Protein–RNA interactions for Protein: Q9Y5H4

PCDHGA1, Protocadherin gamma-A1, humanhuman

Predictions only

Length 931 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1Q9Y5H4 Y_RNA.183-201ENST00000363882 113 ntBASIC1.13□□□□□ -2.23
PCDHGA1Q9Y5H4 Y_RNA.286-201ENST00000364813 102 ntBASIC1.13□□□□□ -2.23
PCDHGA1Q9Y5H4 MIR548J-201ENST00000408833 112 ntBASIC1.13□□□□□ -2.23
PCDHGA1Q9Y5H4 MIR1252-201ENST00000408861 65 ntBASIC1.13□□□□□ -2.23
PCDHGA1Q9Y5H4 RPS29P29-201ENST00000456396 171 ntBASIC1.13□□□□□ -2.23
PCDHGA1Q9Y5H4 RNU7-115P-201ENST00000516433 55 ntBASIC1.13□□□□□ -2.23
PCDHGA1Q9Y5H4 RNU6-113P-201ENST00000516653 101 ntBASIC1.13□□□□□ -2.23
PCDHGA1Q9Y5H4 Y_RNA.721-201ENST00000517207 102 ntBASIC1.13□□□□□ -2.23
PCDHGA1Q9Y5H4 AP003357.1-201ENST00000604497 148 ntBASIC1.13□□□□□ -2.23
PCDHGA1Q9Y5H4 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
PCDHGA1Q9Y5H4 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC1.13□□□□□ -2.23
PCDHGA1Q9Y5H4 Y_RNA.222-201ENST00000364264 102 ntBASIC1.12□□□□□ -2.23
PCDHGA1Q9Y5H4 SNORD115-46-201ENST00000390982 71 ntBASIC1.12□□□□□ -2.23
PCDHGA1Q9Y5H4 RNU6-1248P-201ENST00000391096 64 ntBASIC1.12□□□□□ -2.23
PCDHGA1Q9Y5H4 MIR1298-201ENST00000408783 112 ntBASIC1.12□□□□□ -2.23
PCDHGA1Q9Y5H4 POLR2KP2-201ENST00000438155 177 ntBASIC1.12□□□□□ -2.23
PCDHGA1Q9Y5H4 RN7SKP179-201ENST00000516126 217 ntBASIC1.12□□□□□ -2.23
PCDHGA1Q9Y5H4 RNU6-897P-201ENST00000517135 105 ntBASIC1.12□□□□□ -2.23
PCDHGA1Q9Y5H4 AC024405.2-202ENST00000532731 184 ntBASIC1.12□□□□□ -2.23
PCDHGA1Q9Y5H4 RNU6-797P-201ENST00000363101 109 ntBASIC1.11□□□□□ -2.23
PCDHGA1Q9Y5H4 SNORD113-8-201ENST00000363497 74 ntBASIC1.11□□□□□ -2.23
PCDHGA1Q9Y5H4 U8.7-201ENST00000364940 136 ntBASIC1.11□□□□□ -2.23
PCDHGA1Q9Y5H4 AC117470.1-201ENST00000381974 330 ntBASIC1.11□□□□□ -2.23
PCDHGA1Q9Y5H4 SNORA22B-201ENST00000383876 138 ntBASIC1.11□□□□□ -2.23
PCDHGA1Q9Y5H4 Y_RNA.389-201ENST00000383924 113 ntBASIC1.11□□□□□ -2.23
PCDHGA1Q9Y5H4 MIR452-201ENST00000385020 85 ntBASIC1.11□□□□□ -2.23
PCDHGA1Q9Y5H4 RNU6-101P-201ENST00000410323 104 ntBASIC1.11□□□□□ -2.23
PCDHGA1Q9Y5H4 MLLT10P1-201ENST00000418346 262 ntBASIC1.11□□□□□ -2.23
PCDHGA1Q9Y5H4 SNRPGP10-201ENST00000432323 225 ntBASIC1.11□□□□□ -2.23
PCDHGA1Q9Y5H4 AC117454.1-201ENST00000491120 168 ntBASIC1.11□□□□□ -2.23
PCDHGA1Q9Y5H4 RNU6-397P-201ENST00000516226 104 ntBASIC1.11□□□□□ -2.23
PCDHGA1Q9Y5H4 SNORD45.4-201ENST00000516629 73 ntBASIC1.11□□□□□ -2.23
