RN7SKP295-201ENST00000517264 153 ntBASIC0.33□□□□□ -2.36
COMMD3-BMI1R4GMX3 AP003357.1-201ENST00000604497 148 ntBASIC0.33□□□□□ -2.36
COMMD3-BMI1R4GMX3 JPX_2.1-201ENST00000614161 69 ntBASIC0.33□□□□□ -2.36
COMMD3-BMI1R4GMX3 AC133104.2-201ENST00000615272 193 ntBASIC0.33□□□□□ -2.36
COMMD3-BMI1R4GMX3 Pinc.1-201ENST00000616452 154 ntBASIC0.33□□□□□ -2.36
COMMD3-BMI1R4GMX3 Y_RNA.203-201ENST00000364106 102 ntBASIC0.32□□□□□ -2.36
COMMD3-BMI1R4GMX3 RNU6-580P-201ENST00000365159 107 ntBASIC0.32□□□□□ -2.36
COMMD3-BMI1R4GMX3 SNORA2B-201ENST00000384583 137 ntBASIC0.32□□□□□ -2.36
COMMD3-BMI1R4GMX3 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC0.32□□□□□ -2.36
COMMD3-BMI1R4GMX3 RNA5SP193-201ENST00000410353 107 ntBASIC0.32□□□□□ -2.36
COMMD3-BMI1R4GMX3 AC099799.1-201ENST00000439809 192 ntBASIC0.32□□□□□ -2.36
COMMD3-BMI1R4GMX3 AC005042.3-201ENST00000453230 174 ntBASIC0.32□□□□□ -2.36
COMMD3-BMI1R4GMX3 MIR1273G-201ENST00000577677 100 ntBASIC0.32□□□□□ -2.36
COMMD3-BMI1R4GMX3 MIR548AR-201ENST00000582191 57 ntBASIC0.32□□□□□ -2.36
COMMD3-BMI1R4GMX3 MIR5188-201ENST00000583467 113 ntBASIC0.32□□□□□ -2.36
COMMD3-BMI1R4GMX3 MIR6779-201ENST00000617283 64 ntBASIC0.32□□□□□ -2.36
COMMD3-BMI1R4GMX3 Y_RNA.27-201ENST00000362540 103 ntBASIC0.31□□□□□ -2.36
COMMD3-BMI1R4GMX3 VTRNA1-3-201ENST00000365645 89 ntBASIC0.31□□□□□ -2.36
COMMD3-BMI1R4GMX3 MIR802-201ENST00000390235 94 ntBASIC0.31□□□□□ -2.36
COMMD3-BMI1R4GMX3 Y_RNA.605-201ENST00000410577 105 ntBASIC0.31□□□□□ -2.36
COMMD3-BMI1R4GMX3 MTCO2P12-201ENST00000427426 682 ntBASIC0.31□□□□□ -2.36
COMMD3-BMI1R4GMX3 RNU6-718P-201ENST00000516166 105 ntBASIC0.31□□□□□ -2.36
COMMD3-BMI1R4GMX3 RNA5SP134-201ENST00000516492 96 ntBASIC0.31□□□□□ -2.36
COMMD3-BMI1R4GMX3 RNU7-30P-201ENST00000516835 62 ntBASIC0.31□□□□□ -2.36
COMMD3-BMI1R4GMX3 MIR4659A-201ENST00000580269 81 ntBASIC0.31□□□□□ -2.36
COMMD3-BMI1R4GMX3 AC098679.4-201ENST00000624241 654 ntBASIC0.31□□□□□ -2.36
COMMD3-BMI1R4GMX3 Y_RNA.172-201ENST00000363765 102 ntBASIC0.3□□□□□ -2.36
COMMD3-BMI1R4GMX3 Y_RNA.205-201ENST00000364128 113 ntBASIC0.3□□□□□ -2.36
COMMD3-BMI1R4GMX3 Y_RNA.341-201ENST00000365341 102 ntBASIC0.3□□□□□ -2.36
COMMD3-BMI1R4GMX3 RNU6-926P-201ENST00000384075 107 ntBASIC0.3□□□□□ -2.36
COMMD3-BMI1R4GMX3 Y_RNA.462-201ENST00000384268 102 ntBASIC0.3□□□□□ -2.36
COMMD3-BMI1R4GMX3 MIR628-201ENST00000385229 95 ntBASIC0.3□□□□□ -2.36
COMMD3-BMI1R4GMX3 MIR140-201ENST00000385282 100 ntBASIC0.3□□□□□ -2.36
COMMD3-BMI1R4GMX3 MIR548F1-201ENST00000408667 84 ntBASIC0.3□□□□□ -2.36
COMMD3-BMI1R4GMX3 RNU6-855P-201ENST00000410395 104 ntBASIC0.3□□□□□ -2.36
COMMD3-BMI1R4GMX3 FGF7P6-202ENST00000451282 293 ntBASIC0.3□□□□□ -2.36
COMMD3-BMI1R4GMX3 POLR3GP1-201ENST00000594073 261 ntBASIC0.3□□□□□ -2.36
COMMD3-BMI1R4GMX3 U2.1-201ENST00000618978 145 ntBASIC0.3□□□□□ -2.36
COMMD3-BMI1R4GMX3 RNU6-845P-201ENST00000362578 103 ntBASIC0.29□□□□□ -2.36
