Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 RNU6-1054P-201ENST00000411293 104 ntBASIC1.08□□□□□ -2.24
UBQLN3Q9H347 AC245047.7-201ENST00000440265 293 ntBASIC1.08□□□□□ -2.24
UBQLN3Q9H347 HSPE1P25-201ENST00000455484 251 ntBASIC1.08□□□□□ -2.24
UBQLN3Q9H347 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.08□□□□□ -2.24
UBQLN3Q9H347 RNU6-496P-201ENST00000516145 99 ntBASIC1.08□□□□□ -2.24
UBQLN3Q9H347 RNU6-191P-201ENST00000516295 94 ntBASIC1.08□□□□□ -2.24
UBQLN3Q9H347 RNY3P15-201ENST00000516297 97 ntBASIC1.08□□□□□ -2.24
UBQLN3Q9H347 SNORD111.1-201ENST00000516421 86 ntBASIC1.08□□□□□ -2.24
UBQLN3Q9H347 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC1.08□□□□□ -2.24
UBQLN3Q9H347 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC1.08□□□□□ -2.24
UBQLN3Q9H347 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
UBQLN3Q9H347 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
UBQLN3Q9H347 Y_RNA.105-201ENST00000363182 111 ntBASIC1.07□□□□□ -2.24
UBQLN3Q9H347 Y_RNA.158-201ENST00000363651 101 ntBASIC1.07□□□□□ -2.24
UBQLN3Q9H347 RNU6-1209P-201ENST00000363655 107 ntBASIC1.07□□□□□ -2.24
UBQLN3Q9H347 SNORD14E-201ENST00000364009 85 ntBASIC1.07□□□□□ -2.24
UBQLN3Q9H347 RNU6-801P-201ENST00000364087 105 ntBASIC1.07□□□□□ -2.24
UBQLN3Q9H347 Y_RNA.222-201ENST00000364264 102 ntBASIC1.07□□□□□ -2.24
UBQLN3Q9H347 SNORA72.4-201ENST00000384174 132 ntBASIC1.07□□□□□ -2.24
UBQLN3Q9H347 Y_RNA.455-201ENST00000384230 98 ntBASIC1.07□□□□□ -2.24
UBQLN3Q9H347 MTCO2P33-201ENST00000402100 465 ntBASIC1.07□□□□□ -2.24
UBQLN3Q9H347 MIR1278-201ENST00000408753 81 ntBASIC1.07□□□□□ -2.24
UBQLN3Q9H347 HMGN2P32-201ENST00000444648 269 ntBASIC1.07□□□□□ -2.24
UBQLN3Q9H347 AC090142.3-201ENST00000519012 385 ntBASIC1.07□□□□□ -2.24
UBQLN3Q9H347 AC131281.1-201ENST00000522984 164 ntBASIC1.07□□□□□ -2.24
UBQLN3Q9H347 AC020661.2-201ENST00000560114 134 ntBASIC1.07□□□□□ -2.24
UBQLN3Q9H347 AL096861.1-201ENST00000610899 123 ntBASIC1.07□□□□□ -2.24
UBQLN3Q9H347 MIR8070-201ENST00000616510 88 ntBASIC1.07□□□□□ -2.24
UBQLN3Q9H347 AC027335.2-201ENST00000624030 375 ntBASIC1.07□□□□□ -2.24
UBQLN3Q9H347 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
UBQLN3Q9H347 Y_RNA.202-201ENST00000364083 110 ntBASIC1.06□□□□□ -2.24
UBQLN3Q9H347 AC117470.1-201ENST00000381974 330 ntBASIC1.06□□□□□ -2.24
UBQLN3Q9H347 SNORA26.5-201ENST00000391215 123 ntBASIC1.06□□□□□ -2.24
