Protein–RNA interactions for Protein: Q9NPG4

PCDH12, Protocadherin-12, humanhuman

Predictions only

Length 1,184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH12Q9NPG4 MIR4503-201ENST00000582187 83 ntBASIC1.99□□□□□ -2.09
PCDH12Q9NPG4 MIR3149-201ENST00000584629 83 ntBASIC1.99□□□□□ -2.09
PCDH12Q9NPG4 SNRPGP19-201ENST00000603826 189 ntBASIC1.99□□□□□ -2.09
PCDH12Q9NPG4 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
PCDH12Q9NPG4 ZNF355P-201ENST00000427301 3216 ntBASIC1.98□□□□□ -2.09
PCDH12Q9NPG4 RNU6-457P-201ENST00000363999 107 ntBASIC1.98□□□□□ -2.09
PCDH12Q9NPG4 Y_RNA.350-201ENST00000365409 98 ntBASIC1.98□□□□□ -2.09
PCDH12Q9NPG4 RNU6-442P-201ENST00000383968 104 ntBASIC1.98□□□□□ -2.09
PCDH12Q9NPG4 Y_RNA.416-201ENST00000384014 113 ntBASIC1.98□□□□□ -2.09
PCDH12Q9NPG4 MIR15B-201ENST00000385045 98 ntBASIC1.98□□□□□ -2.09
PCDH12Q9NPG4 snosnR66.1-201ENST00000391095 99 ntBASIC1.98□□□□□ -2.09
PCDH12Q9NPG4 AC025033.1-201ENST00000463883 194 ntBASIC1.98□□□□□ -2.09
PCDH12Q9NPG4 AC004817.2-201ENST00000561794 651 ntBASIC1.98□□□□□ -2.09
PCDH12Q9NPG4 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
PCDH12Q9NPG4 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
PCDH12Q9NPG4 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
PCDH12Q9NPG4 SNORD50B-201ENST00000364995 70 ntBASIC1.97□□□□□ -2.09
PCDH12Q9NPG4 MIR653-201ENST00000385279 96 ntBASIC1.97□□□□□ -2.09
PCDH12Q9NPG4 RNU6-383P-201ENST00000410864 94 ntBASIC1.97□□□□□ -2.09
PCDH12Q9NPG4 AC092991.1-201ENST00000477176 376 ntBASIC1.97□□□□□ -2.09
PCDH12Q9NPG4 MIR4282-201ENST00000583613 67 ntBASIC1.97□□□□□ -2.09
PCDH12Q9NPG4 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
PCDH12Q9NPG4 Y_RNA.122-201ENST00000363331 96 ntBASIC1.96□□□□□ -2.1
PCDH12Q9NPG4 Y_RNA.277-201ENST00000364754 102 ntBASIC1.96□□□□□ -2.1
PCDH12Q9NPG4 SNORD38C-201ENST00000384381 69 ntBASIC1.96□□□□□ -2.1
PCDH12Q9NPG4 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.96□□□□□ -2.1
PCDH12Q9NPG4 MIR1278-201ENST00000408753 81 ntBASIC1.96□□□□□ -2.1
PCDH12Q9NPG4 SNORD11-201ENST00000459124 84 ntBASIC1.96□□□□□ -2.1
PCDH12Q9NPG4 Y_RNA.638-201ENST00000459374 113 ntBASIC1.96□□□□□ -2.1
PCDH12Q9NPG4 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
PCDH12Q9NPG4 AL357312.1-201ENST00000603879 298 ntBASIC1.96□□□□□ -2.1
PCDH12Q9NPG4 MIR136-201ENST00000385207 82 ntBASIC1.95□□□□□ -2.1
PCDH12Q9NPG4 AC019129.1-201ENST00000403786 261 ntBASIC1.95□□□□□ -2.1
PCDH12Q9NPG4 MIR1298-201ENST00000408783 112 ntBASIC1.95□□□□□ -2.1
PCDH12Q9NPG4 RN7SKP101-201ENST00000411376 320 ntBASIC1.95□□□□□ -2.1
PCDH12Q9NPG4 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC1.95□□□□□ -2.1
PCDH12Q9NPG4 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.95□□□□□ -2.1
PCDH12Q9NPG4 RNU6-126P-201ENST00000516685 103 ntBASIC1.95□□□□□ -2.1
PCDH12Q9NPG4 MIR3935-201ENST00000583472 104 ntBASIC1.95□□□□□ -2.1
PCDH12Q9NPG4 GHRLOS.1-201ENST00000610995 70 ntBASIC1.95□□□□□ -2.1
PCDH12Q9NPG4 MIR7843-201ENST00000622274 79 ntBASIC1.95□□□□□ -2.1
PCDH12Q9NPG4 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
PCDH12Q9NPG4 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC1.94□□□□□ -2.1
PCDH12Q9NPG4 NDUFA4P2-201ENST00000489989 244 ntBASIC1.94□□□□□ -2.1
PCDH12Q9NPG4 RN7SL274P-201ENST00000492268 272 ntBASIC1.94□□□□□ -2.1
PCDH12Q9NPG4 AC024614.2-201ENST00000577584 372 ntBASIC1.94□□□□□ -2.1
PCDH12Q9NPG4 AC008507.4-201ENST00000585464 127 ntBASIC1.94□□□□□ -2.1
PCDH12Q9NPG4 FAM106DP-201ENST00000586416 501 ntBASIC1.94□□□□□ -2.1
PCDH12Q9NPG4 uc_338.4-201ENST00000616635 176 ntBASIC1.94□□□□□ -2.1
PCDH12Q9NPG4 Y_RNA.304-201ENST00000365011 112 ntBASIC1.93□□□□□ -2.1
