Protein–RNA interactions for Protein: Q9UHP3

USP25, Ubiquitin carboxyl-terminal hydrolase 25, humanhuman

Predictions only

Length 1,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP25Q9UHP3 snoU13.15-201ENST00000459407 104 ntBASIC2.31□□□□□ -2.04
USP25Q9UHP3 RPS26P45-201ENST00000471748 340 ntBASIC2.31□□□□□ -2.04
USP25Q9UHP3 RN7SL274P-201ENST00000492268 272 ntBASIC2.31□□□□□ -2.04
USP25Q9UHP3 RNU6-346P-201ENST00000516288 111 ntBASIC2.31□□□□□ -2.04
USP25Q9UHP3 IGKV3-31-201ENST00000523109 329 ntBASIC2.31□□□□□ -2.04
USP25Q9UHP3 AC011604.1-201ENST00000545978 196 ntBASIC2.31□□□□□ -2.04
USP25Q9UHP3 MIR2681-201ENST00000581814 105 ntBASIC2.31□□□□□ -2.04
USP25Q9UHP3 AC073413.2-201ENST00000604332 360 ntBASIC2.31□□□□□ -2.04
USP25Q9UHP3 MIR6873-201ENST00000622788 63 ntBASIC2.31□□□□□ -2.04
USP25Q9UHP3 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.31□□□□□ -2.04
USP25Q9UHP3 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.31□□□□□ -2.04
USP25Q9UHP3 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.31□□□□□ -2.04
USP25Q9UHP3 AL157777.2-201ENST00000258070 137 ntBASIC2.3□□□□□ -2.04
USP25Q9UHP3 RNU4-41P-201ENST00000364426 143 ntBASIC2.3□□□□□ -2.04
USP25Q9UHP3 SNORD113-1-201ENST00000365321 69 ntBASIC2.3□□□□□ -2.04
USP25Q9UHP3 RNU6-643P-201ENST00000384018 107 ntBASIC2.3□□□□□ -2.04
USP25Q9UHP3 RNU6-136P-201ENST00000384663 107 ntBASIC2.3□□□□□ -2.04
USP25Q9UHP3 AC069257.2-201ENST00000441819 155 ntBASIC2.3□□□□□ -2.04
USP25Q9UHP3 AL121914.1-201ENST00000450188 156 ntBASIC2.3□□□□□ -2.04
USP25Q9UHP3 MRPS17P9-201ENST00000511924 393 ntBASIC2.3□□□□□ -2.04
USP25Q9UHP3 RNU6-1096P-201ENST00000517089 102 ntBASIC2.3□□□□□ -2.04
USP25Q9UHP3 AC024995.1-201ENST00000523014 93 ntBASIC2.3□□□□□ -2.04
USP25Q9UHP3 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
USP25Q9UHP3 AC084364.2-201ENST00000546924 395 ntBASIC2.3□□□□□ -2.04
USP25Q9UHP3 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC2.3□□□□□ -2.04
USP25Q9UHP3 MIR4524B-201ENST00000581569 115 ntBASIC2.3□□□□□ -2.04
USP25Q9UHP3 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.3□□□□□ -2.04
USP25Q9UHP3 Y_RNA.778-201ENST00000620203 90 ntBASIC2.3□□□□□ -2.04
USP25Q9UHP3 ZNF355P-201ENST00000427301 3216 ntBASIC2.29□□□□□ -2.04
USP25Q9UHP3 RNU6-112P-201ENST00000363599 104 ntBASIC2.29□□□□□ -2.04
USP25Q9UHP3 MIR520A-201ENST00000384862 85 ntBASIC2.29□□□□□ -2.04
USP25Q9UHP3 RNA5SP323-201ENST00000391094 133 ntBASIC2.29□□□□□ -2.04
USP25Q9UHP3 RNA5SP467-201ENST00000391274 118 ntBASIC2.29□□□□□ -2.04
USP25Q9UHP3 RNU6-1186P-201ENST00000410429 97 ntBASIC2.29□□□□□ -2.04
USP25Q9UHP3 RNU2-55P-201ENST00000411146 174 ntBASIC2.29□□□□□ -2.04
USP25Q9UHP3 RNU6-561P-201ENST00000516222 102 ntBASIC2.29□□□□□ -2.04
USP25Q9UHP3 MIR1273D-201ENST00000577266 86 ntBASIC2.29□□□□□ -2.04
USP25Q9UHP3 MIR4648-201ENST00000580107 72 ntBASIC2.29□□□□□ -2.04
USP25Q9UHP3 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.29□□□□□ -2.04
USP25Q9UHP3 AC132825.6-201ENST00000638861 357 ntBASIC2.29□□□□□ -2.04
USP25Q9UHP3 AC018630.2-201ENST00000534866 2403 ntBASIC2.28□□□□□ -2.04
USP25Q9UHP3 Y_RNA.337-201ENST00000365312 102 ntBASIC2.28□□□□□ -2.04
USP25Q9UHP3 SNORD11-201ENST00000459124 84 ntBASIC2.28□□□□□ -2.04
USP25Q9UHP3 RNU1-142P-201ENST00000516682 145 ntBASIC2.28□□□□□ -2.04
USP25Q9UHP3 AL358944.1-201ENST00000528537 144 ntBASIC2.28□□□□□ -2.04
USP25Q9UHP3 AL160236.1-201ENST00000556317 195 ntBASIC2.28□□□□□ -2.04
USP25Q9UHP3 AC022254.1-201ENST00000567857 235 ntBASIC2.28□□□□□ -2.04
USP25Q9UHP3 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.28□□□□□ -2.04
USP25Q9UHP3 MIR4713-201ENST00000582691 75 ntBASIC2.28□□□□□ -2.04
