Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
CLIP2Q9UDT6 RNU6-653P-201ENST00000363074 106 ntBASIC1.5□□□□□ -2.17
CLIP2Q9UDT6 Y_RNA.124-201ENST00000363339 93 ntBASIC1.5□□□□□ -2.17
CLIP2Q9UDT6 Y_RNA.170-201ENST00000363746 110 ntBASIC1.5□□□□□ -2.17
CLIP2Q9UDT6 RNU6-801P-201ENST00000364087 105 ntBASIC1.5□□□□□ -2.17
CLIP2Q9UDT6 SNORD115-30-201ENST00000364117 82 ntBASIC1.5□□□□□ -2.17
CLIP2Q9UDT6 RNU6-53P-201ENST00000365367 106 ntBASIC1.5□□□□□ -2.17
CLIP2Q9UDT6 RNU6-804P-201ENST00000384286 107 ntBASIC1.5□□□□□ -2.17
CLIP2Q9UDT6 Y_RNA.506-201ENST00000384494 102 ntBASIC1.5□□□□□ -2.17
CLIP2Q9UDT6 RNU6-763P-201ENST00000390865 106 ntBASIC1.5□□□□□ -2.17
CLIP2Q9UDT6 SNORA26.5-201ENST00000391215 123 ntBASIC1.5□□□□□ -2.17
CLIP2Q9UDT6 RNU2-54P-201ENST00000410299 190 ntBASIC1.5□□□□□ -2.17
CLIP2Q9UDT6 RNU5E-9P-201ENST00000411164 104 ntBASIC1.5□□□□□ -2.17
CLIP2Q9UDT6 AC024067.1-201ENST00000426199 223 ntBASIC1.5□□□□□ -2.17
CLIP2Q9UDT6 NDUFB4P10-201ENST00000452541 359 ntBASIC1.5□□□□□ -2.17
CLIP2Q9UDT6 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC1.5□□□□□ -2.17
CLIP2Q9UDT6 RNA5SP445-201ENST00000515889 115 ntBASIC1.5□□□□□ -2.17
CLIP2Q9UDT6 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC1.5□□□□□ -2.17
CLIP2Q9UDT6 AC104465.1-201ENST00000611365 139 ntBASIC1.5□□□□□ -2.17
CLIP2Q9UDT6 AC008873.1-201ENST00000625051 138 ntBASIC1.5□□□□□ -2.17
CLIP2Q9UDT6 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC1.5□□□□□ -2.17
CLIP2Q9UDT6 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.5□□□□□ -2.17
CLIP2Q9UDT6 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC1.5□□□□□ -2.17
CLIP2Q9UDT6 SNORA72.2-201ENST00000365028 127 ntBASIC1.49□□□□□ -2.17
CLIP2Q9UDT6 RNU6-245P-201ENST00000384020 107 ntBASIC1.49□□□□□ -2.17
CLIP2Q9UDT6 MIR548M-201ENST00000408260 86 ntBASIC1.49□□□□□ -2.17
CLIP2Q9UDT6 BTF3P11-201ENST00000426582 477 ntBASIC1.49□□□□□ -2.17
CLIP2Q9UDT6 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.49□□□□□ -2.17
CLIP2Q9UDT6 AL138752.1-201ENST00000452964 351 ntBASIC1.49□□□□□ -2.17
CLIP2Q9UDT6 HMGN1P7-201ENST00000491722 313 ntBASIC1.49□□□□□ -2.17
CLIP2Q9UDT6 AC074133.1-201ENST00000515696 183 ntBASIC1.49□□□□□ -2.17
CLIP2Q9UDT6 Y_RNA.679-201ENST00000516416 91 ntBASIC1.49□□□□□ -2.17
CLIP2Q9UDT6 Y_RNA.700-201ENST00000516806 100 ntBASIC1.49□□□□□ -2.17
CLIP2Q9UDT6 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC1.49□□□□□ -2.17
CLIP2Q9UDT6 MIR8070-201ENST00000616510 88 ntBASIC1.49□□□□□ -2.17
CLIP2Q9UDT6 AL365265.1-201ENST00000621045 234 ntBASIC1.49□□□□□ -2.17
CLIP2Q9UDT6 AC091895.1-201ENST00000624494 256 ntBASIC1.49□□□□□ -2.17
CLIP2Q9UDT6 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
CLIP2Q9UDT6 MIR26B-201ENST00000362251 77 ntBASIC1.48□□□□□ -2.17
CLIP2Q9UDT6 MIR302D-201ENST00000362275 68 ntBASIC1.48□□□□□ -2.17
CLIP2Q9UDT6 Y_RNA.8-201ENST00000362353 102 ntBASIC1.48□□□□□ -2.17
CLIP2Q9UDT6 RNU6-1272P-201ENST00000362776 107 ntBASIC1.48□□□□□ -2.17
CLIP2Q9UDT6 SNORD26-201ENST00000384147 75 ntBASIC1.48□□□□□ -2.17
CLIP2Q9UDT6 SNORA19-201ENST00000384737 128 ntBASIC1.48□□□□□ -2.17
CLIP2Q9UDT6 MIR515-2-201ENST00000384883 83 ntBASIC1.48□□□□□ -2.17
CLIP2Q9UDT6 MIR515-1-201ENST00000384884 83 ntBASIC1.48□□□□□ -2.17
CLIP2Q9UDT6 RNU2-7P-201ENST00000410794 178 ntBASIC1.48□□□□□ -2.17
CLIP2Q9UDT6 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.48□□□□□ -2.17
CLIP2Q9UDT6 AC015922.2-201ENST00000435593 184 ntBASIC1.48□□□□□ -2.17
CLIP2Q9UDT6 AC016717.1-201ENST00000448918 286 ntBASIC1.48□□□□□ -2.17
CLIP2Q9UDT6 RPS29P29-201ENST00000456396 171 ntBASIC1.48□□□□□ -2.17
CLIP2Q9UDT6 RNU6-1198P-201ENST00000516904 67 ntBASIC1.48□□□□□ -2.17
CLIP2Q9UDT6 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
CLIP2Q9UDT6 MIR6078-201ENST00000611069 100 ntBASIC1.48□□□□□ -2.17
CLIP2Q9UDT6 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC1.48□□□□□ -2.17
CLIP2Q9UDT6 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.48□□□□□ -2.17
CLIP2Q9UDT6 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
CLIP2Q9UDT6 snoU2-30.2-201ENST00000362805 70 ntBASIC1.47□□□□□ -2.17
CLIP2Q9UDT6 RNU6-1020P-201ENST00000363684 107 ntBASIC1.47□□□□□ -2.17
CLIP2Q9UDT6 RNU6-324P-201ENST00000363957 106 ntBASIC1.47□□□□□ -2.17
CLIP2Q9UDT6 RNU6-1130P-201ENST00000365434 107 ntBASIC1.47□□□□□ -2.17
CLIP2Q9UDT6 RNU6-1264P-201ENST00000383891 107 ntBASIC1.47□□□□□ -2.17
CLIP2Q9UDT6 Y_RNA.398-201ENST00000383952 99 ntBASIC1.47□□□□□ -2.17
CLIP2Q9UDT6 RNU6-514P-201ENST00000384208 107 ntBASIC1.47□□□□□ -2.17
CLIP2Q9UDT6 AL031003.1-201ENST00000404229 172 ntBASIC1.47□□□□□ -2.17
CLIP2Q9UDT6 RNU6ATAC19P-201ENST00000408096 110 ntBASIC1.47□□□□□ -2.17
CLIP2Q9UDT6 RNU6-1135P-201ENST00000411083 103 ntBASIC1.47□□□□□ -2.17
CLIP2Q9UDT6 AL161935.2-201ENST00000414627 60 ntBASIC1.47□□□□□ -2.17
CLIP2Q9UDT6 AC104332.1-201ENST00000440471 797 ntBASIC1.47□□□□□ -2.17
CLIP2Q9UDT6 RNU6-1146P-201ENST00000516282 102 ntBASIC1.47□□□□□ -2.17
CLIP2Q9UDT6 MRPS18CP4-201ENST00000535821 231 ntBASIC1.47□□□□□ -2.17
CLIP2Q9UDT6 SNORD11B-201ENST00000607707 90 ntBASIC1.47□□□□□ -2.17
CLIP2Q9UDT6 U6.115-201ENST00000636045 103 ntBASIC1.47□□□□□ -2.17
CLIP2Q9UDT6 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.46□□□□□ -2.18
CLIP2Q9UDT6 RNU6-271P-201ENST00000363858 105 ntBASIC1.46□□□□□ -2.18
CLIP2Q9UDT6 snoU2_19.4-201ENST00000364329 80 ntBASIC1.46□□□□□ -2.18
CLIP2Q9UDT6 Y_RNA.226-201ENST00000364337 114 ntBASIC1.46□□□□□ -2.18
CLIP2Q9UDT6 RNU6-1305P-201ENST00000364353 104 ntBASIC1.46□□□□□ -2.18
CLIP2Q9UDT6 Y_RNA.233-201ENST00000364407 101 ntBASIC1.46□□□□□ -2.18
CLIP2Q9UDT6 Y_RNA.304-201ENST00000365011 112 ntBASIC1.46□□□□□ -2.18
CLIP2Q9UDT6 RNU6-939P-201ENST00000384634 107 ntBASIC1.46□□□□□ -2.18
CLIP2Q9UDT6 MTCO2P33-201ENST00000402100 465 ntBASIC1.46□□□□□ -2.18
CLIP2Q9UDT6 AL355796.1-201ENST00000406706 323 ntBASIC1.46□□□□□ -2.18
CLIP2Q9UDT6 RNA5SP475-201ENST00000410568 110 ntBASIC1.46□□□□□ -2.18
CLIP2Q9UDT6 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.46□□□□□ -2.18
CLIP2Q9UDT6 HMGN2P34-201ENST00000437647 269 ntBASIC1.46□□□□□ -2.18
CLIP2Q9UDT6 RNA5SP272-201ENST00000516095 111 ntBASIC1.46□□□□□ -2.18
CLIP2Q9UDT6 RNU6-406P-201ENST00000516470 107 ntBASIC1.46□□□□□ -2.18
CLIP2Q9UDT6 RNU6-1212P-201ENST00000517023 104 ntBASIC1.46□□□□□ -2.18
CLIP2Q9UDT6 RNU6-902P-201ENST00000517212 91 ntBASIC1.46□□□□□ -2.18
CLIP2Q9UDT6 AC027419.1-201ENST00000522976 328 ntBASIC1.46□□□□□ -2.18
CLIP2Q9UDT6 AL137100.2-201ENST00000555786 315 ntBASIC1.46□□□□□ -2.18
CLIP2Q9UDT6 AC073413.2-201ENST00000604332 360 ntBASIC1.46□□□□□ -2.18
CLIP2Q9UDT6 RNU2-4P-201ENST00000606190 192 ntBASIC1.46□□□□□ -2.18
CLIP2Q9UDT6 AC073349.3-201ENST00000617616 186 ntBASIC1.46□□□□□ -2.18
CLIP2Q9UDT6 SNORD33-201ENST00000362761 85 ntBASIC1.45□□□□□ -2.18
CLIP2Q9UDT6 SNORD116-13-201ENST00000384408 92 ntBASIC1.45□□□□□ -2.18
CLIP2Q9UDT6 RNU7-57P-201ENST00000459540 60 ntBASIC1.45□□□□□ -2.18
CLIP2Q9UDT6 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC1.45□□□□□ -2.18
CLIP2Q9UDT6 SCARNA8-201ENST00000515924 131 ntBASIC1.45□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 189.1 ms