Protein–RNA interactions for Protein: Q9UKN8

GTF3C4, General transcription factor 3C polypeptide 4, humanhuman

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C4Q9UKN8 TRBVB-201ENST00000477100 408 ntBASIC1.31□□□□□ -2.2
GTF3C4Q9UKN8 AC092991.1-201ENST00000477176 376 ntBASIC1.31□□□□□ -2.2
GTF3C4Q9UKN8 AC091959.1-201ENST00000495857 238 ntBASIC1.31□□□□□ -2.2
GTF3C4Q9UKN8 MTCO2P24-201ENST00000515611 426 ntBASIC1.31□□□□□ -2.2
GTF3C4Q9UKN8 RNU2-56P-201ENST00000516826 190 ntBASIC1.31□□□□□ -2.2
GTF3C4Q9UKN8 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC1.31□□□□□ -2.2
GTF3C4Q9UKN8 AC012433.1-201ENST00000588916 398 ntBASIC1.31□□□□□ -2.2
GTF3C4Q9UKN8 AC091895.1-201ENST00000624494 256 ntBASIC1.31□□□□□ -2.2
GTF3C4Q9UKN8 SNORA1B-201ENST00000362535 133 ntBASIC1.3□□□□□ -2.2
GTF3C4Q9UKN8 RNU4-90P-201ENST00000362773 141 ntBASIC1.3□□□□□ -2.2
GTF3C4Q9UKN8 RNU4-10P-201ENST00000364383 140 ntBASIC1.3□□□□□ -2.2
GTF3C4Q9UKN8 U8.7-201ENST00000364940 136 ntBASIC1.3□□□□□ -2.2
GTF3C4Q9UKN8 Y_RNA.477-201ENST00000384352 108 ntBASIC1.3□□□□□ -2.2
GTF3C4Q9UKN8 RNU6-376P-201ENST00000384731 106 ntBASIC1.3□□□□□ -2.2
GTF3C4Q9UKN8 RNU6-763P-201ENST00000390865 106 ntBASIC1.3□□□□□ -2.2
GTF3C4Q9UKN8 Y_RNA.637-201ENST00000459424 114 ntBASIC1.3□□□□□ -2.2
GTF3C4Q9UKN8 AC117454.1-201ENST00000491120 168 ntBASIC1.3□□□□□ -2.2
GTF3C4Q9UKN8 HMGN1P7-201ENST00000491722 313 ntBASIC1.3□□□□□ -2.2
GTF3C4Q9UKN8 AL133373.1-201ENST00000497098 94 ntBASIC1.3□□□□□ -2.2
GTF3C4Q9UKN8 RNU7-40P-201ENST00000516397 64 ntBASIC1.3□□□□□ -2.2
GTF3C4Q9UKN8 RNU7-28P-201ENST00000516759 62 ntBASIC1.3□□□□□ -2.2
GTF3C4Q9UKN8 RNU6-341P-201ENST00000516973 96 ntBASIC1.3□□□□□ -2.2
GTF3C4Q9UKN8 RNU6-1116P-201ENST00000517269 99 ntBASIC1.3□□□□□ -2.2
GTF3C4Q9UKN8 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
GTF3C4Q9UKN8 Y_RNA.176-201ENST00000363815 109 ntBASIC1.29□□□□□ -2.2
GTF3C4Q9UKN8 Y_RNA.193-201ENST00000363979 102 ntBASIC1.29□□□□□ -2.2
GTF3C4Q9UKN8 Y_RNA.572-201ENST00000384757 98 ntBASIC1.29□□□□□ -2.2
GTF3C4Q9UKN8 RNU6ATAC19P-201ENST00000408096 110 ntBASIC1.29□□□□□ -2.2
GTF3C4Q9UKN8 HSPE1P13-201ENST00000451143 297 ntBASIC1.29□□□□□ -2.2
GTF3C4Q9UKN8 AC233266.1-201ENST00000454518 96 ntBASIC1.29□□□□□ -2.2
GTF3C4Q9UKN8 RNA5SP168-201ENST00000516642 112 ntBASIC1.29□□□□□ -2.2
GTF3C4Q9UKN8 RNU6-1096P-201ENST00000517089 102 ntBASIC1.29□□□□□ -2.2
GTF3C4Q9UKN8 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.29□□□□□ -2.2
GTF3C4Q9UKN8 MIR4778-201ENST00000577635 80 ntBASIC1.29□□□□□ -2.2
GTF3C4Q9UKN8 AL162730.1-201ENST00000605734 292 ntBASIC1.29□□□□□ -2.2
GTF3C4Q9UKN8 AL008718.3-201ENST00000610217 321 ntBASIC1.29□□□□□ -2.2
GTF3C4Q9UKN8 AC242852.1-201ENST00000612151 96 ntBASIC1.29□□□□□ -2.2
GTF3C4Q9UKN8 AC244015.1-201ENST00000622301 99 ntBASIC1.29□□□□□ -2.2
GTF3C4Q9UKN8 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC1.28□□□□□ -2.2
GTF3C4Q9UKN8 RNU6-199P-201ENST00000362954 107 ntBASIC1.28□□□□□ -2.2
GTF3C4Q9UKN8 Y_RNA.152-201ENST00000363578 100 ntBASIC1.28□□□□□ -2.2
GTF3C4Q9UKN8 Y_RNA.238-201ENST00000364441 102 ntBASIC1.28□□□□□ -2.2
GTF3C4Q9UKN8 Y_RNA.341-201ENST00000365341 102 ntBASIC1.28□□□□□ -2.2
GTF3C4Q9UKN8 MTCO2P33-201ENST00000402100 465 ntBASIC1.28□□□□□ -2.2
GTF3C4Q9UKN8 AL162725.1-201ENST00000435405 301 ntBASIC1.28□□□□□ -2.2
GTF3C4Q9UKN8 AC104332.1-201ENST00000440471 797 ntBASIC1.28□□□□□ -2.2
GTF3C4Q9UKN8 RNU7-141P-201ENST00000459304 62 ntBASIC1.28□□□□□ -2.2
GTF3C4Q9UKN8 SERF1AP1-201ENST00000514575 187 ntBASIC1.28□□□□□ -2.2
GTF3C4Q9UKN8 RNU6-1278P-201ENST00000516130 107 ntBASIC1.28□□□□□ -2.2
GTF3C4Q9UKN8 RNU6-922P-201ENST00000516753 99 ntBASIC1.28□□□□□ -2.2
GTF3C4Q9UKN8 RNU2-31P-201ENST00000516954 155 ntBASIC1.28□□□□□ -2.2
GTF3C4Q9UKN8 RNU6-165P-201ENST00000517170 99 ntBASIC1.28□□□□□ -2.2
GTF3C4Q9UKN8 GHRLOS.1-201ENST00000610995 70 ntBASIC1.28□□□□□ -2.2
GTF3C4Q9UKN8 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.27□□□□□ -2.21
GTF3C4Q9UKN8 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.27□□□□□ -2.21
GTF3C4Q9UKN8 Y_RNA.136-201ENST00000363444 102 ntBASIC1.27□□□□□ -2.21
GTF3C4Q9UKN8 Y_RNA.149-201ENST00000363558 117 ntBASIC1.27□□□□□ -2.21
GTF3C4Q9UKN8 RNU6-740P-201ENST00000364734 105 ntBASIC1.27□□□□□ -2.21
GTF3C4Q9UKN8 Y_RNA.368-201ENST00000365547 113 ntBASIC1.27□□□□□ -2.21
GTF3C4Q9UKN8 SNORA25-201ENST00000384384 134 ntBASIC1.27□□□□□ -2.21
GTF3C4Q9UKN8 RNU6-713P-201ENST00000384761 107 ntBASIC1.27□□□□□ -2.21
GTF3C4Q9UKN8 snosnR66.1-201ENST00000391095 99 ntBASIC1.27□□□□□ -2.21
GTF3C4Q9UKN8 Z98949.2-201ENST00000440996 144 ntBASIC1.27□□□□□ -2.21
GTF3C4Q9UKN8 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC1.27□□□□□ -2.21
GTF3C4Q9UKN8 SUMO1P2-201ENST00000452524 304 ntBASIC1.27□□□□□ -2.21
GTF3C4Q9UKN8 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.27□□□□□ -2.21
GTF3C4Q9UKN8 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC1.27□□□□□ -2.21