USP25Q9UHP3 DNAJC19P2-201ENST00000593340 302 ntBASIC2.28□□□□□ -2.04
USP25Q9UHP3 MIR219B-201ENST00000637023 88 ntBASIC2.28□□□□□ -2.04
USP25Q9UHP3 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
USP25Q9UHP3 SNORA33-201ENST00000363664 130 ntBASIC2.27□□□□□ -2.05
USP25Q9UHP3 SNORD45.3-201ENST00000363836 72 ntBASIC2.27□□□□□ -2.05
USP25Q9UHP3 Y_RNA.796-201ENST00000364268 102 ntBASIC2.27□□□□□ -2.05
USP25Q9UHP3 Y_RNA.799-201ENST00000364992 102 ntBASIC2.27□□□□□ -2.05
USP25Q9UHP3 MIR562-201ENST00000384894 95 ntBASIC2.27□□□□□ -2.05
USP25Q9UHP3 RN7SKP223-201ENST00000410582 62 ntBASIC2.27□□□□□ -2.05
USP25Q9UHP3 RNA5SP489-201ENST00000410986 109 ntBASIC2.27□□□□□ -2.05
USP25Q9UHP3 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.27□□□□□ -2.05
USP25Q9UHP3 AC245047.4-201ENST00000433189 144 ntBASIC2.27□□□□□ -2.05
USP25Q9UHP3 SNORD116-25-201ENST00000516517 92 ntBASIC2.27□□□□□ -2.05
USP25Q9UHP3 RNU6-341P-201ENST00000516973 96 ntBASIC2.27□□□□□ -2.05
USP25Q9UHP3 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.27□□□□□ -2.05
USP25Q9UHP3 MIR6079-201ENST00000635807 62 ntBASIC2.27□□□□□ -2.05
USP25Q9UHP3 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC2.26□□□□□ -2.05
USP25Q9UHP3 Y_RNA.215-201ENST00000364204 112 ntBASIC2.26□□□□□ -2.05
USP25Q9UHP3 RNU6-484P-201ENST00000384016 107 ntBASIC2.26□□□□□ -2.05
USP25Q9UHP3 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
USP25Q9UHP3 MIR676-201ENST00000390702 67 ntBASIC2.26□□□□□ -2.05
USP25Q9UHP3 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.26□□□□□ -2.05
USP25Q9UHP3 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC2.26□□□□□ -2.05
USP25Q9UHP3 RNU7-94P-201ENST00000459576 63 ntBASIC2.26□□□□□ -2.05
USP25Q9UHP3 SNORD77.4-201ENST00000516158 81 ntBASIC2.26□□□□□ -2.05
USP25Q9UHP3 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC2.26□□□□□ -2.05
USP25Q9UHP3 MIR4769-201ENST00000584126 77 ntBASIC2.26□□□□□ -2.05
USP25Q9UHP3 AP001485.1-201ENST00000604799 199 ntBASIC2.26□□□□□ -2.05
USP25Q9UHP3 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC2.26□□□□□ -2.05
USP25Q9UHP3 U2.22-201ENST00000636441 106 ntBASIC2.26□□□□□ -2.05
USP25Q9UHP3 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.26□□□□□ -2.05
USP25Q9UHP3 RNU6-1209P-201ENST00000363655 107 ntBASIC2.25□□□□□ -2.05
USP25Q9UHP3 RNU6-151P-201ENST00000364158 107 ntBASIC2.25□□□□□ -2.05
USP25Q9UHP3 Y_RNA.488-201ENST00000384403 102 ntBASIC2.25□□□□□ -2.05
USP25Q9UHP3 RNU6-296P-201ENST00000384608 107 ntBASIC2.25□□□□□ -2.05
USP25Q9UHP3 Y_RNA.587-201ENST00000391210 103 ntBASIC2.25□□□□□ -2.05
USP25Q9UHP3 RNU2-7P-201ENST00000410794 178 ntBASIC2.25□□□□□ -2.05
USP25Q9UHP3 AC006461.1-201ENST00000412637 326 ntBASIC2.25□□□□□ -2.05
USP25Q9UHP3 SNRPGP8-201ENST00000454064 226 ntBASIC2.25□□□□□ -2.05
USP25Q9UHP3 SNORA31.17-201ENST00000516953 127 ntBASIC2.25□□□□□ -2.05
USP25Q9UHP3 RPL23AP91-201ENST00000569211 455 ntBASIC2.25□□□□□ -2.05
USP25Q9UHP3 uc_338.4-201ENST00000616635 176 ntBASIC2.25□□□□□ -2.05
USP25Q9UHP3 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
USP25Q9UHP3 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
USP25Q9UHP3 Y_RNA.343-201ENST00000365354 112 ntBASIC2.24□□□□□ -2.05
USP25Q9UHP3 RNU6-81P-201ENST00000365608 104 ntBASIC2.24□□□□□ -2.05
USP25Q9UHP3 SNORA19-201ENST00000384737 128 ntBASIC2.24□□□□□ -2.05
USP25Q9UHP3 Y_RNA.568-201ENST00000384742 113 ntBASIC2.24□□□□□ -2.05
USP25Q9UHP3 MIR569-201ENST00000385228 96 ntBASIC2.24□□□□□ -2.05
USP25Q9UHP3 HMGN2P19-201ENST00000425149 265 ntBASIC2.24□□□□□ -2.05
USP25Q9UHP3 RNU6-197P-201ENST00000516680 100 ntBASIC2.24□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 183.5 ms