Protein–RNA interactions for Protein: Q9Y5Q9

GTF3C3, General transcription factor 3C polypeptide 3, humanhuman

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3Q9Y5Q9 RNU6-643P-201ENST00000384018 107 ntBASIC3.04□□□□□ -1.92
GTF3C3Q9Y5Q9 SNRPGP13-201ENST00000442212 177 ntBASIC3.04□□□□□ -1.92
GTF3C3Q9Y5Q9 RNA5SP364-201ENST00000516938 78 ntBASIC3.04□□□□□ -1.92
GTF3C3Q9Y5Q9 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC3.04□□□□□ -1.92
GTF3C3Q9Y5Q9 AC097639.2-201ENST00000603159 172 ntBASIC3.04□□□□□ -1.92
GTF3C3Q9Y5Q9 MIR92B-201ENST00000607575 96 ntBASIC3.04□□□□□ -1.92
GTF3C3Q9Y5Q9 uc_338.20-201ENST00000621563 178 ntBASIC3.04□□□□□ -1.92
GTF3C3Q9Y5Q9 RNU6-457P-201ENST00000363999 107 ntBASIC3.03□□□□□ -1.92
GTF3C3Q9Y5Q9 Y_RNA.555-201ENST00000384673 110 ntBASIC3.03□□□□□ -1.92
GTF3C3Q9Y5Q9 SNRPGP14-201ENST00000435400 219 ntBASIC3.03□□□□□ -1.92
GTF3C3Q9Y5Q9 SNORD116-25-201ENST00000516517 92 ntBASIC3.03□□□□□ -1.92
GTF3C3Q9Y5Q9 MIR378D2-201ENST00000580636 98 ntBASIC3.03□□□□□ -1.92
GTF3C3Q9Y5Q9 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC3.03□□□□□ -1.92
GTF3C3Q9Y5Q9 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC3.02□□□□□ -1.93
GTF3C3Q9Y5Q9 SNORD114-30-201ENST00000364448 72 ntBASIC3.02□□□□□ -1.93
GTF3C3Q9Y5Q9 EEF1A1P41-201ENST00000414667 207 ntBASIC3.02□□□□□ -1.93
GTF3C3Q9Y5Q9 BX510359.1-201ENST00000456973 237 ntBASIC3.02□□□□□ -1.93
GTF3C3Q9Y5Q9 AC079140.2-201ENST00000506193 142 ntBASIC3.02□□□□□ -1.93
GTF3C3Q9Y5Q9 AC107027.2-201ENST00000512197 115 ntBASIC3.02□□□□□ -1.93
GTF3C3Q9Y5Q9 RN7SKP132-201ENST00000516001 208 ntBASIC3.02□□□□□ -1.93
GTF3C3Q9Y5Q9 RNU6-830P-201ENST00000516353 107 ntBASIC3.02□□□□□ -1.93
GTF3C3Q9Y5Q9 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC3.02□□□□□ -1.93
GTF3C3Q9Y5Q9 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC3.01□□□□□ -1.93
GTF3C3Q9Y5Q9 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC3.01□□□□□ -1.93
GTF3C3Q9Y5Q9 SNORA38.1-201ENST00000364172 131 ntBASIC3.01□□□□□ -1.93
GTF3C3Q9Y5Q9 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
GTF3C3Q9Y5Q9 MIR934-201ENST00000401241 83 ntBASIC3.01□□□□□ -1.93
GTF3C3Q9Y5Q9 AC106754.2-201ENST00000623006 233 ntBASIC3.01□□□□□ -1.93
GTF3C3Q9Y5Q9 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
GTF3C3Q9Y5Q9 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC3.01□□□□□ -1.93
GTF3C3Q9Y5Q9 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC3□□□□□ -1.93