GTF3C4Q9UKN8 AP002004.2-201ENST00000531656 154 ntBASIC1.27□□□□□ -2.21
GTF3C4Q9UKN8 AC024405.2-202ENST00000532731 184 ntBASIC1.27□□□□□ -2.21
GTF3C4Q9UKN8 MIR8070-201ENST00000616510 88 ntBASIC1.27□□□□□ -2.21
GTF3C4Q9UKN8 snoU18.1-201ENST00000629629 71 ntBASIC1.27□□□□□ -2.21
GTF3C4Q9UKN8 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC1.26□□□□□ -2.21
GTF3C4Q9UKN8 RNU4-41P-201ENST00000364426 143 ntBASIC1.26□□□□□ -2.21
GTF3C4Q9UKN8 SNORA72.4-201ENST00000384174 132 ntBASIC1.26□□□□□ -2.21
GTF3C4Q9UKN8 RNU6-424P-201ENST00000384367 105 ntBASIC1.26□□□□□ -2.21
GTF3C4Q9UKN8 AL603910.2-201ENST00000407268 136 ntBASIC1.26□□□□□ -2.21
GTF3C4Q9UKN8 AL390729.2-201ENST00000416137 156 ntBASIC1.26□□□□□ -2.21
GTF3C4Q9UKN8 BTF3P11-201ENST00000426582 477 ntBASIC1.26□□□□□ -2.21
GTF3C4Q9UKN8 CALM2P4-201ENST00000430810 426 ntBASIC1.26□□□□□ -2.21
GTF3C4Q9UKN8 SNORD127-201ENST00000458892 86 ntBASIC1.26□□□□□ -2.21
GTF3C4Q9UKN8 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC1.26□□□□□ -2.21
GTF3C4Q9UKN8 RN7SKP179-201ENST00000516126 217 ntBASIC1.26□□□□□ -2.21
GTF3C4Q9UKN8 Y_RNA.668-201ENST00000516233 93 ntBASIC1.26□□□□□ -2.21
GTF3C4Q9UKN8 AC011604.1-201ENST00000545978 196 ntBASIC1.26□□□□□ -2.21
GTF3C4Q9UKN8 BX284668.6-201ENST00000606899 438 ntBASIC1.26□□□□□ -2.21
GTF3C4Q9UKN8 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.26□□□□□ -2.21
GTF3C4Q9UKN8 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
GTF3C4Q9UKN8 Y_RNA.76-201ENST00000362931 109 ntBASIC1.25□□□□□ -2.21
GTF3C4Q9UKN8 Y_RNA.144-201ENST00000363521 113 ntBASIC1.25□□□□□ -2.21
GTF3C4Q9UKN8 Y_RNA.217-201ENST00000364214 105 ntBASIC1.25□□□□□ -2.21
GTF3C4Q9UKN8 Y_RNA.277-201ENST00000364754 102 ntBASIC1.25□□□□□ -2.21
GTF3C4Q9UKN8 U8.16-201ENST00000391279 133 ntBASIC1.25□□□□□ -2.21
GTF3C4Q9UKN8 MIR1302-6-201ENST00000408466 90 ntBASIC1.25□□□□□ -2.21
GTF3C4Q9UKN8 RNU6-383P-201ENST00000410864 94 ntBASIC1.25□□□□□ -2.21
GTF3C4Q9UKN8 AC093850.1-201ENST00000454121 251 ntBASIC1.25□□□□□ -2.21
GTF3C4Q9UKN8 Y_RNA.641-201ENST00000459414 105 ntBASIC1.25□□□□□ -2.21
GTF3C4Q9UKN8 OR9P1P-201ENST00000496431 281 ntBASIC1.25□□□□□ -2.21
GTF3C4Q9UKN8 RNU6-322P-201ENST00000516010 103 ntBASIC1.25□□□□□ -2.21
GTF3C4Q9UKN8 Y_RNA.673-201ENST00000516306 88 ntBASIC1.25□□□□□ -2.21
GTF3C4Q9UKN8 RNA5SP404-201ENST00000517118 132 ntBASIC1.25□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 230 ms