Protein–RNA interactions for Protein: Q9UL40

ZNF346, Zinc finger protein 346, humanhuman

Known RBP Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF346Q9UL40 AC090049.2-201ENST00000550377 109 ntBASIC1.16□□□□□ -2.22
ZNF346Q9UL40 MIR3664-201ENST00000579074 99 ntBASIC1.16□□□□□ -2.22
ZNF346Q9UL40 MIR8065-201ENST00000620577 100 ntBASIC1.16□□□□□ -2.22
ZNF346Q9UL40 MIR8062-201ENST00000621515 85 ntBASIC1.16□□□□□ -2.22
ZNF346Q9UL40 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC1.16□□□□□ -2.22
ZNF346Q9UL40 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.16□□□□□ -2.22
ZNF346Q9UL40 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
ZNF346Q9UL40 SNORA25.1-201ENST00000362326 128 ntBASIC1.15□□□□□ -2.23
ZNF346Q9UL40 SNORA2.2-201ENST00000365473 135 ntBASIC1.15□□□□□ -2.23
ZNF346Q9UL40 RNU6-144P-201ENST00000383951 107 ntBASIC1.15□□□□□ -2.23
ZNF346Q9UL40 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.15□□□□□ -2.23
ZNF346Q9UL40 DYNLT3P2-201ENST00000442517 295 ntBASIC1.15□□□□□ -2.23
ZNF346Q9UL40 RNU6-437P-201ENST00000459408 95 ntBASIC1.15□□□□□ -2.23
ZNF346Q9UL40 Y_RNA.637-201ENST00000459424 114 ntBASIC1.15□□□□□ -2.23
ZNF346Q9UL40 AC092991.1-201ENST00000477176 376 ntBASIC1.15□□□□□ -2.23
ZNF346Q9UL40 AC117454.1-201ENST00000491120 168 ntBASIC1.15□□□□□ -2.23
ZNF346Q9UL40 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC1.15□□□□□ -2.23
ZNF346Q9UL40 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC1.15□□□□□ -2.23
ZNF346Q9UL40 AC019288.1-201ENST00000557918 224 ntBASIC1.15□□□□□ -2.23
ZNF346Q9UL40 AC005357.1-201ENST00000588399 301 ntBASIC1.15□□□□□ -2.23
ZNF346Q9UL40 AC136443.5-201ENST00000603741 370 ntBASIC1.15□□□□□ -2.23
ZNF346Q9UL40 AL359821.1-201ENST00000605519 182 ntBASIC1.15□□□□□ -2.23
ZNF346Q9UL40 AL353770.2-201ENST00000620024 78 ntBASIC1.15□□□□□ -2.23
ZNF346Q9UL40 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.14□□□□□ -2.23
ZNF346Q9UL40 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC1.14□□□□□ -2.23
ZNF346Q9UL40 MIR337-201ENST00000362281 93 ntBASIC1.14□□□□□ -2.23
ZNF346Q9UL40 Y_RNA.796-201ENST00000364268 102 ntBASIC1.14□□□□□ -2.23
ZNF346Q9UL40 SNORA25.8-201ENST00000364831 128 ntBASIC1.14□□□□□ -2.23
ZNF346Q9UL40 Y_RNA.799-201ENST00000364992 102 ntBASIC1.14□□□□□ -2.23
ZNF346Q9UL40 RNU6-472P-201ENST00000384299 107 ntBASIC1.14□□□□□ -2.23
ZNF346Q9UL40 Y_RNA.574-201ENST00000384766 95 ntBASIC1.14□□□□□ -2.23
ZNF346Q9UL40 RNU6-763P-201ENST00000390865 106 ntBASIC1.14□□□□□ -2.23
ZNF346Q9UL40 MIR891A-201ENST00000401237 79 ntBASIC1.14□□□□□ -2.23
ZNF346Q9UL40 AL078595.1-201ENST00000404458 226 ntBASIC1.14□□□□□ -2.23
ZNF346Q9UL40 SNORA36B-201ENST00000410438 131 ntBASIC1.14□□□□□ -2.23
ZNF346Q9UL40 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.14□□□□□ -2.23
ZNF346Q9UL40 RN7SKP88-201ENST00000516847 250 ntBASIC1.14□□□□□ -2.23
ZNF346Q9UL40 MIR5688-201ENST00000580619 83 ntBASIC1.14□□□□□ -2.23
ZNF346Q9UL40 MIR2681-201ENST00000581814 105 ntBASIC1.14□□□□□ -2.23
ZNF346Q9UL40 MIR6078-201ENST00000611069 100 ntBASIC1.14□□□□□ -2.23
ZNF346Q9UL40 7SK.8-201ENST00000612110 250 ntBASIC1.14□□□□□ -2.23
ZNF346Q9UL40 7SK.11-201ENST00000615477 250 ntBASIC1.14□□□□□ -2.23
ZNF346Q9UL40 AC013791.1-201ENST00000616619 62 ntBASIC1.14□□□□□ -2.23
ZNF346Q9UL40 AC007742.2-201ENST00000618226 398 ntBASIC1.14□□□□□ -2.23
ZNF346Q9UL40 7SK.13-201ENST00000622040 250 ntBASIC1.14□□□□□ -2.23
ZNF346Q9UL40 NAA50-211ENST00000630058 177 ntTSL 5 BASIC1.14□□□□□ -2.23
ZNF346Q9UL40 Y_RNA.16-201ENST00000362421 102 ntBASIC1.13□□□□□ -2.23
ZNF346Q9UL40 RNY1P10-201ENST00000363268 113 ntBASIC1.13□□□□□ -2.23
ZNF346Q9UL40 Y_RNA.275-201ENST00000364726 110 ntBASIC1.13□□□□□ -2.23
ZNF346Q9UL40 Y_RNA.376-201ENST00000365638 108 ntBASIC1.13□□□□□ -2.23
ZNF346Q9UL40 SNORD41-201ENST00000386967 70 ntBASIC1.13□□□□□ -2.23
ZNF346Q9UL40 HMGN2P32-201ENST00000444648 269 ntBASIC1.13□□□□□ -2.23
ZNF346Q9UL40 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.13□□□□□ -2.23
ZNF346Q9UL40 TRBVB-201ENST00000477100 408 ntBASIC1.13□□□□□ -2.23
ZNF346Q9UL40 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.13□□□□□ -2.23
ZNF346Q9UL40 RPL23AP54-201ENST00000495129 419 ntBASIC1.13□□□□□ -2.23
ZNF346Q9UL40 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC1.13□□□□□ -2.23
ZNF346Q9UL40 RNU7-12P-201ENST00000516030 62 ntBASIC1.13□□□□□ -2.23
ZNF346Q9UL40 RNU6-917P-201ENST00000516294 104 ntBASIC1.13□□□□□ -2.23
ZNF346Q9UL40 SCARNA15.1-201ENST00000516384 125 ntBASIC1.13□□□□□ -2.23
ZNF346Q9UL40 Y_RNA.714-201ENST00000517065 90 ntBASIC1.13□□□□□ -2.23
ZNF346Q9UL40 MIR4778-201ENST00000577635 80 ntBASIC1.13□□□□□ -2.23
ZNF346Q9UL40 AL512605.2-201ENST00000592972 256 ntBASIC1.13□□□□□ -2.23
ZNF346Q9UL40 AL021707.8-201ENST00000609428 183 ntBASIC1.13□□□□□ -2.23
ZNF346Q9UL40 RNA5SP327-201ENST00000362494 101 ntBASIC1.12□□□□□ -2.23
ZNF346Q9UL40 SNORD68-201ENST00000363214 84 ntBASIC1.12□□□□□ -2.23
