Protein–RNA interactions for Protein: Q9UPM8

AP4E1, AP-4 complex subunit epsilon-1, humanhuman

Predictions only

Length 1,137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1Q9UPM8 Y_RNA.213-201ENST00000364178 111 ntBASIC2.86□□□□□ -1.95
AP4E1Q9UPM8 Y_RNA.440-201ENST00000384120 114 ntBASIC2.86□□□□□ -1.95
AP4E1Q9UPM8 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.86□□□□□ -1.95
AP4E1Q9UPM8 AC099677.2-201ENST00000436385 175 ntBASIC2.86□□□□□ -1.95
AP4E1Q9UPM8 AL606517.2-201ENST00000442855 241 ntBASIC2.86□□□□□ -1.95
AP4E1Q9UPM8 RNA5SP281-201ENST00000516504 135 ntBASIC2.86□□□□□ -1.95
AP4E1Q9UPM8 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC2.86□□□□□ -1.95
AP4E1Q9UPM8 MIR3616-201ENST00000584070 92 ntBASIC2.86□□□□□ -1.95
AP4E1Q9UPM8 AC005000.2-201ENST00000605468 310 ntBASIC2.86□□□□□ -1.95
AP4E1Q9UPM8 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.86□□□□□ -1.95
AP4E1Q9UPM8 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
AP4E1Q9UPM8 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC2.85□□□□□ -1.95
AP4E1Q9UPM8 RNU6-862P-201ENST00000362804 105 ntBASIC2.85□□□□□ -1.95
AP4E1Q9UPM8 snoU2-30.1-201ENST00000365012 70 ntBASIC2.85□□□□□ -1.95
AP4E1Q9UPM8 RNY1P6-201ENST00000384193 109 ntBASIC2.85□□□□□ -1.95
AP4E1Q9UPM8 SNORD88.1-201ENST00000408684 91 ntBASIC2.85□□□□□ -1.95
AP4E1Q9UPM8 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.85□□□□□ -1.95
AP4E1Q9UPM8 AL445646.1-201ENST00000431784 216 ntBASIC2.85□□□□□ -1.95
AP4E1Q9UPM8 AC087499.2-201ENST00000432861 149 ntBASIC2.85□□□□□ -1.95
AP4E1Q9UPM8 RN7SL499P-201ENST00000481141 276 ntBASIC2.85□□□□□ -1.95
AP4E1Q9UPM8 RNU6-56P-201ENST00000516986 93 ntBASIC2.85□□□□□ -1.95
AP4E1Q9UPM8 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.85□□□□□ -1.95
AP4E1Q9UPM8 MIR3169-201ENST00000578032 83 ntBASIC2.85□□□□□ -1.95
AP4E1Q9UPM8 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
AP4E1Q9UPM8 AC022513.1-201ENST00000624512 117 ntBASIC2.85□□□□□ -1.95
AP4E1Q9UPM8 AL137790.1-201ENST00000634283 177 ntBASIC2.85□□□□□ -1.95
AP4E1Q9UPM8 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.85□□□□□ -1.95
AP4E1Q9UPM8 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
AP4E1Q9UPM8 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.85□□□□□ -1.95
AP4E1Q9UPM8 RNY4P6-201ENST00000363667 96 ntBASIC2.84□□□□□ -1.95
AP4E1Q9UPM8 U8.6-201ENST00000364939 135 ntBASIC2.84□□□□□ -1.95
AP4E1Q9UPM8 Y_RNA.298-201ENST00000364960 107 ntBASIC2.84□□□□□ -1.95
AP4E1Q9UPM8 AL138827.1-201ENST00000402666 306 ntBASIC2.84□□□□□ -1.95
AP4E1Q9UPM8 Z96811.1-201ENST00000445880 108 ntBASIC2.84□□□□□ -1.95
AP4E1Q9UPM8 AL109933.2-201ENST00000452651 260 ntBASIC2.84□□□□□ -1.95
AP4E1Q9UPM8 RN7SL297P-201ENST00000483161 293 ntBASIC2.84□□□□□ -1.95
AP4E1Q9UPM8 SNORD45.4-201ENST00000516629 73 ntBASIC2.84□□□□□ -1.95
AP4E1Q9UPM8 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.84□□□□□ -1.95
AP4E1Q9UPM8 AC002984.1-201ENST00000591692 448 ntBASIC2.84□□□□□ -1.95
AP4E1Q9UPM8 AC021443.1-201ENST00000604478 211 ntBASIC2.84□□□□□ -1.95
AP4E1Q9UPM8 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.84□□□□□ -1.95
AP4E1Q9UPM8 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.84□□□□□ -1.96
AP4E1Q9UPM8 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
AP4E1Q9UPM8 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
AP4E1Q9UPM8 RNA5SP493-201ENST00000364115 91 ntBASIC2.83□□□□□ -1.96
AP4E1Q9UPM8 Y_RNA.336-201ENST00000365307 109 ntBASIC2.83□□□□□ -1.96
AP4E1Q9UPM8 SNORA11.2-201ENST00000408318 127 ntBASIC2.83□□□□□ -1.96
AP4E1Q9UPM8 AC245047.3-201ENST00000429428 127 ntBASIC2.83□□□□□ -1.96
AP4E1Q9UPM8 IGKV3-31-201ENST00000523109 329 ntBASIC2.83□□□□□ -1.96
AP4E1Q9UPM8 AC079600.2-201ENST00000550076 130 ntBASIC2.83□□□□□ -1.96
AP4E1Q9UPM8 AC024614.2-201ENST00000577584 372 ntBASIC2.83□□□□□ -1.96
AP4E1Q9UPM8 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
AP4E1Q9UPM8 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.82□□□□□ -1.96
AP4E1Q9UPM8 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.82□□□□□ -1.96
AP4E1Q9UPM8 RNU6-1084P-201ENST00000362498 107 ntBASIC2.82□□□□□ -1.96
AP4E1Q9UPM8 RNU6-414P-201ENST00000363705 104 ntBASIC2.82□□□□□ -1.96
AP4E1Q9UPM8 RNU1-112P-201ENST00000364401 164 ntBASIC2.82□□□□□ -1.96
AP4E1Q9UPM8 RNU6-1131P-201ENST00000364955 107 ntBASIC2.82□□□□□ -1.96
AP4E1Q9UPM8 RNU6-49P-201ENST00000384256 107 ntBASIC2.82□□□□□ -1.96
AP4E1Q9UPM8 SNORA80E-201ENST00000384744 137 ntBASIC2.82□□□□□ -1.96
AP4E1Q9UPM8 MIR627-201ENST00000384979 97 ntBASIC2.82□□□□□ -1.96
AP4E1Q9UPM8 RNA5SP482-201ENST00000391269 118 ntBASIC2.82□□□□□ -1.96
AP4E1Q9UPM8 AC107083.1-201ENST00000439643 279 ntBASIC2.82□□□□□ -1.96
AP4E1Q9UPM8 AL049873.1-201ENST00000480540 376 ntBASIC2.82□□□□□ -1.96
AP4E1Q9UPM8 RNU7-123P-201ENST00000515911 60 ntBASIC2.82□□□□□ -1.96
AP4E1Q9UPM8 RNA5SP367-201ENST00000516557 118 ntBASIC2.82□□□□□ -1.96
AP4E1Q9UPM8 SUMO2P16-201ENST00000519475 264 ntBASIC2.82□□□□□ -1.96
AP4E1Q9UPM8 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
AP4E1Q9UPM8 MIR5009-201ENST00000578736 100 ntBASIC2.82□□□□□ -1.96
AP4E1Q9UPM8 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.82□□□□□ -1.96
AP4E1Q9UPM8 U4atac.1-201ENST00000618345 95 ntBASIC2.82□□□□□ -1.96
AP4E1Q9UPM8 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.82□□□□□ -1.96
AP4E1Q9UPM8 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.82□□□□□ -1.96
AP4E1Q9UPM8 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
AP4E1Q9UPM8 SNORD73B-201ENST00000364394 72 ntBASIC2.81□□□□□ -1.96
AP4E1Q9UPM8 RNU1-133P-201ENST00000364867 167 ntBASIC2.81□□□□□ -1.96
AP4E1Q9UPM8 Y_RNA.344-201ENST00000365381 112 ntBASIC2.81□□□□□ -1.96
AP4E1Q9UPM8 Y_RNA.544-201ENST00000384650 113 ntBASIC2.81□□□□□ -1.96
AP4E1Q9UPM8 RNA5SP21-201ENST00000410917 96 ntBASIC2.81□□□□□ -1.96
AP4E1Q9UPM8 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.81□□□□□ -1.96
AP4E1Q9UPM8 AC009238.1-201ENST00000442165 424 ntBASIC2.81□□□□□ -1.96
AP4E1Q9UPM8 AC009237.6-201ENST00000446969 424 ntBASIC2.81□□□□□ -1.96
AP4E1Q9UPM8 SNORA40.13-201ENST00000516379 120 ntBASIC2.81□□□□□ -1.96
AP4E1Q9UPM8 AP003484.1-201ENST00000530974 250 ntBASIC2.81□□□□□ -1.96
AP4E1Q9UPM8 AC015726.2-201ENST00000620112 122 ntBASIC2.81□□□□□ -1.96
AP4E1Q9UPM8 AL442644.1-201ENST00000454390 3105 ntBASIC2.8□□□□□ -1.96
AP4E1Q9UPM8 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
AP4E1Q9UPM8 RNU6-294P-201ENST00000364999 102 ntBASIC2.8□□□□□ -1.96
AP4E1Q9UPM8 RNU6-1113P-201ENST00000384348 107 ntBASIC2.8□□□□□ -1.96
AP4E1Q9UPM8 RNU6-1104P-201ENST00000384723 104 ntBASIC2.8□□□□□ -1.96
AP4E1Q9UPM8 SNORA19.1-201ENST00000410656 129 ntBASIC2.8□□□□□ -1.96
AP4E1Q9UPM8 AC105272.1-201ENST00000438604 198 ntBASIC2.8□□□□□ -1.96
AP4E1Q9UPM8 RNU7-164P-201ENST00000459221 62 ntBASIC2.8□□□□□ -1.96
AP4E1Q9UPM8 AC068339.1-201ENST00000526965 141 ntBASIC2.8□□□□□ -1.96
AP4E1Q9UPM8 AC084364.2-201ENST00000546924 395 ntBASIC2.8□□□□□ -1.96
AP4E1Q9UPM8 AC022523.2-201ENST00000561045 150 ntBASIC2.8□□□□□ -1.96
AP4E1Q9UPM8 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.8□□□□□ -1.96
AP4E1Q9UPM8 AC091932.4-201ENST00000623386 200 ntBASIC2.8□□□□□ -1.96
AP4E1Q9UPM8 SCARNA15.3-201ENST00000626315 122 ntBASIC2.8□□□□□ -1.96
AP4E1Q9UPM8 SCARNA4.1-201ENST00000628597 123 ntBASIC2.8□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 177.2 ms