Protein–RNA interactions for Protein: Q9H3S1

SEMA4A, Semaphorin-4A, humanhuman

Predictions only

Length 761 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4AQ9H3S1 AL121890.5-201ENST00000620848 304 ntBASIC2.66□□□□□ -1.98
SEMA4AQ9H3S1 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC2.66□□□□□ -1.98
SEMA4AQ9H3S1 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
SEMA4AQ9H3S1 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.65□□□□□ -1.99
SEMA4AQ9H3S1 SNORA72-201ENST00000384339 132 ntBASIC2.65□□□□□ -1.99
SEMA4AQ9H3S1 MIR27B-201ENST00000385129 97 ntBASIC2.65□□□□□ -1.99
SEMA4AQ9H3S1 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.65□□□□□ -1.99
SEMA4AQ9H3S1 RPS27P22-201ENST00000478056 241 ntBASIC2.65□□□□□ -1.99
SEMA4AQ9H3S1 MIR5582-201ENST00000579697 68 ntBASIC2.65□□□□□ -1.99
SEMA4AQ9H3S1 uc_338.28-201ENST00000612082 187 ntBASIC2.65□□□□□ -1.99
SEMA4AQ9H3S1 U6.95-201ENST00000636931 70 ntBASIC2.65□□□□□ -1.99
SEMA4AQ9H3S1 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
SEMA4AQ9H3S1 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.65□□□□□ -1.99
SEMA4AQ9H3S1 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.64□□□□□ -1.99
SEMA4AQ9H3S1 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
SEMA4AQ9H3S1 Y_RNA.226-201ENST00000364337 114 ntBASIC2.64□□□□□ -1.99
SEMA4AQ9H3S1 Y_RNA.338-201ENST00000365320 114 ntBASIC2.64□□□□□ -1.99
SEMA4AQ9H3S1 RPL23AP42-201ENST00000471152 471 ntBASIC2.64□□□□□ -1.99
SEMA4AQ9H3S1 MIR5092-201ENST00000583139 88 ntBASIC2.64□□□□□ -1.99
SEMA4AQ9H3S1 AC131055.1-201ENST00000584626 316 ntBASIC2.64□□□□□ -1.99
SEMA4AQ9H3S1 AL137847.3-201ENST00000611521 109 ntBASIC2.64□□□□□ -1.99
SEMA4AQ9H3S1 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
SEMA4AQ9H3S1 RNA5SP289-201ENST00000362332 137 ntBASIC2.63□□□□□ -1.99
SEMA4AQ9H3S1 Y_RNA.120-201ENST00000363304 110 ntBASIC2.63□□□□□ -1.99
SEMA4AQ9H3S1 SNORA38-201ENST00000363946 132 ntBASIC2.63□□□□□ -1.99
SEMA4AQ9H3S1 Y_RNA.634-201ENST00000364811 113 ntBASIC2.63□□□□□ -1.99
SEMA4AQ9H3S1 MIR515-2-201ENST00000384883 83 ntBASIC2.63□□□□□ -1.99
SEMA4AQ9H3S1 MIR515-1-201ENST00000384884 83 ntBASIC2.63□□□□□ -1.99
SEMA4AQ9H3S1 MIR29C-201ENST00000385231 88 ntBASIC2.63□□□□□ -1.99
SEMA4AQ9H3S1 RNA5SP496-201ENST00000391240 109 ntBASIC2.63□□□□□ -1.99
SEMA4AQ9H3S1 RNY4P30-201ENST00000410216 95 ntBASIC2.63□□□□□ -1.99
SEMA4AQ9H3S1 AC060773.1-201ENST00000421698 310 ntBASIC2.63□□□□□ -1.99
SEMA4AQ9H3S1 RPS12P2-201ENST00000439728 269 ntBASIC2.63□□□□□ -1.99
SEMA4AQ9H3S1 RPS4XP11-201ENST00000446897 772 ntBASIC2.63□□□□□ -1.99
SEMA4AQ9H3S1 RPS26P45-201ENST00000471748 340 ntBASIC2.63□□□□□ -1.99
SEMA4AQ9H3S1 AC011406.1-201ENST00000512440 370 ntBASIC2.63□□□□□ -1.99
SEMA4AQ9H3S1 IGKV1-22-201ENST00000524313 326 ntBASIC2.63□□□□□ -1.99
SEMA4AQ9H3S1 MIR4438-201ENST00000585271 93 ntBASIC2.63□□□□□ -1.99
SEMA4AQ9H3S1 U6.73-201ENST00000619194 103 ntBASIC2.63□□□□□ -1.99
SEMA4AQ9H3S1 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.63□□□□□ -1.99
SEMA4AQ9H3S1 AC092881.1-201ENST00000638218 2733 ntBASIC2.63□□□□□ -1.99
SEMA4AQ9H3S1 snoU2-30.2-201ENST00000362805 70 ntBASIC2.62□□□□□ -1.99
SEMA4AQ9H3S1 RNU1-22P-201ENST00000363334 158 ntBASIC2.62□□□□□ -1.99
SEMA4AQ9H3S1 Y_RNA.164-201ENST00000363709 102 ntBASIC2.62□□□□□ -1.99
SEMA4AQ9H3S1 RNU6-674P-201ENST00000363831 107 ntBASIC2.62□□□□□ -1.99
SEMA4AQ9H3S1 RNU6-117P-201ENST00000365415 107 ntBASIC2.62□□□□□ -1.99
SEMA4AQ9H3S1 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.62□□□□□ -1.99
SEMA4AQ9H3S1 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.62□□□□□ -1.99
SEMA4AQ9H3S1 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
SEMA4AQ9H3S1 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC2.62□□□□□ -1.99
SEMA4AQ9H3S1 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.62□□□□□ -1.99
SEMA4AQ9H3S1 AC097462.1-201ENST00000514125 324 ntBASIC2.62□□□□□ -1.99
SEMA4AQ9H3S1 IGLV3-17-201ENST00000519099 244 ntBASIC2.62□□□□□ -1.99
SEMA4AQ9H3S1 AC121758.2-201ENST00000553271 193 ntBASIC2.62□□□□□ -1.99
SEMA4AQ9H3S1 Pinc.1-201ENST00000616452 154 ntBASIC2.62□□□□□ -1.99
SEMA4AQ9H3S1 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.62□□□□□ -1.99
SEMA4AQ9H3S1 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
SEMA4AQ9H3S1 Y_RNA.52-201ENST00000362760 96 ntBASIC2.61□□□□□ -1.99
SEMA4AQ9H3S1 RNU6-1209P-201ENST00000363655 107 ntBASIC2.61□□□□□ -1.99
SEMA4AQ9H3S1 Y_RNA.203-201ENST00000364106 102 ntBASIC2.61□□□□□ -1.99
SEMA4AQ9H3S1 SNORD18B-201ENST00000365659 72 ntBASIC2.61□□□□□ -1.99
SEMA4AQ9H3S1 Y_RNA.486-201ENST00000384398 107 ntBASIC2.61□□□□□ -1.99
SEMA4AQ9H3S1 Y_RNA.495-201ENST00000384435 112 ntBASIC2.61□□□□□ -1.99
SEMA4AQ9H3S1 MIR1263-201ENST00000408324 86 ntBASIC2.61□□□□□ -1.99
SEMA4AQ9H3S1 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.61□□□□□ -1.99
SEMA4AQ9H3S1 AC018634.1-201ENST00000437554 401 ntBASIC2.61□□□□□ -1.99
SEMA4AQ9H3S1 Y_RNA.649-201ENST00000459077 103 ntBASIC2.61□□□□□ -1.99
SEMA4AQ9H3S1 AC007229.1-201ENST00000590455 412 ntBASIC2.61□□□□□ -1.99
SEMA4AQ9H3S1 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
SEMA4AQ9H3S1 AL022345.2-201ENST00000606307 135 ntBASIC2.61□□□□□ -1.99
SEMA4AQ9H3S1 uc_338.4-201ENST00000616635 176 ntBASIC2.61□□□□□ -1.99
SEMA4AQ9H3S1 UGP2-230ENST00000626380 276 ntTSL 5 BASIC2.61□□□□□ -1.99
SEMA4AQ9H3S1 ZNF271P-202ENST00000465539 1970 ntBASIC2.61□□□□□ -1.99
SEMA4AQ9H3S1 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
SEMA4AQ9H3S1 Y_RNA.116-201ENST00000363292 103 ntBASIC2.6□□□□□ -1.99
SEMA4AQ9H3S1 RNU1-96P-201ENST00000364163 162 ntBASIC2.6□□□□□ -1.99
SEMA4AQ9H3S1 Y_RNA.796-201ENST00000364268 102 ntBASIC2.6□□□□□ -1.99
SEMA4AQ9H3S1 Y_RNA.799-201ENST00000364992 102 ntBASIC2.6□□□□□ -1.99
SEMA4AQ9H3S1 RNU6-1072P-201ENST00000384703 107 ntBASIC2.6□□□□□ -1.99
SEMA4AQ9H3S1 RNU6-443P-201ENST00000384780 107 ntBASIC2.6□□□□□ -1.99
SEMA4AQ9H3S1 MIR1262-201ENST00000408276 93 ntBASIC2.6□□□□□ -1.99
SEMA4AQ9H3S1 Y_RNA.617-201ENST00000410920 90 ntBASIC2.6□□□□□ -1.99
SEMA4AQ9H3S1 RNU2-55P-201ENST00000411146 174 ntBASIC2.6□□□□□ -1.99
SEMA4AQ9H3S1 RNU7-26P-201ENST00000458980 63 ntBASIC2.6□□□□□ -1.99
SEMA4AQ9H3S1 SNORD11-201ENST00000459124 84 ntBASIC2.6□□□□□ -1.99
SEMA4AQ9H3S1 Y_RNA.651-201ENST00000459380 103 ntBASIC2.6□□□□□ -1.99
SEMA4AQ9H3S1 SNORA72.7-201ENST00000516349 94 ntBASIC2.6□□□□□ -1.99
SEMA4AQ9H3S1 SNORA18.4-201ENST00000516440 124 ntBASIC2.6□□□□□ -1.99
SEMA4AQ9H3S1 RNU7-172P-201ENST00000517125 64 ntBASIC2.6□□□□□ -1.99
SEMA4AQ9H3S1 RNA5SP402-201ENST00000517148 110 ntBASIC2.6□□□□□ -1.99
SEMA4AQ9H3S1 MIR3129-201ENST00000581095 76 ntBASIC2.6□□□□□ -1.99
SEMA4AQ9H3S1 AC025166.1-201ENST00000612411 163 ntBASIC2.6□□□□□ -1.99
SEMA4AQ9H3S1 ICE2P2-201ENST00000483823 2787 ntBASIC2.59□□□□□ -1.99
SEMA4AQ9H3S1 SNORA6-201ENST00000384033 151 ntBASIC2.59□□□□□ -1.99
SEMA4AQ9H3S1 SNORA1-201ENST00000384107 130 ntBASIC2.59□□□□□ -1.99
SEMA4AQ9H3S1 HMGN2P34-201ENST00000437647 269 ntBASIC2.59□□□□□ -1.99
SEMA4AQ9H3S1 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.59□□□□□ -1.99
SEMA4AQ9H3S1 RN7SKP19-201ENST00000516016 252 ntBASIC2.59□□□□□ -1.99
SEMA4AQ9H3S1 SNORD77.4-201ENST00000516158 81 ntBASIC2.59□□□□□ -1.99
SEMA4AQ9H3S1 SNORA31.11-201ENST00000516528 139 ntBASIC2.59□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 485.3 ms