ZNF346Q9UL40 Y_RNA.336-201ENST00000365307 109 ntBASIC1.12□□□□□ -2.23
ZNF346Q9UL40 RNU6-514P-201ENST00000384208 107 ntBASIC1.12□□□□□ -2.23
ZNF346Q9UL40 RNU6-713P-201ENST00000384761 107 ntBASIC1.12□□□□□ -2.23
ZNF346Q9UL40 MIR452-201ENST00000385020 85 ntBASIC1.12□□□□□ -2.23
ZNF346Q9UL40 MIR618-201ENST00000385287 98 ntBASIC1.12□□□□□ -2.23
ZNF346Q9UL40 SNORA40.6-201ENST00000391153 128 ntBASIC1.12□□□□□ -2.23
ZNF346Q9UL40 Y_RNA.621-201ENST00000411065 96 ntBASIC1.12□□□□□ -2.23
ZNF346Q9UL40 SNRPGP10-201ENST00000432323 225 ntBASIC1.12□□□□□ -2.23
ZNF346Q9UL40 SNORD2.1-201ENST00000458762 69 ntBASIC1.12□□□□□ -2.23
ZNF346Q9UL40 SNORD11-201ENST00000459124 84 ntBASIC1.12□□□□□ -2.23
ZNF346Q9UL40 AC114811.1-201ENST00000507207 168 ntBASIC1.12□□□□□ -2.23
ZNF346Q9UL40 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC1.12□□□□□ -2.23
ZNF346Q9UL40 MTCO2P24-201ENST00000515611 426 ntBASIC1.12□□□□□ -2.23
ZNF346Q9UL40 RNU6-635P-201ENST00000516651 102 ntBASIC1.12□□□□□ -2.23
ZNF346Q9UL40 RNU6-165P-201ENST00000517170 99 ntBASIC1.12□□□□□ -2.23
ZNF346Q9UL40 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC1.12□□□□□ -2.23
ZNF346Q9UL40 AC008737.2-201ENST00000599446 118 ntBASIC1.12□□□□□ -2.23
ZNF346Q9UL40 AL360085.1-201ENST00000604713 532 ntBASIC1.12□□□□□ -2.23
ZNF346Q9UL40 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
ZNF346Q9UL40 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.11□□□□□ -2.23
ZNF346Q9UL40 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
ZNF346Q9UL40 Y_RNA.82-201ENST00000363000 102 ntBASIC1.11□□□□□ -2.23
ZNF346Q9UL40 Y_RNA.92-201ENST00000363043 102 ntBASIC1.11□□□□□ -2.23
ZNF346Q9UL40 Y_RNA.133-201ENST00000363428 110 ntBASIC1.11□□□□□ -2.23
ZNF346Q9UL40 RNU6-1209P-201ENST00000363655 107 ntBASIC1.11□□□□□ -2.23
ZNF346Q9UL40 RNU6-1048P-201ENST00000364054 107 ntBASIC1.11□□□□□ -2.23
ZNF346Q9UL40 Y_RNA.235-201ENST00000364412 102 ntBASIC1.11□□□□□ -2.23
ZNF346Q9UL40 Y_RNA.306-201ENST00000365015 102 ntBASIC1.11□□□□□ -2.23
ZNF346Q9UL40 Y_RNA.312-201ENST00000365089 102 ntBASIC1.11□□□□□ -2.23
ZNF346Q9UL40 Y_RNA.322-201ENST00000365151 102 ntBASIC1.11□□□□□ -2.23
ZNF346Q9UL40 Y_RNA.327-201ENST00000365201 102 ntBASIC1.11□□□□□ -2.23
ZNF346Q9UL40 RNU6-939P-201ENST00000384634 107 ntBASIC1.11□□□□□ -2.23
ZNF346Q9UL40 MIR526A1-201ENST00000384897 85 ntBASIC1.11□□□□□ -2.23
ZNF346Q9UL40 RNU6-131P-201ENST00000391144 107 ntBASIC1.11□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 116.5 ms