Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 RPS29P23-201ENST00000458635 123 ntBASIC1.46□□□□□ -2.18
BRF2Q9HAW0 snoU13.26-201ENST00000459452 105 ntBASIC1.46□□□□□ -2.18
BRF2Q9HAW0 MTCO2P24-201ENST00000515611 426 ntBASIC1.46□□□□□ -2.18
BRF2Q9HAW0 Y_RNA.679-201ENST00000516416 91 ntBASIC1.46□□□□□ -2.18
BRF2Q9HAW0 RN7SKP88-201ENST00000516847 250 ntBASIC1.46□□□□□ -2.18
BRF2Q9HAW0 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.46□□□□□ -2.18
BRF2Q9HAW0 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC1.46□□□□□ -2.18
BRF2Q9HAW0 CYP3A52P-201ENST00000563326 91 ntBASIC1.46□□□□□ -2.18
BRF2Q9HAW0 MIR4724-201ENST00000579485 89 ntBASIC1.46□□□□□ -2.18
BRF2Q9HAW0 FAM106DP-201ENST00000586416 501 ntBASIC1.46□□□□□ -2.18
BRF2Q9HAW0 AC087685.1-201ENST00000587507 141 ntBASIC1.46□□□□□ -2.18
BRF2Q9HAW0 7SK.8-201ENST00000612110 250 ntBASIC1.46□□□□□ -2.18
BRF2Q9HAW0 7SK.11-201ENST00000615477 250 ntBASIC1.46□□□□□ -2.18
BRF2Q9HAW0 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC1.46□□□□□ -2.18
BRF2Q9HAW0 7SK.13-201ENST00000622040 250 ntBASIC1.46□□□□□ -2.18
BRF2Q9HAW0 AL161722.3-201ENST00000605789 2983 ntBASIC1.45□□□□□ -2.18
BRF2Q9HAW0 UBE2WP1-201ENST00000362030 340 ntBASIC1.45□□□□□ -2.18
BRF2Q9HAW0 MIR335-201ENST00000362173 94 ntBASIC1.45□□□□□ -2.18
BRF2Q9HAW0 Y_RNA.217-201ENST00000364214 105 ntBASIC1.45□□□□□ -2.18
BRF2Q9HAW0 Y_RNA.796-201ENST00000364268 102 ntBASIC1.45□□□□□ -2.18
BRF2Q9HAW0 Y_RNA.288-201ENST00000364854 92 ntBASIC1.45□□□□□ -2.18
BRF2Q9HAW0 Y_RNA.799-201ENST00000364992 102 ntBASIC1.45□□□□□ -2.18
BRF2Q9HAW0 SNORD50B-201ENST00000364995 70 ntBASIC1.45□□□□□ -2.18
BRF2Q9HAW0 MIR320A-201ENST00000385302 82 ntBASIC1.45□□□□□ -2.18
BRF2Q9HAW0 CYCSP49-201ENST00000420810 319 ntBASIC1.45□□□□□ -2.18
BRF2Q9HAW0 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.45□□□□□ -2.18
BRF2Q9HAW0 Y_RNA.641-201ENST00000459414 105 ntBASIC1.45□□□□□ -2.18
BRF2Q9HAW0 AC023790.1-201ENST00000482174 347 ntBASIC1.45□□□□□ -2.18
BRF2Q9HAW0 AC006006.1-201ENST00000603082 144 ntBASIC1.45□□□□□ -2.18
BRF2Q9HAW0 U2.14-201ENST00000615943 113 ntBASIC1.45□□□□□ -2.18
BRF2Q9HAW0 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.44□□□□□ -2.18
BRF2Q9HAW0 Y_RNA.54-201ENST00000362766 105 ntBASIC1.44□□□□□ -2.18
BRF2Q9HAW0 RNA5SP190-201ENST00000365222 118 ntBASIC1.44□□□□□ -2.18
BRF2Q9HAW0 Y_RNA.396-201ENST00000383949 103 ntBASIC1.44□□□□□ -2.18
BRF2Q9HAW0 MIR15B-201ENST00000385045 98 ntBASIC1.44□□□□□ -2.18
BRF2Q9HAW0 MIR1304-201ENST00000408243 91 ntBASIC1.44□□□□□ -2.18
BRF2Q9HAW0 MIR1289-2-201ENST00000408360 111 ntBASIC1.44□□□□□ -2.18
BRF2Q9HAW0 Y_RNA.590-201ENST00000410140 107 ntBASIC1.44□□□□□ -2.18
BRF2Q9HAW0 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC1.44□□□□□ -2.18
BRF2Q9HAW0 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.44□□□□□ -2.18
BRF2Q9HAW0 RNU6-947P-201ENST00000516264 106 ntBASIC1.44□□□□□ -2.18
BRF2Q9HAW0 RNU6-917P-201ENST00000516294 104 ntBASIC1.44□□□□□ -2.18
BRF2Q9HAW0 SNORD53B-201ENST00000577887 78 ntBASIC1.44□□□□□ -2.18
BRF2Q9HAW0 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
BRF2Q9HAW0 MIR8065-201ENST00000620577 100 ntBASIC1.44□□□□□ -2.18
BRF2Q9HAW0 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.44□□□□□ -2.18
BRF2Q9HAW0 Y_RNA.117-201ENST00000363294 101 ntBASIC1.43□□□□□ -2.18
BRF2Q9HAW0 Y_RNA.242-201ENST00000364473 110 ntBASIC1.43□□□□□ -2.18
BRF2Q9HAW0 RNU6-740P-201ENST00000364734 105 ntBASIC1.43□□□□□ -2.18
BRF2Q9HAW0 Y_RNA.336-201ENST00000365307 109 ntBASIC1.43□□□□□ -2.18
BRF2Q9HAW0 RNU6-442P-201ENST00000383968 104 ntBASIC1.43□□□□□ -2.18
BRF2Q9HAW0 RNU6-211P-201ENST00000384047 107 ntBASIC1.43□□□□□ -2.18
BRF2Q9HAW0 SNORD26-201ENST00000384147 75 ntBASIC1.43□□□□□ -2.18
BRF2Q9HAW0 Y_RNA.556-201ENST00000384677 113 ntBASIC1.43□□□□□ -2.18
BRF2Q9HAW0 MIR516B2-201ENST00000385190 85 ntBASIC1.43□□□□□ -2.18
BRF2Q9HAW0 MIR1298-201ENST00000408783 112 ntBASIC1.43□□□□□ -2.18
BRF2Q9HAW0 RNU6-383P-201ENST00000410864 94 ntBASIC1.43□□□□□ -2.18
BRF2Q9HAW0 MTCYBP9-201ENST00000431021 303 ntBASIC1.43□□□□□ -2.18
BRF2Q9HAW0 AL008718.3-201ENST00000610217 321 ntBASIC1.43□□□□□ -2.18
BRF2Q9HAW0 Y_RNA.802-201ENST00000614892 130 ntBASIC1.43□□□□□ -2.18
BRF2Q9HAW0 RNU6-969P-201ENST00000383900 105 ntBASIC1.42□□□□□ -2.18
BRF2Q9HAW0 MIR136-201ENST00000385207 82 ntBASIC1.42□□□□□ -2.18
BRF2Q9HAW0 SNORA67.5-201ENST00000391036 107 ntBASIC1.42□□□□□ -2.18
BRF2Q9HAW0 SNORA11.2-201ENST00000408318 127 ntBASIC1.42□□□□□ -2.18
BRF2Q9HAW0 RPL39P39-201ENST00000455840 151 ntBASIC1.42□□□□□ -2.18
BRF2Q9HAW0 RNU6-472P-201ENST00000384299 107 ntBASIC1.41□□□□□ -2.18
BRF2Q9HAW0 SNORD38C-201ENST00000384381 69 ntBASIC1.41□□□□□ -2.18
BRF2Q9HAW0 SNORA67.6-201ENST00000391093 99 ntBASIC1.41□□□□□ -2.18
BRF2Q9HAW0 MIR1323-201ENST00000408090 73 ntBASIC1.41□□□□□ -2.18
BRF2Q9HAW0 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.41□□□□□ -2.18
BRF2Q9HAW0 SNORA31.24-201ENST00000517232 57 ntBASIC1.41□□□□□ -2.18
BRF2Q9HAW0 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
BRF2Q9HAW0 Y_RNA.133-201ENST00000363428 110 ntBASIC1.4□□□□□ -2.19
BRF2Q9HAW0 RNU6-60P-201ENST00000364792 103 ntBASIC1.4□□□□□ -2.19
BRF2Q9HAW0 SNORA8.3-201ENST00000384679 139 ntBASIC1.4□□□□□ -2.19
BRF2Q9HAW0 MIR526A1-201ENST00000384897 85 ntBASIC1.4□□□□□ -2.19
BRF2Q9HAW0 RNA5SP496-201ENST00000391240 109 ntBASIC1.4□□□□□ -2.19
BRF2Q9HAW0 RNU6-955P-201ENST00000410497 104 ntBASIC1.4□□□□□ -2.19
BRF2Q9HAW0 AC015922.2-201ENST00000435593 184 ntBASIC1.4□□□□□ -2.19
BRF2Q9HAW0 NDUFA4P2-201ENST00000489989 244 ntBASIC1.4□□□□□ -2.19
BRF2Q9HAW0 U8.1-201ENST00000362843 134 ntBASIC1.39□□□□□ -2.19
BRF2Q9HAW0 RNU1-42P-201ENST00000364033 160 ntBASIC1.39□□□□□ -2.19
BRF2Q9HAW0 Y_RNA.352-201ENST00000365439 102 ntBASIC1.39□□□□□ -2.19
BRF2Q9HAW0 SNORD41-201ENST00000386967 70 ntBASIC1.39□□□□□ -2.19
BRF2Q9HAW0 MIR1261-201ENST00000408659 82 ntBASIC1.39□□□□□ -2.19
BRF2Q9HAW0 MIR548H3-201ENST00000408771 118 ntBASIC1.39□□□□□ -2.19
BRF2Q9HAW0 RNU2-38P-201ENST00000410856 79 ntBASIC1.39□□□□□ -2.19
BRF2Q9HAW0 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.39□□□□□ -2.19
BRF2Q9HAW0 AL354695.1-201ENST00000427935 228 ntBASIC1.39□□□□□ -2.19
BRF2Q9HAW0 MTND3P2-201ENST00000438452 342 ntBASIC1.39□□□□□ -2.19
BRF2Q9HAW0 SNORD13-201ENST00000459299 104 ntBASIC1.39□□□□□ -2.19
BRF2Q9HAW0 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC1.39□□□□□ -2.19
BRF2Q9HAW0 AC012433.1-201ENST00000588916 398 ntBASIC1.39□□□□□ -2.19
BRF2Q9HAW0 AL049861.1-201ENST00000603130 150 ntBASIC1.39□□□□□ -2.19
BRF2Q9HAW0 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.39□□□□□ -2.19
BRF2Q9HAW0 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
BRF2Q9HAW0 RNU4-10P-201ENST00000364383 140 ntBASIC1.38□□□□□ -2.19
BRF2Q9HAW0 RNU6-196P-201ENST00000384315 107 ntBASIC1.38□□□□□ -2.19
BRF2Q9HAW0 AL603910.2-201ENST00000407268 136 ntBASIC1.38□□□□□ -2.19
BRF2Q9HAW0 SNORD11-201ENST00000459124 84 ntBASIC1.38□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 204.1 ms