Protein–RNA interactions for Protein: Q9H2F9

CCDC68, Coiled-coil domain-containing protein 68, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC68Q9H2F9 SNORD123-201ENST00000459473 70 ntBASIC1.1□□□□□ -2.23
CCDC68Q9H2F9 TRMT112P2-201ENST00000512910 132 ntBASIC1.1□□□□□ -2.23
CCDC68Q9H2F9 RNU7-41P-201ENST00000515917 61 ntBASIC1.1□□□□□ -2.23
CCDC68Q9H2F9 AC087685.1-201ENST00000587507 141 ntBASIC1.1□□□□□ -2.23
CCDC68Q9H2F9 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.1□□□□□ -2.23
CCDC68Q9H2F9 MIR376A1-201ENST00000616574 68 ntBASIC1.1□□□□□ -2.23
CCDC68Q9H2F9 AC090574.1-201ENST00000623186 233 ntBASIC1.1□□□□□ -2.23
CCDC68Q9H2F9 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.09□□□□□ -2.23
CCDC68Q9H2F9 MIR103A2-201ENST00000362154 78 ntBASIC1.09□□□□□ -2.23
CCDC68Q9H2F9 SNORA25.3-201ENST00000363205 127 ntBASIC1.09□□□□□ -2.23
CCDC68Q9H2F9 Y_RNA.796-201ENST00000364268 102 ntBASIC1.09□□□□□ -2.23
CCDC68Q9H2F9 RNU6-1187P-201ENST00000364771 110 ntBASIC1.09□□□□□ -2.23
CCDC68Q9H2F9 Y_RNA.799-201ENST00000364992 102 ntBASIC1.09□□□□□ -2.23
CCDC68Q9H2F9 Y_RNA.327-201ENST00000365201 102 ntBASIC1.09□□□□□ -2.23
CCDC68Q9H2F9 Y_RNA.330-201ENST00000365230 109 ntBASIC1.09□□□□□ -2.23
CCDC68Q9H2F9 SNORA63.7-201ENST00000365579 123 ntBASIC1.09□□□□□ -2.23
CCDC68Q9H2F9 SNORD38C-201ENST00000384381 69 ntBASIC1.09□□□□□ -2.23
CCDC68Q9H2F9 Y_RNA.602-201ENST00000410535 92 ntBASIC1.09□□□□□ -2.23
CCDC68Q9H2F9 MIR4295-201ENST00000585286 85 ntBASIC1.09□□□□□ -2.23
CCDC68Q9H2F9 RNU6-442P-201ENST00000383968 104 ntBASIC1.08□□□□□ -2.24
CCDC68Q9H2F9 MIR942-201ENST00000401111 86 ntBASIC1.08□□□□□ -2.24
CCDC68Q9H2F9 RNU6-321P-201ENST00000410912 106 ntBASIC1.08□□□□□ -2.24
CCDC68Q9H2F9 RNU2-14P-201ENST00000411053 191 ntBASIC1.08□□□□□ -2.24
CCDC68Q9H2F9 Y_RNA.715-201ENST00000517082 110 ntBASIC1.08□□□□□ -2.24
CCDC68Q9H2F9 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC1.08□□□□□ -2.24
CCDC68Q9H2F9 AC103810.9-201ENST00000606688 112 ntBASIC1.08□□□□□ -2.24
CCDC68Q9H2F9 RNU6-801P-201ENST00000364087 105 ntBASIC1.07□□□□□ -2.24
CCDC68Q9H2F9 SNORA72.4-201ENST00000384174 132 ntBASIC1.07□□□□□ -2.24
CCDC68Q9H2F9 Y_RNA.645-201ENST00000391229 102 ntBASIC1.07□□□□□ -2.24
CCDC68Q9H2F9 RNU6-101P-201ENST00000410323 104 ntBASIC1.07□□□□□ -2.24
CCDC68Q9H2F9 AC087343.1-201ENST00000477341 475 ntBASIC1.07□□□□□ -2.24
CCDC68Q9H2F9 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC1.07□□□□□ -2.24
CCDC68Q9H2F9 PDCD5P2-201ENST00000507570 312 ntBASIC1.07□□□□□ -2.24
CCDC68Q9H2F9 RPL23AP91-201ENST00000569211 455 ntBASIC1.07□□□□□ -2.24
CCDC68Q9H2F9 MIR4300-201ENST00000581016 96 ntBASIC1.07□□□□□ -2.24
CCDC68Q9H2F9 Y_RNA.148-201ENST00000363557 117 ntBASIC1.06□□□□□ -2.24
CCDC68Q9H2F9 Y_RNA.183-201ENST00000363882 113 ntBASIC1.06□□□□□ -2.24
CCDC68Q9H2F9 RNA5SP48-201ENST00000363969 126 ntBASIC1.06□□□□□ -2.24
CCDC68Q9H2F9 RNU6-450P-201ENST00000364654 107 ntBASIC1.06□□□□□ -2.24
CCDC68Q9H2F9 Y_RNA.389-201ENST00000383924 113 ntBASIC1.06□□□□□ -2.24
CCDC68Q9H2F9 Y_RNA.509-201ENST00000384506 99 ntBASIC1.06□□□□□ -2.24
CCDC68Q9H2F9 RNU6-823P-201ENST00000391042 103 ntBASIC1.06□□□□□ -2.24
CCDC68Q9H2F9 MIR1278-201ENST00000408753 81 ntBASIC1.06□□□□□ -2.24
CCDC68Q9H2F9 PMCHL1-202ENST00000423102 261 ntBASIC1.06□□□□□ -2.24
CCDC68Q9H2F9 NDUFA4P2-201ENST00000489989 244 ntBASIC1.06□□□□□ -2.24
CCDC68Q9H2F9 AC005840.1-201ENST00000498412 377 ntBASIC1.06□□□□□ -2.24
CCDC68Q9H2F9 RNU6-1007P-201ENST00000516586 107 ntBASIC1.06□□□□□ -2.24
CCDC68Q9H2F9 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC1.06□□□□□ -2.24
CCDC68Q9H2F9 AL160413.1-201ENST00000622780 310 ntBASIC1.06□□□□□ -2.24
CCDC68Q9H2F9 AC134026.1-201ENST00000623249 2239 ntBASIC1.05□□□□□ -2.24
CCDC68Q9H2F9 MTCO2P33-201ENST00000402100 465 ntBASIC1.05□□□□□ -2.24
CCDC68Q9H2F9 RNU6-191P-201ENST00000516295 94 ntBASIC1.05□□□□□ -2.24
CCDC68Q9H2F9 RNU6-897P-201ENST00000517135 105 ntBASIC1.05□□□□□ -2.24
CCDC68Q9H2F9 Y_RNA.721-201ENST00000517207 102 ntBASIC1.05□□□□□ -2.24
CCDC68Q9H2F9 RNU6-988P-201ENST00000519081 107 ntBASIC1.05□□□□□ -2.24
CCDC68Q9H2F9 MIR4781-201ENST00000585250 76 ntBASIC1.05□□□□□ -2.24
CCDC68Q9H2F9 AC005357.1-201ENST00000588399 301 ntBASIC1.05□□□□□ -2.24
CCDC68Q9H2F9 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.05□□□□□ -2.24
CCDC68Q9H2F9 Y_RNA.28-201ENST00000362554 111 ntBASIC1.04□□□□□ -2.24
CCDC68Q9H2F9 RNU4-90P-201ENST00000362773 141 ntBASIC1.04□□□□□ -2.24
CCDC68Q9H2F9 RNU6-674P-201ENST00000363831 107 ntBASIC1.04□□□□□ -2.24
CCDC68Q9H2F9 Y_RNA.222-201ENST00000364264 102 ntBASIC1.04□□□□□ -2.24
CCDC68Q9H2F9 RNU6-392P-201ENST00000364926 101 ntBASIC1.04□□□□□ -2.24
CCDC68Q9H2F9 Y_RNA.418-201ENST00000384029 102 ntBASIC1.04□□□□□ -2.24
CCDC68Q9H2F9 Y_RNA.460-201ENST00000384255 102 ntBASIC1.04□□□□□ -2.24
CCDC68Q9H2F9 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC1.04□□□□□ -2.24
CCDC68Q9H2F9 SNORA26.5-201ENST00000391215 123 ntBASIC1.04□□□□□ -2.24