COMMD3-BMI1R4GMX3 RNU6-1188P-201ENST00000363795 107 ntBASIC0.29□□□□□ -2.36
COMMD3-BMI1R4GMX3 Y_RNA.310-201ENST00000365063 113 ntBASIC0.29□□□□□ -2.36
COMMD3-BMI1R4GMX3 Y_RNA.318-201ENST00000365131 97 ntBASIC0.29□□□□□ -2.36
COMMD3-BMI1R4GMX3 SNORA51.10-201ENST00000384418 136 ntBASIC0.29□□□□□ -2.36
COMMD3-BMI1R4GMX3 MIR573-201ENST00000384964 99 ntBASIC0.29□□□□□ -2.36
COMMD3-BMI1R4GMX3 U8.17-201ENST00000391292 132 ntBASIC0.29□□□□□ -2.36
COMMD3-BMI1R4GMX3 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC0.29□□□□□ -2.36
COMMD3-BMI1R4GMX3 SNRPGP14-201ENST00000435400 219 ntBASIC0.29□□□□□ -2.36
COMMD3-BMI1R4GMX3 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC0.29□□□□□ -2.36
COMMD3-BMI1R4GMX3 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC0.29□□□□□ -2.36
COMMD3-BMI1R4GMX3 RNU6-470P-201ENST00000515954 104 ntBASIC0.29□□□□□ -2.36
COMMD3-BMI1R4GMX3 AP000753.3-201ENST00000604083 169 ntBASIC0.29□□□□□ -2.36
COMMD3-BMI1R4GMX3 AC010205.1-201ENST00000616668 449 ntBASIC0.29□□□□□ -2.36
COMMD3-BMI1R4GMX3 AC015726.2-201ENST00000620112 122 ntBASIC0.29□□□□□ -2.36
COMMD3-BMI1R4GMX3 TPTEP1-208ENST00000636884 213 ntBASIC0.29□□□□□ -2.36
COMMD3-BMI1R4GMX3 MIR924-201ENST00000638017 53 ntBASIC0.29□□□□□ -2.36
COMMD3-BMI1R4GMX3 AC073869.6-201ENST00000640656 341 ntBASIC0.29□□□□□ -2.36
COMMD3-BMI1R4GMX3 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.29□□□□□ -2.36
COMMD3-BMI1R4GMX3 Y_RNA.148-201ENST00000363557 117 ntBASIC0.28□□□□□ -2.36
COMMD3-BMI1R4GMX3 RNU6-654P-201ENST00000364373 107 ntBASIC0.28□□□□□ -2.36
COMMD3-BMI1R4GMX3 Y_RNA.329-201ENST00000365209 107 ntBASIC0.28□□□□□ -2.36
COMMD3-BMI1R4GMX3 Y_RNA.570-201ENST00000384750 101 ntBASIC0.28□□□□□ -2.36
COMMD3-BMI1R4GMX3 RNU6-847P-201ENST00000411115 108 ntBASIC0.28□□□□□ -2.36
COMMD3-BMI1R4GMX3 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC0.28□□□□□ -2.36
COMMD3-BMI1R4GMX3 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.28□□□□□ -2.36
COMMD3-BMI1R4GMX3 AC127455.1-201ENST00000565496 145 ntBASIC0.28□□□□□ -2.36
COMMD3-BMI1R4GMX3 MIR4423-201ENST00000580922 80 ntBASIC0.28□□□□□ -2.36
COMMD3-BMI1R4GMX3 MIR4264-201ENST00000583520 66 ntBASIC0.28□□□□□ -2.36
COMMD3-BMI1R4GMX3 AC006441.5-201ENST00000612680 209 ntBASIC0.28□□□□□ -2.36
COMMD3-BMI1R4GMX3 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.27□□□□□ -2.37
COMMD3-BMI1R4GMX3 RNU6-674P-201ENST00000363831 107 ntBASIC0.27□□□□□ -2.37
COMMD3-BMI1R4GMX3 SNORA63C-201ENST00000364578 129 ntBASIC0.27□□□□□ -2.37
COMMD3-BMI1R4GMX3 Y_RNA.279-201ENST00000364763 95 ntBASIC0.27□□□□□ -2.37
COMMD3-BMI1R4GMX3 RNY1P8-201ENST00000383970 114 ntBASIC0.27□□□□□ -2.37
COMMD3-BMI1R4GMX3 RNU6-310P-201ENST00000384655 107 ntBASIC0.27□□□□□ -2.37
COMMD3-BMI1R4GMX3 Y_RNA.646-201ENST00000410980 101 ntBASIC0.27□□□□□ -2.37
COMMD3-BMI1R4GMX3 FCF1P9-201ENST00000412546 282 ntBASIC0.27□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 111.6 ms