Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 AL442128.1-201ENST00000615151 90 ntBASIC2.55□□□□□ -2
VPS11Q9H270 MIR376A2-201ENST00000636782 80 ntBASIC2.55□□□□□ -2
VPS11Q9H270 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
VPS11Q9H270 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.54□□□□□ -2
VPS11Q9H270 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.54□□□□□ -2
VPS11Q9H270 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.54□□□□□ -2
VPS11Q9H270 RNU1-22P-201ENST00000363334 158 ntBASIC2.54□□□□□ -2
VPS11Q9H270 SNORA63.5-201ENST00000363548 123 ntBASIC2.54□□□□□ -2
VPS11Q9H270 HMGN2P39-201ENST00000398005 273 ntBASIC2.54□□□□□ -2
VPS11Q9H270 MIR1302-5-201ENST00000408164 150 ntBASIC2.54□□□□□ -2
VPS11Q9H270 RNA5SP136-201ENST00000410906 107 ntBASIC2.54□□□□□ -2
VPS11Q9H270 AC063976.3-201ENST00000426849 329 ntBASIC2.54□□□□□ -2
VPS11Q9H270 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.54□□□□□ -2
VPS11Q9H270 AC018634.1-201ENST00000437554 401 ntBASIC2.54□□□□□ -2
VPS11Q9H270 MTATP6P21-201ENST00000440681 189 ntBASIC2.54□□□□□ -2
VPS11Q9H270 COX6CP6-201ENST00000490840 228 ntBASIC2.54□□□□□ -2
VPS11Q9H270 RNA5SP281-201ENST00000516504 135 ntBASIC2.54□□□□□ -2
VPS11Q9H270 SCARNA15-202ENST00000516881 127 ntBASIC2.54□□□□□ -2
VPS11Q9H270 MIR4753-201ENST00000585119 83 ntBASIC2.54□□□□□ -2
VPS11Q9H270 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC2.54□□□□□ -2
VPS11Q9H270 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.54□□□□□ -2
VPS11Q9H270 AC006386.2-201ENST00000624491 75 ntBASIC2.54□□□□□ -2
VPS11Q9H270 AC012005.1-201ENST00000624575 75 ntBASIC2.54□□□□□ -2
VPS11Q9H270 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.54□□□□□ -2
VPS11Q9H270 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
VPS11Q9H270 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
VPS11Q9H270 MIR548A2-201ENST00000384956 97 ntBASIC2.53□□□□□ -2
VPS11Q9H270 MT-TI-201ENST00000387365 69 ntBASIC2.53□□□□□ -2
VPS11Q9H270 SNORA26-201ENST00000391286 122 ntBASIC2.53□□□□□ -2
VPS11Q9H270 COTL1P1-201ENST00000422309 375 ntBASIC2.53□□□□□ -2
VPS11Q9H270 RN7SKP12-201ENST00000516275 143 ntBASIC2.53□□□□□ -2
VPS11Q9H270 RNU6-1149P-201ENST00000516810 97 ntBASIC2.53□□□□□ -2
VPS11Q9H270 MIR2681-201ENST00000581814 105 ntBASIC2.53□□□□□ -2
VPS11Q9H270 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.53□□□□□ -2
VPS11Q9H270 MIR6895-201ENST00000613497 78 ntBASIC2.53□□□□□ -2
VPS11Q9H270 AL137790.1-201ENST00000634283 177 ntBASIC2.53□□□□□ -2
VPS11Q9H270 MIR203B-201ENST00000636080 86 ntBASIC2.53□□□□□ -2
VPS11Q9H270 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
VPS11Q9H270 RNU6-418P-201ENST00000384035 107 ntBASIC2.52□□□□□ -2.01
VPS11Q9H270 SNORD61-201ENST00000384252 73 ntBASIC2.52□□□□□ -2.01
VPS11Q9H270 MIR9-1-201ENST00000385198 89 ntBASIC2.52□□□□□ -2.01
VPS11Q9H270 AL117342.1-201ENST00000404861 406 ntBASIC2.52□□□□□ -2.01
VPS11Q9H270 RPS27P22-201ENST00000478056 241 ntBASIC2.52□□□□□ -2.01
VPS11Q9H270 MRPS17P9-201ENST00000511924 393 ntBASIC2.52□□□□□ -2.01
VPS11Q9H270 AC097462.1-201ENST00000514125 324 ntBASIC2.52□□□□□ -2.01
VPS11Q9H270 AC096725.1-201ENST00000514266 313 ntBASIC2.52□□□□□ -2.01
VPS11Q9H270 RNU6ATAC17P-201ENST00000516074 71 ntBASIC2.52□□□□□ -2.01
VPS11Q9H270 RNU7-193P-201ENST00000516723 65 ntBASIC2.52□□□□□ -2.01
VPS11Q9H270 SNORA31.25-201ENST00000517242 134 ntBASIC2.52□□□□□ -2.01
VPS11Q9H270 IGHVIII-67-2-201ENST00000519849 88 ntBASIC2.52□□□□□ -2.01
VPS11Q9H270 AC011604.1-201ENST00000545978 196 ntBASIC2.52□□□□□ -2.01
VPS11Q9H270 AL137067.1-201ENST00000615933 120 ntBASIC2.52□□□□□ -2.01
VPS11Q9H270 U6.73-201ENST00000619194 103 ntBASIC2.52□□□□□ -2.01
VPS11Q9H270 AC006435.5-201ENST00000624486 112 ntBASIC2.52□□□□□ -2.01
VPS11Q9H270 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC2.52□□□□□ -2.01
VPS11Q9H270 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.52□□□□□ -2.01
VPS11Q9H270 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
VPS11Q9H270 RNA5SP456-201ENST00000364002 114 ntBASIC2.51□□□□□ -2.01
VPS11Q9H270 Y_RNA.362-201ENST00000365518 110 ntBASIC2.51□□□□□ -2.01
VPS11Q9H270 RNU6-1292P-201ENST00000383856 107 ntBASIC2.51□□□□□ -2.01
VPS11Q9H270 RNU6-160P-201ENST00000384591 107 ntBASIC2.51□□□□□ -2.01
VPS11Q9H270 Y_RNA.544-201ENST00000384650 113 ntBASIC2.51□□□□□ -2.01
VPS11Q9H270 MIR144-201ENST00000384886 86 ntBASIC2.51□□□□□ -2.01
VPS11Q9H270 RNU6-1270P-201ENST00000517128 108 ntBASIC2.51□□□□□ -2.01
VPS11Q9H270 MIR4662B-201ENST00000579498 81 ntBASIC2.51□□□□□ -2.01
VPS11Q9H270 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC2.51□□□□□ -2.01
VPS11Q9H270 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
VPS11Q9H270 MIR518A2-201ENST00000384966 87 ntBASIC2.5□□□□□ -2.01
VPS11Q9H270 SNORD77.3-201ENST00000391113 65 ntBASIC2.5□□□□□ -2.01
VPS11Q9H270 AC023449.1-201ENST00000454464 154 ntBASIC2.5□□□□□ -2.01
VPS11Q9H270 RNU1-131P-201ENST00000458943 161 ntBASIC2.5□□□□□ -2.01
VPS11Q9H270 AP001486.1-201ENST00000463339 476 ntBASIC2.5□□□□□ -2.01
VPS11Q9H270 AC011406.1-201ENST00000512440 370 ntBASIC2.5□□□□□ -2.01
VPS11Q9H270 RNU6-830P-201ENST00000516353 107 ntBASIC2.5□□□□□ -2.01
VPS11Q9H270 RNU6-113P-201ENST00000516653 101 ntBASIC2.5□□□□□ -2.01
VPS11Q9H270 EIF4BP1-201ENST00000554881 351 ntBASIC2.5□□□□□ -2.01
VPS11Q9H270 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
VPS11Q9H270 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.5□□□□□ -2.01
VPS11Q9H270 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC2.5□□□□□ -2.01
VPS11Q9H270 RNU6-888P-201ENST00000363010 101 ntBASIC2.49□□□□□ -2.01
VPS11Q9H270 SNORD115-3-201ENST00000363100 82 ntBASIC2.49□□□□□ -2.01
VPS11Q9H270 RNU6-1235P-201ENST00000384559 107 ntBASIC2.49□□□□□ -2.01
VPS11Q9H270 RNU6-1152P-201ENST00000384576 107 ntBASIC2.49□□□□□ -2.01
VPS11Q9H270 SNORD23.1-201ENST00000408212 104 ntBASIC2.49□□□□□ -2.01
VPS11Q9H270 MTATP8P2-201ENST00000435212 202 ntBASIC2.49□□□□□ -2.01
VPS11Q9H270 AC105272.1-201ENST00000438604 198 ntBASIC2.49□□□□□ -2.01
VPS11Q9H270 AC025750.2-201ENST00000442609 450 ntBASIC2.49□□□□□ -2.01
VPS11Q9H270 RNU6-498P-201ENST00000459468 107 ntBASIC2.49□□□□□ -2.01
VPS11Q9H270 RNU6-240P-201ENST00000516098 97 ntBASIC2.49□□□□□ -2.01
VPS11Q9H270 SNORA31.11-201ENST00000516528 139 ntBASIC2.49□□□□□ -2.01
VPS11Q9H270 RNU2-34P-201ENST00000516534 121 ntBASIC2.49□□□□□ -2.01
VPS11Q9H270 RNU6-504P-201ENST00000516568 104 ntBASIC2.49□□□□□ -2.01
VPS11Q9H270 IGLV3-17-201ENST00000519099 244 ntBASIC2.49□□□□□ -2.01
VPS11Q9H270 MIR4529-201ENST00000578110 78 ntBASIC2.49□□□□□ -2.01
VPS11Q9H270 AC013412.1-201ENST00000610687 192 ntBASIC2.49□□□□□ -2.01
VPS11Q9H270 AL589743.1-201ENST00000551932 2712 ntBASIC2.48□□□□□ -2.01
VPS11Q9H270 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
VPS11Q9H270 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
VPS11Q9H270 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.48□□□□□ -2.01
VPS11Q9H270 MIR340-201ENST00000362125 95 ntBASIC2.48□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 189.1 ms