UBQLN3Q9H347 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.06□□□□□ -2.24
UBQLN3Q9H347 AL591704.2-201ENST00000421658 181 ntBASIC1.06□□□□□ -2.24
UBQLN3Q9H347 RNU6-437P-201ENST00000459408 95 ntBASIC1.06□□□□□ -2.24
UBQLN3Q9H347 RNU6-1153P-201ENST00000516760 105 ntBASIC1.06□□□□□ -2.24
UBQLN3Q9H347 Y_RNA.701-201ENST00000516812 110 ntBASIC1.06□□□□□ -2.24
UBQLN3Q9H347 SNORA18.7-201ENST00000516910 131 ntBASIC1.06□□□□□ -2.24
UBQLN3Q9H347 AC007742.2-201ENST00000618226 398 ntBASIC1.06□□□□□ -2.24
UBQLN3Q9H347 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.05□□□□□ -2.24
UBQLN3Q9H347 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
UBQLN3Q9H347 RNU6-770P-201ENST00000363929 105 ntBASIC1.05□□□□□ -2.24
UBQLN3Q9H347 Y_RNA.210-201ENST00000364161 110 ntBASIC1.05□□□□□ -2.24
UBQLN3Q9H347 Y_RNA.581-201ENST00000391017 97 ntBASIC1.05□□□□□ -2.24
UBQLN3Q9H347 MIR1285-1-201ENST00000408593 84 ntBASIC1.05□□□□□ -2.24
UBQLN3Q9H347 RNU6-121P-201ENST00000410525 99 ntBASIC1.05□□□□□ -2.24
UBQLN3Q9H347 ELOCP20-201ENST00000422460 345 ntBASIC1.05□□□□□ -2.24
UBQLN3Q9H347 OR2A41P-201ENST00000473586 105 ntBASIC1.05□□□□□ -2.24
UBQLN3Q9H347 AC098869.1-201ENST00000481627 292 ntBASIC1.05□□□□□ -2.24
UBQLN3Q9H347 MRPS35P2-201ENST00000508242 191 ntBASIC1.05□□□□□ -2.24
UBQLN3Q9H347 RNU6-764P-201ENST00000516396 105 ntBASIC1.05□□□□□ -2.24
UBQLN3Q9H347 RPL23AP91-201ENST00000569211 455 ntBASIC1.05□□□□□ -2.24
UBQLN3Q9H347 AC113195.1-201ENST00000579952 141 ntBASIC1.05□□□□□ -2.24
UBQLN3Q9H347 MIR4680-201ENST00000580906 66 ntBASIC1.05□□□□□ -2.24
UBQLN3Q9H347 MIR2681-201ENST00000581814 105 ntBASIC1.05□□□□□ -2.24
UBQLN3Q9H347 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC1.05□□□□□ -2.24
UBQLN3Q9H347 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC1.05□□□□□ -2.24
UBQLN3Q9H347 AL512605.2-201ENST00000592972 256 ntBASIC1.05□□□□□ -2.24
UBQLN3Q9H347 AL356055.1-201ENST00000602528 446 ntBASIC1.05□□□□□ -2.24
UBQLN3Q9H347 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.05□□□□□ -2.24
UBQLN3Q9H347 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC1.05□□□□□ -2.24
UBQLN3Q9H347 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.05□□□□□ -2.24
UBQLN3Q9H347 AC091895.1-201ENST00000624494 256 ntBASIC1.05□□□□□ -2.24
UBQLN3Q9H347 Y_RNA.19-201ENST00000362462 99 ntBASIC1.04□□□□□ -2.24
UBQLN3Q9H347 Y_RNA.214-201ENST00000364201 112 ntBASIC1.04□□□□□ -2.24
UBQLN3Q9H347 Y_RNA.796-201ENST00000364268 102 ntBASIC1.04□□□□□ -2.24
UBQLN3Q9H347 Y_RNA.799-201ENST00000364992 102 ntBASIC1.04□□□□□ -2.24
UBQLN3Q9H347 MIR520C-201ENST00000385005 87 ntBASIC1.04□□□□□ -2.24
UBQLN3Q9H347 RNA5SP247-201ENST00000411181 105 ntBASIC1.04□□□□□ -2.24
UBQLN3Q9H347 MTCO1P5-201ENST00000433573 344 ntBASIC1.04□□□□□ -2.24
UBQLN3Q9H347 SNORD116-28-201ENST00000516123 91 ntBASIC1.04□□□□□ -2.24
UBQLN3Q9H347 SNORA74.3-201ENST00000517108 154 ntBASIC1.04□□□□□ -2.24
UBQLN3Q9H347 MIR3192-201ENST00000584920 77 ntBASIC1.04□□□□□ -2.24
UBQLN3Q9H347 AC005357.1-201ENST00000588399 301 ntBASIC1.04□□□□□ -2.24
UBQLN3Q9H347 AL355297.3-201ENST00000604082 446 ntBASIC1.04□□□□□ -2.24
UBQLN3Q9H347 Y_RNA.136-201ENST00000363444 102 ntBASIC1.03□□□□□ -2.24
UBQLN3Q9H347 Y_RNA.152-201ENST00000363578 100 ntBASIC1.03□□□□□ -2.24
UBQLN3Q9H347 RNU1-124P-201ENST00000363861 145 ntBASIC1.03□□□□□ -2.24
UBQLN3Q9H347 RNU6-899P-201ENST00000363947 107 ntBASIC1.03□□□□□ -2.24
UBQLN3Q9H347 Y_RNA.363-201ENST00000365529 113 ntBASIC1.03□□□□□ -2.24
UBQLN3Q9H347 MIR15B-201ENST00000385045 98 ntBASIC1.03□□□□□ -2.24
UBQLN3Q9H347 RNU6-763P-201ENST00000390865 106 ntBASIC1.03□□□□□ -2.24
UBQLN3Q9H347 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC1.03□□□□□ -2.24
UBQLN3Q9H347 AC037487.3-201ENST00000606668 112 ntBASIC1.03□□□□□ -2.24
UBQLN3Q9H347 Y_RNA.11-201ENST00000362375 109 ntBASIC1.02□□□□□ -2.25
UBQLN3Q9H347 Y_RNA.226-201ENST00000364337 114 ntBASIC1.02□□□□□ -2.25
UBQLN3Q9H347 RNU6-806P-201ENST00000365147 105 ntBASIC1.02□□□□□ -2.25
UBQLN3Q9H347 RNU6-290P-201ENST00000365212 101 ntBASIC1.02□□□□□ -2.25
UBQLN3Q9H347 RNU6-969P-201ENST00000383900 105 ntBASIC1.02□□□□□ -2.25
UBQLN3Q9H347 RNU6-442P-201ENST00000383968 104 ntBASIC1.02□□□□□ -2.25
UBQLN3Q9H347 RNU6-514P-201ENST00000384208 107 ntBASIC1.02□□□□□ -2.25
UBQLN3Q9H347 SNORD38C-201ENST00000384381 69 ntBASIC1.02□□□□□ -2.25
UBQLN3Q9H347 MIR215-201ENST00000384858 110 ntBASIC1.02□□□□□ -2.25
UBQLN3Q9H347 SNORA53-201ENST00000391141 249 ntBASIC1.02□□□□□ -2.25
UBQLN3Q9H347 MIR1276-201ENST00000408707 83 ntBASIC1.02□□□□□ -2.25
UBQLN3Q9H347 MTCYBP6-201ENST00000441810 138 ntBASIC1.02□□□□□ -2.25
UBQLN3Q9H347 NDUFA4P2-201ENST00000489989 244 ntBASIC1.02□□□□□ -2.25
UBQLN3Q9H347 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC1.02□□□□□ -2.25
UBQLN3Q9H347 RNU2-31P-201ENST00000516954 155 ntBASIC1.02□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 194.4 ms