Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.04□□□□□ -2.24
RNF41Q9H4P4 AC127455.1-201ENST00000565496 145 ntBASIC1.04□□□□□ -2.24
RNF41Q9H4P4 MIR4680-201ENST00000580906 66 ntBASIC1.04□□□□□ -2.24
RNF41Q9H4P4 MIR376A1-201ENST00000616574 68 ntBASIC1.04□□□□□ -2.24
RNF41Q9H4P4 NAA50-211ENST00000630058 177 ntTSL 5 BASIC1.04□□□□□ -2.24
RNF41Q9H4P4 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
RNF41Q9H4P4 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC1.04□□□□□ -2.24
RNF41Q9H4P4 snoU2_19.2-201ENST00000363024 80 ntBASIC1.03□□□□□ -2.24
RNF41Q9H4P4 RNU6-1048P-201ENST00000364054 107 ntBASIC1.03□□□□□ -2.24
RNF41Q9H4P4 SNORA26.5-201ENST00000391215 123 ntBASIC1.03□□□□□ -2.24
RNF41Q9H4P4 AL451046.2-201ENST00000403074 277 ntBASIC1.03□□□□□ -2.24
RNF41Q9H4P4 RNU6-101P-201ENST00000410323 104 ntBASIC1.03□□□□□ -2.24
RNF41Q9H4P4 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC1.03□□□□□ -2.24
RNF41Q9H4P4 AC024067.1-201ENST00000426199 223 ntBASIC1.03□□□□□ -2.24
RNF41Q9H4P4 SNRPGP10-201ENST00000432323 225 ntBASIC1.03□□□□□ -2.24
RNF41Q9H4P4 POLR2KP2-201ENST00000438155 177 ntBASIC1.03□□□□□ -2.24
RNF41Q9H4P4 U8.19-201ENST00000459095 133 ntBASIC1.03□□□□□ -2.24
RNF41Q9H4P4 OR2A41P-201ENST00000473586 105 ntBASIC1.03□□□□□ -2.24
RNF41Q9H4P4 AC113195.1-201ENST00000579952 141 ntBASIC1.03□□□□□ -2.24
RNF41Q9H4P4 HSPE1P19-201ENST00000603327 295 ntBASIC1.03□□□□□ -2.24
RNF41Q9H4P4 AC068700.1-201ENST00000565862 3754 ntBASIC1.02□□□□□ -2.25
RNF41Q9H4P4 Y_RNA.26-201ENST00000362539 101 ntBASIC1.02□□□□□ -2.25
RNF41Q9H4P4 RNU6-770P-201ENST00000363929 105 ntBASIC1.02□□□□□ -2.25
RNF41Q9H4P4 Y_RNA.203-201ENST00000364106 102 ntBASIC1.02□□□□□ -2.25
RNF41Q9H4P4 Y_RNA.796-201ENST00000364268 102 ntBASIC1.02□□□□□ -2.25
RNF41Q9H4P4 RNU6-1187P-201ENST00000364771 110 ntBASIC1.02□□□□□ -2.25
RNF41Q9H4P4 Y_RNA.799-201ENST00000364992 102 ntBASIC1.02□□□□□ -2.25
RNF41Q9H4P4 RNU6-806P-201ENST00000365147 105 ntBASIC1.02□□□□□ -2.25
RNF41Q9H4P4 Y_RNA.336-201ENST00000365307 109 ntBASIC1.02□□□□□ -2.25
RNF41Q9H4P4 Y_RNA.363-201ENST00000365529 113 ntBASIC1.02□□□□□ -2.25
RNF41Q9H4P4 SNORA72.4-201ENST00000384174 132 ntBASIC1.02□□□□□ -2.25
RNF41Q9H4P4 Y_RNA.455-201ENST00000384230 98 ntBASIC1.02□□□□□ -2.25
RNF41Q9H4P4 Y_RNA.527-201ENST00000384573 102 ntBASIC1.02□□□□□ -2.25
RNF41Q9H4P4 MIR499A-201ENST00000384903 122 ntBASIC1.02□□□□□ -2.25
RNF41Q9H4P4 Y_RNA.581-201ENST00000391017 97 ntBASIC1.02□□□□□ -2.25
RNF41Q9H4P4 Y_RNA.602-201ENST00000410535 92 ntBASIC1.02□□□□□ -2.25
RNF41Q9H4P4 LINC01399-202ENST00000458450 244 ntBASIC1.02□□□□□ -2.25
RNF41Q9H4P4 RNU7-141P-201ENST00000459304 62 ntBASIC1.02□□□□□ -2.25
RNF41Q9H4P4 AC048334.1-201ENST00000477975 159 ntBASIC1.02□□□□□ -2.25
RNF41Q9H4P4 RNU6-322P-201ENST00000516010 103 ntBASIC1.02□□□□□ -2.25
RNF41Q9H4P4 RNU6-764P-201ENST00000516396 105 ntBASIC1.02□□□□□ -2.25
RNF41Q9H4P4 SNORD45.4-201ENST00000516629 73 ntBASIC1.02□□□□□ -2.25
RNF41Q9H4P4 MIR3973-201ENST00000579824 107 ntBASIC1.02□□□□□ -2.25
RNF41Q9H4P4 FAM106DP-201ENST00000586416 501 ntBASIC1.02□□□□□ -2.25
RNF41Q9H4P4 AC211469.2-201ENST00000605461 205 ntBASIC1.02□□□□□ -2.25
RNF41Q9H4P4 MIR548AY-201ENST00000617669 107 ntBASIC1.02□□□□□ -2.25
RNF41Q9H4P4 MIR373-201ENST00000362273 69 ntBASIC1.01□□□□□ -2.25
RNF41Q9H4P4 Y_RNA.153-201ENST00000363615 91 ntBASIC1.01□□□□□ -2.25
RNF41Q9H4P4 Y_RNA.276-201ENST00000364732 109 ntBASIC1.01□□□□□ -2.25
RNF41Q9H4P4 SNORA70.7-201ENST00000384159 133 ntBASIC1.01□□□□□ -2.25
RNF41Q9H4P4 MIR215-201ENST00000384858 110 ntBASIC1.01□□□□□ -2.25
RNF41Q9H4P4 MLLT10P1-201ENST00000418346 262 ntBASIC1.01□□□□□ -2.25
RNF41Q9H4P4 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.01□□□□□ -2.25
RNF41Q9H4P4 NDUFA4P2-201ENST00000489989 244 ntBASIC1.01□□□□□ -2.25
RNF41Q9H4P4 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC1.01□□□□□ -2.25
RNF41Q9H4P4 SNORD116-28-201ENST00000516123 91 ntBASIC1.01□□□□□ -2.25
RNF41Q9H4P4 AC090142.3-201ENST00000519012 385 ntBASIC1.01□□□□□ -2.25
RNF41Q9H4P4 AL355297.3-201ENST00000604082 446 ntBASIC1.01□□□□□ -2.25
RNF41Q9H4P4 FAM71BP1-201ENST00000604431 523 ntBASIC1.01□□□□□ -2.25
RNF41Q9H4P4 PRELID3BP2-201ENST00000605362 201 ntBASIC1.01□□□□□ -2.25
RNF41Q9H4P4 AL022345.2-201ENST00000606307 135 ntBASIC1.01□□□□□ -2.25
RNF41Q9H4P4 AL096861.1-201ENST00000610899 123 ntBASIC1.01□□□□□ -2.25
RNF41Q9H4P4 AC027335.2-201ENST00000624030 375 ntBASIC1.01□□□□□ -2.25
RNF41Q9H4P4 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1□□□□□ -2.25
RNF41Q9H4P4 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1□□□□□ -2.25
RNF41Q9H4P4 RNU4-90P-201ENST00000362773 141 ntBASIC1□□□□□ -2.25
RNF41Q9H4P4 RNU6-1209P-201ENST00000363655 107 ntBASIC1□□□□□ -2.25
RNF41Q9H4P4 RNU6-674P-201ENST00000363831 107 ntBASIC1□□□□□ -2.25
RNF41Q9H4P4 Y_RNA.191-201ENST00000363972 113 ntBASIC1□□□□□ -2.25
RNF41Q9H4P4 SNORD114-22-201ENST00000365423 72 ntBASIC1□□□□□ -2.25
RNF41Q9H4P4 Y_RNA.541-201ENST00000384640 113 ntBASIC1□□□□□ -2.25
RNF41Q9H4P4 MIR452-201ENST00000385020 85 ntBASIC1□□□□□ -2.25
RNF41Q9H4P4 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC1□□□□□ -2.25
RNF41Q9H4P4 RNU6ATAC19P-201ENST00000408096 110 ntBASIC1□□□□□ -2.25
RNF41Q9H4P4 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1□□□□□ -2.25
RNF41Q9H4P4 SNORA36B-201ENST00000410438 131 ntBASIC1□□□□□ -2.25
RNF41Q9H4P4 MTCO1P5-201ENST00000433573 344 ntBASIC1□□□□□ -2.25
RNF41Q9H4P4 SNRPGP14-201ENST00000435400 219 ntBASIC1□□□□□ -2.25
RNF41Q9H4P4 AC245047.7-201ENST00000440265 293 ntBASIC1□□□□□ -2.25
RNF41Q9H4P4 Y_RNA.637-201ENST00000459424 114 ntBASIC1□□□□□ -2.25
RNF41Q9H4P4 RPS26P48-201ENST00000491713 339 ntBASIC1□□□□□ -2.25
RNF41Q9H4P4 RPL23AP54-201ENST00000495129 419 ntBASIC1□□□□□ -2.25
RNF41Q9H4P4 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1□□□□□ -2.25
RNF41Q9H4P4 RNU7-40P-201ENST00000516397 64 ntBASIC1□□□□□ -2.25
RNF41Q9H4P4 RNU6-1153P-201ENST00000516760 105 ntBASIC1□□□□□ -2.25
RNF41Q9H4P4 AC131281.1-201ENST00000522984 164 ntBASIC1□□□□□ -2.25
RNF41Q9H4P4 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC1□□□□□ -2.25
RNF41Q9H4P4 MIR3192-201ENST00000584920 77 ntBASIC1□□□□□ -2.25
RNF41Q9H4P4 AC134026.1-201ENST00000623249 2239 ntBASIC0.99□□□□□ -2.25
RNF41Q9H4P4 Y_RNA.202-201ENST00000364083 110 ntBASIC0.99□□□□□ -2.25
RNF41Q9H4P4 SNORA33.2-201ENST00000365413 134 ntBASIC0.99□□□□□ -2.25
RNF41Q9H4P4 RNU6-1227P-201ENST00000383981 107 ntBASIC0.99□□□□□ -2.25
RNF41Q9H4P4 SNORA25-201ENST00000384384 134 ntBASIC0.99□□□□□ -2.25
RNF41Q9H4P4 Y_RNA.569-201ENST00000384749 103 ntBASIC0.99□□□□□ -2.25
RNF41Q9H4P4 MIR1278-201ENST00000408753 81 ntBASIC0.99□□□□□ -2.25
RNF41Q9H4P4 SNORA31.2-201ENST00000516019 134 ntBASIC0.99□□□□□ -2.25
RNF41Q9H4P4 RNA5SP404-201ENST00000517118 132 ntBASIC0.99□□□□□ -2.25
RNF41Q9H4P4 MIR4698-201ENST00000577795 80 ntBASIC0.99□□□□□ -2.25
RNF41Q9H4P4 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC0.99□□□□□ -2.25
RNF41Q9H4P4 AL357312.1-201ENST00000603879 298 ntBASIC0.99□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms