Protein–RNA interactions for Protein: Q9UKV0

HDAC9, Histone deacetylase 9, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9Q9UKV0 PLD1-217ENST00000627725 174 ntTSL 5 BASIC2.09□□□□□ -2.07
HDAC9Q9UKV0 Y_RNA.292-201ENST00000364904 97 ntBASIC2.08□□□□□ -2.08
HDAC9Q9UKV0 RNY4P28-201ENST00000365281 93 ntBASIC2.08□□□□□ -2.08
HDAC9Q9UKV0 MIR934-201ENST00000401241 83 ntBASIC2.08□□□□□ -2.08
HDAC9Q9UKV0 SNORA36B-201ENST00000410438 131 ntBASIC2.08□□□□□ -2.08
HDAC9Q9UKV0 AC245047.3-201ENST00000429428 127 ntBASIC2.08□□□□□ -2.08
HDAC9Q9UKV0 Y_RNA.679-201ENST00000516416 91 ntBASIC2.08□□□□□ -2.08
HDAC9Q9UKV0 SNORA31.10-201ENST00000516482 106 ntBASIC2.08□□□□□ -2.08
HDAC9Q9UKV0 AL358944.1-201ENST00000528537 144 ntBASIC2.08□□□□□ -2.08
HDAC9Q9UKV0 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC2.08□□□□□ -2.08
HDAC9Q9UKV0 AC009779.6-201ENST00000603972 165 ntBASIC2.08□□□□□ -2.08
HDAC9Q9UKV0 AC141273.2-201ENST00000618989 130 ntBASIC2.08□□□□□ -2.08
HDAC9Q9UKV0 SNORA1B-201ENST00000362535 133 ntBASIC2.07□□□□□ -2.08
HDAC9Q9UKV0 Y_RNA.267-201ENST00000364679 109 ntBASIC2.07□□□□□ -2.08
HDAC9Q9UKV0 Y_RNA.304-201ENST00000365011 112 ntBASIC2.07□□□□□ -2.08
HDAC9Q9UKV0 SNORA4.2-201ENST00000365313 147 ntBASIC2.07□□□□□ -2.08
HDAC9Q9UKV0 MIR562-201ENST00000384894 95 ntBASIC2.07□□□□□ -2.08
HDAC9Q9UKV0 MIR30A-201ENST00000385092 71 ntBASIC2.07□□□□□ -2.08
HDAC9Q9UKV0 HMGN1P7-201ENST00000491722 313 ntBASIC2.07□□□□□ -2.08
HDAC9Q9UKV0 RN7SL274P-201ENST00000492268 272 ntBASIC2.07□□□□□ -2.08
HDAC9Q9UKV0 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC2.07□□□□□ -2.08
HDAC9Q9UKV0 SNORA31.17-201ENST00000516953 127 ntBASIC2.07□□□□□ -2.08
HDAC9Q9UKV0 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC2.07□□□□□ -2.08
HDAC9Q9UKV0 AL929325.1-201ENST00000603096 117 ntBASIC2.07□□□□□ -2.08
HDAC9Q9UKV0 MIR8054-201ENST00000620877 86 ntBASIC2.07□□□□□ -2.08
HDAC9Q9UKV0 SNORD114-26-201ENST00000363543 72 ntBASIC2.06□□□□□ -2.08
HDAC9Q9UKV0 SNORA12.1-201ENST00000390873 148 ntBASIC2.06□□□□□ -2.08
HDAC9Q9UKV0 HSPE1P9-201ENST00000440046 311 ntBASIC2.06□□□□□ -2.08
HDAC9Q9UKV0 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC2.06□□□□□ -2.08
HDAC9Q9UKV0 RPL23AP54-201ENST00000495129 419 ntBASIC2.06□□□□□ -2.08
HDAC9Q9UKV0 AP002004.2-201ENST00000531656 154 ntBASIC2.06□□□□□ -2.08
HDAC9Q9UKV0 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC2.06□□□□□ -2.08
HDAC9Q9UKV0 MIR6779-201ENST00000617283 64 ntBASIC2.06□□□□□ -2.08
HDAC9Q9UKV0 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC2.06□□□□□ -2.08
HDAC9Q9UKV0 RNU6-1205P-201ENST00000363625 106 ntBASIC2.05□□□□□ -2.08
HDAC9Q9UKV0 RNU6-674P-201ENST00000363831 107 ntBASIC2.05□□□□□ -2.08
HDAC9Q9UKV0 RNU6-144P-201ENST00000383951 107 ntBASIC2.05□□□□□ -2.08
HDAC9Q9UKV0 RNU6-1080P-201ENST00000383982 107 ntBASIC2.05□□□□□ -2.08
HDAC9Q9UKV0 Y_RNA.552-201ENST00000384665 112 ntBASIC2.05□□□□□ -2.08
HDAC9Q9UKV0 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC2.05□□□□□ -2.08
HDAC9Q9UKV0 RPL31P63-201ENST00000422565 375 ntBASIC2.05□□□□□ -2.08
HDAC9Q9UKV0 AC233266.1-201ENST00000454518 96 ntBASIC2.05□□□□□ -2.08
HDAC9Q9UKV0 AC100767.1-201ENST00000528178 123 ntBASIC2.05□□□□□ -2.08
HDAC9Q9UKV0 CBX3P4-201ENST00000538909 354 ntBASIC2.05□□□□□ -2.08
HDAC9Q9UKV0 AC242852.1-201ENST00000612151 96 ntBASIC2.05□□□□□ -2.08
HDAC9Q9UKV0 AL365265.1-201ENST00000621045 234 ntBASIC2.05□□□□□ -2.08
HDAC9Q9UKV0 AC244015.1-201ENST00000622301 99 ntBASIC2.05□□□□□ -2.08
HDAC9Q9UKV0 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC2.05□□□□□ -2.08
HDAC9Q9UKV0 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.04□□□□□ -2.08