PCDHGA1Q9Y5H4 Y_RNA.714-201ENST00000517065 90 ntBASIC1.11□□□□□ -2.23
PCDHGA1Q9Y5H4 AC136628.3-201ENST00000521868 290 ntBASIC1.11□□□□□ -2.23
PCDHGA1Q9Y5H4 MIR4300-201ENST00000581016 96 ntBASIC1.11□□□□□ -2.23
PCDHGA1Q9Y5H4 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
PCDHGA1Q9Y5H4 RAC1P9-201ENST00000604990 392 ntBASIC1.11□□□□□ -2.23
PCDHGA1Q9Y5H4 MIR376A1-201ENST00000616574 68 ntBASIC1.11□□□□□ -2.23
PCDHGA1Q9Y5H4 NAA50-211ENST00000630058 177 ntTSL 5 BASIC1.11□□□□□ -2.23
PCDHGA1Q9Y5H4 RNU6-1084P-201ENST00000362498 107 ntBASIC1.1□□□□□ -2.23
PCDHGA1Q9Y5H4 Y_RNA.138-201ENST00000363462 102 ntBASIC1.1□□□□□ -2.23
PCDHGA1Q9Y5H4 Y_RNA.203-201ENST00000364106 102 ntBASIC1.1□□□□□ -2.23
PCDHGA1Q9Y5H4 RNU6-450P-201ENST00000364654 107 ntBASIC1.1□□□□□ -2.23
PCDHGA1Q9Y5H4 Y_RNA.336-201ENST00000365307 109 ntBASIC1.1□□□□□ -2.23
PCDHGA1Q9Y5H4 RNU6-131P-201ENST00000391144 107 ntBASIC1.1□□□□□ -2.23
PCDHGA1Q9Y5H4 MIR548P-201ENST00000408336 84 ntBASIC1.1□□□□□ -2.23
PCDHGA1Q9Y5H4 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.1□□□□□ -2.23
PCDHGA1Q9Y5H4 LINC01399-202ENST00000458450 244 ntBASIC1.1□□□□□ -2.23
PCDHGA1Q9Y5H4 RNU6-947P-201ENST00000516264 106 ntBASIC1.1□□□□□ -2.23
PCDHGA1Q9Y5H4 Y_RNA.711-201ENST00000516993 102 ntBASIC1.1□□□□□ -2.23
PCDHGA1Q9Y5H4 AC127455.1-201ENST00000565496 145 ntBASIC1.1□□□□□ -2.23
PCDHGA1Q9Y5H4 AL391516.1-201ENST00000554380 2449 ntBASIC1.09□□□□□ -2.23
PCDHGA1Q9Y5H4 Y_RNA.36-201ENST00000362602 112 ntBASIC1.09□□□□□ -2.23
PCDHGA1Q9Y5H4 RNU4-80P-201ENST00000363200 141 ntBASIC1.09□□□□□ -2.23
PCDHGA1Q9Y5H4 RNU6-801P-201ENST00000364087 105 ntBASIC1.09□□□□□ -2.23
PCDHGA1Q9Y5H4 SNORD50B-201ENST00000364995 70 ntBASIC1.09□□□□□ -2.23
PCDHGA1Q9Y5H4 snoU2-30.1-201ENST00000365012 70 ntBASIC1.09□□□□□ -2.23
PCDHGA1Q9Y5H4 Y_RNA.380-201ENST00000365663 111 ntBASIC1.09□□□□□ -2.23
PCDHGA1Q9Y5H4 MTCO2P12-201ENST00000427426 682 ntBASIC1.09□□□□□ -2.23
PCDHGA1Q9Y5H4 AC245047.7-201ENST00000440265 293 ntBASIC1.09□□□□□ -2.23
PCDHGA1Q9Y5H4 HSPE1P25-201ENST00000455484 251 ntBASIC1.09□□□□□ -2.23
PCDHGA1Q9Y5H4 AC048334.1-201ENST00000477975 159 ntBASIC1.09□□□□□ -2.23
PCDHGA1Q9Y5H4 UBL5P1-201ENST00000507979 193 ntBASIC1.09□□□□□ -2.23
PCDHGA1Q9Y5H4 SNORA31.2-201ENST00000516019 134 ntBASIC1.09□□□□□ -2.23
PCDHGA1Q9Y5H4 MIR6779-201ENST00000617283 64 ntBASIC1.09□□□□□ -2.23
PCDHGA1Q9Y5H4 MIR548AY-201ENST00000617669 107 ntBASIC1.09□□□□□ -2.23
PCDHGA1Q9Y5H4 Y_RNA.136-201ENST00000363444 102 ntBASIC1.08□□□□□ -2.24