GTF3C3Q9Y5Q9 AC026436.1-201ENST00000510537 270 ntBASIC3□□□□□ -1.93
GTF3C3Q9Y5Q9 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC3□□□□□ -1.93
GTF3C3Q9Y5Q9 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3□□□□□ -1.93
GTF3C3Q9Y5Q9 RNU6-693P-201ENST00000516134 107 ntBASIC3□□□□□ -1.93
GTF3C3Q9Y5Q9 Y_RNA.666-201ENST00000516187 112 ntBASIC3□□□□□ -1.93
GTF3C3Q9Y5Q9 AC090142.3-201ENST00000519012 385 ntBASIC3□□□□□ -1.93
GTF3C3Q9Y5Q9 AC090049.2-201ENST00000550377 109 ntBASIC3□□□□□ -1.93
GTF3C3Q9Y5Q9 FAM106DP-201ENST00000586416 501 ntBASIC3□□□□□ -1.93
GTF3C3Q9Y5Q9 AL513534.2-201ENST00000603836 250 ntBASIC3□□□□□ -1.93
GTF3C3Q9Y5Q9 Y_RNA.337-201ENST00000365312 102 ntBASIC2.99□□□□□ -1.93
GTF3C3Q9Y5Q9 MIR653-201ENST00000385279 96 ntBASIC2.99□□□□□ -1.93
GTF3C3Q9Y5Q9 AC006461.1-201ENST00000412637 326 ntBASIC2.99□□□□□ -1.93
GTF3C3Q9Y5Q9 AC087499.2-201ENST00000432861 149 ntBASIC2.99□□□□□ -1.93
GTF3C3Q9Y5Q9 RNU1-40P-201ENST00000516816 164 ntBASIC2.99□□□□□ -1.93
GTF3C3Q9Y5Q9 RNU1-97P-201ENST00000516872 164 ntBASIC2.99□□□□□ -1.93
GTF3C3Q9Y5Q9 MIR4422-201ENST00000581938 83 ntBASIC2.99□□□□□ -1.93
GTF3C3Q9Y5Q9 MIR6766-201ENST00000622641 72 ntBASIC2.99□□□□□ -1.93
GTF3C3Q9Y5Q9 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
GTF3C3Q9Y5Q9 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
GTF3C3Q9Y5Q9 SNORD1A-201ENST00000364968 72 ntBASIC2.98□□□□□ -1.93
GTF3C3Q9Y5Q9 RNU6-886P-201ENST00000384319 105 ntBASIC2.98□□□□□ -1.93
GTF3C3Q9Y5Q9 RNU6-1065P-201ENST00000384513 106 ntBASIC2.98□□□□□ -1.93
GTF3C3Q9Y5Q9 RNU1-78P-201ENST00000391248 165 ntBASIC2.98□□□□□ -1.93
GTF3C3Q9Y5Q9 AL451046.2-201ENST00000403074 277 ntBASIC2.98□□□□□ -1.93
GTF3C3Q9Y5Q9 MIR548O-201ENST00000408583 114 ntBASIC2.98□□□□□ -1.93
GTF3C3Q9Y5Q9 SNX2P2-201ENST00000424553 323 ntBASIC2.98□□□□□ -1.93
GTF3C3Q9Y5Q9 AC025033.1-201ENST00000463883 194 ntBASIC2.98□□□□□ -1.93
GTF3C3Q9Y5Q9 MIR3935-201ENST00000583472 104 ntBASIC2.98□□□□□ -1.93
GTF3C3Q9Y5Q9 RNU6-888P-201ENST00000363010 101 ntBASIC2.97□□□□□ -1.93
GTF3C3Q9Y5Q9 Y_RNA.521-201ENST00000384560 114 ntBASIC2.97□□□□□ -1.93
GTF3C3Q9Y5Q9 SNORA11-201ENST00000408789 128 ntBASIC2.97□□□□□ -1.93
GTF3C3Q9Y5Q9 SEPT7P4-201ENST00000437076 306 ntBASIC2.97□□□□□ -1.93
GTF3C3Q9Y5Q9 MIR3944-201ENST00000581277 108 ntBASIC2.97□□□□□ -1.93
GTF3C3Q9Y5Q9 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.97□□□□□ -1.93
GTF3C3Q9Y5Q9 RNA5SP374-201ENST00000362939 125 ntBASIC2.96□□□□□ -1.94