PCDH12Q9NPG4 MIR626-201ENST00000385032 94 ntBASIC1.93□□□□□ -2.1
PCDH12Q9NPG4 U8.13-201ENST00000390842 128 ntBASIC1.93□□□□□ -2.1
PCDH12Q9NPG4 RNU6-922P-201ENST00000516753 99 ntBASIC1.93□□□□□ -2.1
PCDH12Q9NPG4 AC110588.1-201ENST00000559699 137 ntBASIC1.93□□□□□ -2.1
PCDH12Q9NPG4 MIR4662B-201ENST00000579498 81 ntBASIC1.93□□□□□ -2.1
PCDH12Q9NPG4 AP001485.1-201ENST00000604799 199 ntBASIC1.93□□□□□ -2.1
PCDH12Q9NPG4 AL442067.1-201ENST00000613261 223 ntBASIC1.93□□□□□ -2.1
PCDH12Q9NPG4 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.93□□□□□ -2.1
PCDH12Q9NPG4 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.93□□□□□ -2.1
PCDH12Q9NPG4 Y_RNA.262-201ENST00000364641 102 ntBASIC1.92□□□□□ -2.1
PCDH12Q9NPG4 AL445685.2-201ENST00000422551 342 ntBASIC1.92□□□□□ -2.1
PCDH12Q9NPG4 RPS27P16-201ENST00000425758 201 ntBASIC1.92□□□□□ -2.1
PCDH12Q9NPG4 AC015922.2-201ENST00000435593 184 ntBASIC1.92□□□□□ -2.1
PCDH12Q9NPG4 RNU6-917P-201ENST00000516294 104 ntBASIC1.92□□□□□ -2.1
PCDH12Q9NPG4 RNU6-250P-201ENST00000516958 103 ntBASIC1.92□□□□□ -2.1
PCDH12Q9NPG4 AL512310.8-201ENST00000550183 120 ntBASIC1.92□□□□□ -2.1
PCDH12Q9NPG4 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC1.92□□□□□ -2.1
PCDH12Q9NPG4 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.92□□□□□ -2.1
PCDH12Q9NPG4 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
PCDH12Q9NPG4 Y_RNA.20-201ENST00000362479 113 ntBASIC1.91□□□□□ -2.1
PCDH12Q9NPG4 Y_RNA.24-201ENST00000362508 103 ntBASIC1.91□□□□□ -2.1
PCDH12Q9NPG4 SNORD27-201ENST00000363981 72 ntBASIC1.91□□□□□ -2.1
PCDH12Q9NPG4 MIR583-201ENST00000384846 75 ntBASIC1.91□□□□□ -2.1
PCDH12Q9NPG4 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.91□□□□□ -2.1
PCDH12Q9NPG4 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC1.91□□□□□ -2.1
PCDH12Q9NPG4 AC100767.1-201ENST00000528178 123 ntBASIC1.91□□□□□ -2.1
PCDH12Q9NPG4 MIR3664-201ENST00000579074 99 ntBASIC1.91□□□□□ -2.1
PCDH12Q9NPG4 AL049861.1-201ENST00000603130 150 ntBASIC1.91□□□□□ -2.1
PCDH12Q9NPG4 AC012493.3-201ENST00000604494 112 ntBASIC1.91□□□□□ -2.1
PCDH12Q9NPG4 AL021707.8-201ENST00000609428 183 ntBASIC1.91□□□□□ -2.1
PCDH12Q9NPG4 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.91□□□□□ -2.1
PCDH12Q9NPG4 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.91□□□□□ -2.1
PCDH12Q9NPG4 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
PCDH12Q9NPG4 SNORA20.1-201ENST00000364790 130 ntBASIC1.9□□□□□ -2.11
PCDH12Q9NPG4 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
PCDH12Q9NPG4 RNU6-651P-201ENST00000411040 105 ntBASIC1.9□□□□□ -2.11
PCDH12Q9NPG4 AC003989.2-201ENST00000440224 169 ntBASIC1.9□□□□□ -2.11
PCDH12Q9NPG4 RPL39P39-201ENST00000455840 151 ntBASIC1.9□□□□□ -2.11
PCDH12Q9NPG4 RNA5SP182-201ENST00000516064 82 ntBASIC1.9□□□□□ -2.11
PCDH12Q9NPG4 RNU6-970P-201ENST00000516312 107 ntBASIC1.9□□□□□ -2.11
PCDH12Q9NPG4 RNU6-295P-201ENST00000516901 104 ntBASIC1.9□□□□□ -2.11
PCDH12Q9NPG4 MIR4524B-201ENST00000581569 115 ntBASIC1.9□□□□□ -2.11
PCDH12Q9NPG4 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC1.9□□□□□ -2.11
PCDH12Q9NPG4 AL365265.1-201ENST00000621045 234 ntBASIC1.9□□□□□ -2.11
PCDH12Q9NPG4 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.9□□□□□ -2.11
PCDH12Q9NPG4 Y_RNA.292-201ENST00000364904 97 ntBASIC1.89□□□□□ -2.11
PCDH12Q9NPG4 Y_RNA.477-201ENST00000384352 108 ntBASIC1.89□□□□□ -2.11
PCDH12Q9NPG4 MIR526A1-201ENST00000384897 85 ntBASIC1.89□□□□□ -2.11
PCDH12Q9NPG4 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
PCDH12Q9NPG4 SNORA40.18-201ENST00000391200 128 ntBASIC1.89□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 171 ms