CCDC68Q9H2F9 RPL39P28-201ENST00000465655 155 ntBASIC1.04□□□□□ -2.24
CCDC68Q9H2F9 Y_RNA.676-201ENST00000516393 96 ntBASIC1.04□□□□□ -2.24
CCDC68Q9H2F9 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC1.04□□□□□ -2.24
CCDC68Q9H2F9 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.04□□□□□ -2.24
CCDC68Q9H2F9 AC104695.3-201ENST00000604052 296 ntBASIC1.04□□□□□ -2.24
CCDC68Q9H2F9 RAC1P9-201ENST00000604990 392 ntBASIC1.04□□□□□ -2.24
CCDC68Q9H2F9 AL020996.3-201ENST00000606617 222 ntBASIC1.04□□□□□ -2.24
CCDC68Q9H2F9 SEPT14P17-201ENST00000617978 177 ntBASIC1.04□□□□□ -2.24
CCDC68Q9H2F9 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.04□□□□□ -2.24
CCDC68Q9H2F9 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.04□□□□□ -2.24
CCDC68Q9H2F9 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
CCDC68Q9H2F9 Y_RNA.4-201ENST00000362333 112 ntBASIC1.03□□□□□ -2.24
CCDC68Q9H2F9 RNU6-102P-201ENST00000384485 104 ntBASIC1.03□□□□□ -2.24
CCDC68Q9H2F9 Y_RNA.569-201ENST00000384749 103 ntBASIC1.03□□□□□ -2.24
CCDC68Q9H2F9 SNORD115-46-201ENST00000390982 71 ntBASIC1.03□□□□□ -2.24
CCDC68Q9H2F9 MIR1185-1-201ENST00000408598 86 ntBASIC1.03□□□□□ -2.24
CCDC68Q9H2F9 MIR1252-201ENST00000408861 65 ntBASIC1.03□□□□□ -2.24
CCDC68Q9H2F9 POLR2J4-204ENST00000418424 324 ntBASIC1.03□□□□□ -2.24
CCDC68Q9H2F9 HSPE1P25-201ENST00000455484 251 ntBASIC1.03□□□□□ -2.24
CCDC68Q9H2F9 Y_RNA.631-201ENST00000459607 101 ntBASIC1.03□□□□□ -2.24
CCDC68Q9H2F9 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.03□□□□□ -2.24
CCDC68Q9H2F9 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.03□□□□□ -2.24
CCDC68Q9H2F9 ACA64.5-201ENST00000516207 127 ntBASIC1.03□□□□□ -2.24
CCDC68Q9H2F9 AP003716.2-201ENST00000528260 108 ntBASIC1.03□□□□□ -2.24
CCDC68Q9H2F9 MIR548AR-201ENST00000582191 57 ntBASIC1.03□□□□□ -2.24
CCDC68Q9H2F9 AC008507.4-201ENST00000585464 127 ntBASIC1.03□□□□□ -2.24
CCDC68Q9H2F9 C8orf59P2-201ENST00000603441 271 ntBASIC1.03□□□□□ -2.24
CCDC68Q9H2F9 SNORD114-21-201ENST00000606412 72 ntBASIC1.03□□□□□ -2.24
CCDC68Q9H2F9 Pinc.1-201ENST00000616452 154 ntBASIC1.03□□□□□ -2.24
CCDC68Q9H2F9 RNU6-899P-201ENST00000363947 107 ntBASIC1.02□□□□□ -2.25
CCDC68Q9H2F9 RNU6-474P-201ENST00000384243 107 ntBASIC1.02□□□□□ -2.25
CCDC68Q9H2F9 RNU6-496P-201ENST00000516145 99 ntBASIC1.02□□□□□ -2.25
CCDC68Q9H2F9 RNU6-764P-201ENST00000516396 105 ntBASIC1.02□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 493.9 ms