PCDHGA1Q9Y5H4 Y_RNA.158-201ENST00000363651 101 ntBASIC1.08□□□□□ -2.24
PCDHGA1Q9Y5H4 RNU6-969P-201ENST00000383900 105 ntBASIC1.08□□□□□ -2.24
PCDHGA1Q9Y5H4 MIR19B1-201ENST00000384829 87 ntBASIC1.08□□□□□ -2.24
PCDHGA1Q9Y5H4 RPL23AP54-201ENST00000495129 419 ntBASIC1.08□□□□□ -2.24
PCDHGA1Q9Y5H4 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.08□□□□□ -2.24
PCDHGA1Q9Y5H4 RNU6-496P-201ENST00000516145 99 ntBASIC1.08□□□□□ -2.24
PCDHGA1Q9Y5H4 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC1.08□□□□□ -2.24
PCDHGA1Q9Y5H4 MIR4661-201ENST00000582720 75 ntBASIC1.08□□□□□ -2.24
PCDHGA1Q9Y5H4 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.08□□□□□ -2.24
PCDHGA1Q9Y5H4 RNU4-90P-201ENST00000362773 141 ntBASIC1.07□□□□□ -2.24
PCDHGA1Q9Y5H4 Y_RNA.418-201ENST00000384029 102 ntBASIC1.07□□□□□ -2.24
PCDHGA1Q9Y5H4 RNU6-102P-201ENST00000384485 104 ntBASIC1.07□□□□□ -2.24
PCDHGA1Q9Y5H4 SNORA80D-201ENST00000384488 135 ntBASIC1.07□□□□□ -2.24
PCDHGA1Q9Y5H4 MIR136-201ENST00000385207 82 ntBASIC1.07□□□□□ -2.24
PCDHGA1Q9Y5H4 RNU6-910P-201ENST00000390844 107 ntBASIC1.07□□□□□ -2.24
PCDHGA1Q9Y5H4 RNU6ATAC19P-201ENST00000408096 110 ntBASIC1.07□□□□□ -2.24
PCDHGA1Q9Y5H4 Y_RNA.602-201ENST00000410535 92 ntBASIC1.07□□□□□ -2.24
PCDHGA1Q9Y5H4 RNU2-14P-201ENST00000411053 191 ntBASIC1.07□□□□□ -2.24
PCDHGA1Q9Y5H4 HMGN2P32-201ENST00000444648 269 ntBASIC1.07□□□□□ -2.24
PCDHGA1Q9Y5H4 RNU7-141P-201ENST00000459304 62 ntBASIC1.07□□□□□ -2.24
PCDHGA1Q9Y5H4 RNU6-191P-201ENST00000516295 94 ntBASIC1.07□□□□□ -2.24
PCDHGA1Q9Y5H4 AC020661.2-201ENST00000560114 134 ntBASIC1.07□□□□□ -2.24
PCDHGA1Q9Y5H4 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.07□□□□□ -2.24
PCDHGA1Q9Y5H4 MIR3171-201ENST00000584270 74 ntBASIC1.07□□□□□ -2.24
PCDHGA1Q9Y5H4 AL442644.1-201ENST00000454390 3105 ntBASIC1.06□□□□□ -2.24
PCDHGA1Q9Y5H4 SNORA72.4-201ENST00000384174 132 ntBASIC1.06□□□□□ -2.24
PCDHGA1Q9Y5H4 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.06□□□□□ -2.24
PCDHGA1Q9Y5H4 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.06□□□□□ -2.24
PCDHGA1Q9Y5H4 RNU6-764P-201ENST00000516396 105 ntBASIC1.06□□□□□ -2.24
PCDHGA1Q9Y5H4 AC090142.3-201ENST00000519012 385 ntBASIC1.06□□□□□ -2.24
PCDHGA1Q9Y5H4 AC090821.2-201ENST00000523552 176 ntBASIC1.06□□□□□ -2.24
PCDHGA1Q9Y5H4 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.06□□□□□ -2.24
PCDHGA1Q9Y5H4 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC1.06□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 206.2 ms