HDAC9Q9UKV0 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
HDAC9Q9UKV0 RNU6-653P-201ENST00000363074 106 ntBASIC2.04□□□□□ -2.08
HDAC9Q9UKV0 RNU2-7P-201ENST00000410794 178 ntBASIC2.04□□□□□ -2.08
HDAC9Q9UKV0 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC2.04□□□□□ -2.08
HDAC9Q9UKV0 RNU6-437P-201ENST00000459408 95 ntBASIC2.04□□□□□ -2.08
HDAC9Q9UKV0 COX6CP14-201ENST00000469580 174 ntBASIC2.04□□□□□ -2.08
HDAC9Q9UKV0 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
HDAC9Q9UKV0 RNA5SP102-201ENST00000516865 106 ntBASIC2.04□□□□□ -2.08
HDAC9Q9UKV0 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC2.04□□□□□ -2.08
HDAC9Q9UKV0 MIR4419B-201ENST00000577260 68 ntBASIC2.04□□□□□ -2.08
HDAC9Q9UKV0 SNORD53B-201ENST00000577887 78 ntBASIC2.04□□□□□ -2.08
HDAC9Q9UKV0 uc_338.20-201ENST00000621563 178 ntBASIC2.04□□□□□ -2.08
HDAC9Q9UKV0 Y_RNA.257-201ENST00000364596 102 ntBASIC2.03□□□□□ -2.08
HDAC9Q9UKV0 RNU6-440P-201ENST00000390882 105 ntBASIC2.03□□□□□ -2.08
HDAC9Q9UKV0 Y_RNA.626-201ENST00000411288 95 ntBASIC2.03□□□□□ -2.08
HDAC9Q9UKV0 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.03□□□□□ -2.08
HDAC9Q9UKV0 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC2.03□□□□□ -2.08
HDAC9Q9UKV0 AC130289.1-201ENST00000577321 73 ntBASIC2.03□□□□□ -2.08
HDAC9Q9UKV0 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
HDAC9Q9UKV0 Y_RNA.203-201ENST00000364106 102 ntBASIC2.02□□□□□ -2.09
HDAC9Q9UKV0 RNU4-10P-201ENST00000364383 140 ntBASIC2.02□□□□□ -2.09
HDAC9Q9UKV0 Y_RNA.293-201ENST00000364908 93 ntBASIC2.02□□□□□ -2.09
HDAC9Q9UKV0 MIR526A2-201ENST00000390198 65 ntBASIC2.02□□□□□ -2.09
HDAC9Q9UKV0 MIR1298-201ENST00000408783 112 ntBASIC2.02□□□□□ -2.09
HDAC9Q9UKV0 RNU1-123P-201ENST00000458950 160 ntBASIC2.02□□□□□ -2.09
HDAC9Q9UKV0 RNA5SP481-201ENST00000516814 122 ntBASIC2.02□□□□□ -2.09
HDAC9Q9UKV0 RNU2-56P-201ENST00000516826 190 ntBASIC2.02□□□□□ -2.09
HDAC9Q9UKV0 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC2.02□□□□□ -2.09
HDAC9Q9UKV0 MIR3618-201ENST00000580330 88 ntBASIC2.02□□□□□ -2.09
HDAC9Q9UKV0 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
HDAC9Q9UKV0 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
HDAC9Q9UKV0 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.01□□□□□ -2.09
HDAC9Q9UKV0 Y_RNA.253-201ENST00000364562 112 ntBASIC2.01□□□□□ -2.09
HDAC9Q9UKV0 RNU6-1318P-201ENST00000365389 103 ntBASIC2.01□□□□□ -2.09
HDAC9Q9UKV0 RNU6-847P-201ENST00000411115 108 ntBASIC2.01□□□□□ -2.09
HDAC9Q9UKV0 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC2.01□□□□□ -2.09
HDAC9Q9UKV0 AL049830.1-201ENST00000468034 425 ntBASIC2.01□□□□□ -2.09
HDAC9Q9UKV0 AC090425.1-201ENST00000610007 140 ntBASIC2.01□□□□□ -2.09
HDAC9Q9UKV0 Y_RNA.802-201ENST00000614892 130 ntBASIC2.01□□□□□ -2.09
HDAC9Q9UKV0 MIR8074-201ENST00000615081 81 ntBASIC2.01□□□□□ -2.09
HDAC9Q9UKV0 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC2.01□□□□□ -2.09
HDAC9Q9UKV0 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC2.01□□□□□ -2.09
HDAC9Q9UKV0 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
HDAC9Q9UKV0 SNORA7.1-201ENST00000363750 139 ntBASIC2□□□□□ -2.09
HDAC9Q9UKV0 Y_RNA.200-201ENST00000364018 102 ntBASIC2□□□□□ -2.09
HDAC9Q9UKV0 RNU4-41P-201ENST00000364426 143 ntBASIC2□□□□□ -2.09
HDAC9Q9UKV0 RNU6-969P-201ENST00000383900 105 ntBASIC2□□□□□ -2.09
HDAC9Q9UKV0 Y_RNA.515-201ENST00000384535 112 ntBASIC2□□□□□ -2.09
HDAC9Q9UKV0 MIR626-201ENST00000385032 94 ntBASIC2□□□□□ -2.09
HDAC9Q9UKV0 RNU6-383P-201ENST00000410864 94 ntBASIC2□□□□□ -2.09
HDAC9Q9UKV0 Y_RNA.621-201ENST00000411065 96 ntBASIC2□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 107.8 ms