GTF3C3Q9Y5Q9 Y_RNA.91-201ENST00000363042 107 ntBASIC2.96□□□□□ -1.94
GTF3C3Q9Y5Q9 Y_RNA.441-201ENST00000384123 112 ntBASIC2.96□□□□□ -1.94
GTF3C3Q9Y5Q9 RNU6-1067P-201ENST00000384752 107 ntBASIC2.96□□□□□ -1.94
GTF3C3Q9Y5Q9 RNU6-239P-201ENST00000390990 99 ntBASIC2.96□□□□□ -1.94
GTF3C3Q9Y5Q9 RNU6-1135P-201ENST00000411083 103 ntBASIC2.96□□□□□ -1.94
GTF3C3Q9Y5Q9 AC005908.1-201ENST00000468701 347 ntBASIC2.96□□□□□ -1.94
GTF3C3Q9Y5Q9 AC015726.2-201ENST00000620112 122 ntBASIC2.96□□□□□ -1.94
GTF3C3Q9Y5Q9 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
GTF3C3Q9Y5Q9 SNORD61-201ENST00000384252 73 ntBASIC2.95□□□□□ -1.94
GTF3C3Q9Y5Q9 MIR516B2-201ENST00000385190 85 ntBASIC2.95□□□□□ -1.94
GTF3C3Q9Y5Q9 U4.3-201ENST00000621047 82 ntBASIC2.95□□□□□ -1.94
GTF3C3Q9Y5Q9 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC2.95□□□□□ -1.94
GTF3C3Q9Y5Q9 Y_RNA.66-201ENST00000362862 102 ntBASIC2.94□□□□□ -1.94
GTF3C3Q9Y5Q9 Y_RNA.150-201ENST00000363562 102 ntBASIC2.94□□□□□ -1.94
GTF3C3Q9Y5Q9 RNU4-84P-201ENST00000364200 139 ntBASIC2.94□□□□□ -1.94
GTF3C3Q9Y5Q9 SNORA1.2-201ENST00000365189 134 ntBASIC2.94□□□□□ -1.94
GTF3C3Q9Y5Q9 AC087499.4-201ENST00000448505 178 ntBASIC2.94□□□□□ -1.94
GTF3C3Q9Y5Q9 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.94□□□□□ -1.94
GTF3C3Q9Y5Q9 RNA5SP320-201ENST00000516263 124 ntBASIC2.94□□□□□ -1.94
GTF3C3Q9Y5Q9 AL357312.1-201ENST00000603879 298 ntBASIC2.94□□□□□ -1.94
GTF3C3Q9Y5Q9 AC007179.3-201ENST00000604976 235 ntBASIC2.94□□□□□ -1.94
GTF3C3Q9Y5Q9 AC134878.1-201ENST00000619901 243 ntBASIC2.94□□□□□ -1.94
GTF3C3Q9Y5Q9 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC2.93□□□□□ -1.94
GTF3C3Q9Y5Q9 RNA5SP68-201ENST00000363885 119 ntBASIC2.93□□□□□ -1.94
GTF3C3Q9Y5Q9 SNORD46.1-201ENST00000364139 104 ntBASIC2.93□□□□□ -1.94
GTF3C3Q9Y5Q9 Y_RNA.547-201ENST00000384654 119 ntBASIC2.93□□□□□ -1.94
GTF3C3Q9Y5Q9 MIR526A1-201ENST00000384897 85 ntBASIC2.93□□□□□ -1.94
GTF3C3Q9Y5Q9 MIR27B-201ENST00000385129 97 ntBASIC2.93□□□□□ -1.94
GTF3C3Q9Y5Q9 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC2.93□□□□□ -1.94
GTF3C3Q9Y5Q9 MIR1291-201ENST00000627649 87 ntBASIC2.93□□□□□ -1.94
GTF3C3Q9Y5Q9 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC2.93□□□□□ -1.94
GTF3C3Q9Y5Q9 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC2.93□□□□□ -1.94
GTF3C3Q9Y5Q9 MIR302D-201ENST00000362275 68 ntBASIC2.92□□□□□ -1.94
GTF3C3Q9Y5Q9 Y_RNA.180-201ENST00000363867 113 ntBASIC2.92□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms