Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 Y_RNA.176-201ENST00000363815 109 ntBASIC0.96□□□□□ -2.26
RSPO3Q9BXY4 SNORA25.8-201ENST00000364831 128 ntBASIC0.96□□□□□ -2.26
RSPO3Q9BXY4 RNU6-662P-201ENST00000384253 104 ntBASIC0.96□□□□□ -2.26
RSPO3Q9BXY4 RNU6-376P-201ENST00000384731 106 ntBASIC0.96□□□□□ -2.26
RSPO3Q9BXY4 MIR520E-201ENST00000384867 87 ntBASIC0.96□□□□□ -2.26
RSPO3Q9BXY4 MIR194-1-201ENST00000384892 85 ntBASIC0.96□□□□□ -2.26
RSPO3Q9BXY4 RNU6-360P-201ENST00000390944 104 ntBASIC0.96□□□□□ -2.26
RSPO3Q9BXY4 RNU2-7P-201ENST00000410794 178 ntBASIC0.96□□□□□ -2.26
RSPO3Q9BXY4 AL161935.2-201ENST00000414627 60 ntBASIC0.96□□□□□ -2.26
RSPO3Q9BXY4 AC245047.3-201ENST00000429428 127 ntBASIC0.96□□□□□ -2.26
RSPO3Q9BXY4 MTCYBP9-201ENST00000431021 303 ntBASIC0.96□□□□□ -2.26
RSPO3Q9BXY4 RPS29P28-201ENST00000446439 141 ntBASIC0.96□□□□□ -2.26
RSPO3Q9BXY4 U8.19-201ENST00000459095 133 ntBASIC0.96□□□□□ -2.26
RSPO3Q9BXY4 TRBVB-201ENST00000477100 408 ntBASIC0.96□□□□□ -2.26
RSPO3Q9BXY4 AC117454.1-201ENST00000491120 168 ntBASIC0.96□□□□□ -2.26
RSPO3Q9BXY4 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC0.96□□□□□ -2.26
RSPO3Q9BXY4 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC0.96□□□□□ -2.26
RSPO3Q9BXY4 MTND1P19-201ENST00000511780 315 ntBASIC0.96□□□□□ -2.26
RSPO3Q9BXY4 SNORA70.12-201ENST00000516084 153 ntBASIC0.96□□□□□ -2.26
RSPO3Q9BXY4 RNU6-341P-201ENST00000516973 96 ntBASIC0.96□□□□□ -2.26
RSPO3Q9BXY4 RNU6-1096P-201ENST00000517089 102 ntBASIC0.96□□□□□ -2.26
RSPO3Q9BXY4 AC136628.3-201ENST00000521868 290 ntBASIC0.96□□□□□ -2.26
RSPO3Q9BXY4 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC0.96□□□□□ -2.26
RSPO3Q9BXY4 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC0.96□□□□□ -2.26
RSPO3Q9BXY4 AC005972.2-201ENST00000604690 348 ntBASIC0.96□□□□□ -2.26
RSPO3Q9BXY4 AL121890.5-201ENST00000620848 304 ntBASIC0.96□□□□□ -2.26
RSPO3Q9BXY4 PVT1_3.1-201ENST00000620853 95 ntBASIC0.96□□□□□ -2.26
RSPO3Q9BXY4 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC0.96□□□□□ -2.26
RSPO3Q9BXY4 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC0.95□□□□□ -2.26
RSPO3Q9BXY4 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.95□□□□□ -2.26
RSPO3Q9BXY4 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.95□□□□□ -2.26
RSPO3Q9BXY4 Y_RNA.36-201ENST00000362602 112 ntBASIC0.95□□□□□ -2.26
RSPO3Q9BXY4 SNORD114-27-201ENST00000363766 70 ntBASIC0.95□□□□□ -2.26
RSPO3Q9BXY4 RNU4-41P-201ENST00000364426 143 ntBASIC0.95□□□□□ -2.26
RSPO3Q9BXY4 RNU6-326P-201ENST00000365480 107 ntBASIC0.95□□□□□ -2.26
RSPO3Q9BXY4 Y_RNA.456-201ENST00000384232 111 ntBASIC0.95□□□□□ -2.26
RSPO3Q9BXY4 Y_RNA.461-201ENST00000384263 103 ntBASIC0.95□□□□□ -2.26
RSPO3Q9BXY4 RNU6-1031P-201ENST00000384773 107 ntBASIC0.95□□□□□ -2.26
RSPO3Q9BXY4 RNU6-763P-201ENST00000390865 106 ntBASIC0.95□□□□□ -2.26
RSPO3Q9BXY4 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC0.95□□□□□ -2.26
RSPO3Q9BXY4 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC0.95□□□□□ -2.26
RSPO3Q9BXY4 MTND3P2-201ENST00000438452 342 ntBASIC0.95□□□□□ -2.26
RSPO3Q9BXY4 AC104332.1-201ENST00000440471 797 ntBASIC0.95□□□□□ -2.26
RSPO3Q9BXY4 AC233266.1-201ENST00000454518 96 ntBASIC0.95□□□□□ -2.26
RSPO3Q9BXY4 snoU13.27-201ENST00000459278 104 ntBASIC0.95□□□□□ -2.26
RSPO3Q9BXY4 RNU7-141P-201ENST00000459304 62 ntBASIC0.95□□□□□ -2.26
RSPO3Q9BXY4 AC092991.1-201ENST00000477176 376 ntBASIC0.95□□□□□ -2.26
RSPO3Q9BXY4 RPL30P7-201ENST00000479312 323 ntBASIC0.95□□□□□ -2.26
RSPO3Q9BXY4 AC091959.1-201ENST00000495857 238 ntBASIC0.95□□□□□ -2.26
RSPO3Q9BXY4 SERF1AP1-201ENST00000514575 187 ntBASIC0.95□□□□□ -2.26
RSPO3Q9BXY4 RNU6-1278P-201ENST00000516130 107 ntBASIC0.95□□□□□ -2.26
RSPO3Q9BXY4 RNU2-31P-201ENST00000516954 155 ntBASIC0.95□□□□□ -2.26
RSPO3Q9BXY4 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC0.95□□□□□ -2.26
RSPO3Q9BXY4 MIR4643-201ENST00000577473 78 ntBASIC0.95□□□□□ -2.26
RSPO3Q9BXY4 MIR4503-201ENST00000582187 83 ntBASIC0.95□□□□□ -2.26
RSPO3Q9BXY4 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC0.95□□□□□ -2.26
RSPO3Q9BXY4 AC242852.1-201ENST00000612151 96 ntBASIC0.95□□□□□ -2.26
RSPO3Q9BXY4 AC021506.2-201ENST00000612354 169 ntBASIC0.95□□□□□ -2.26
RSPO3Q9BXY4 AC244015.1-201ENST00000622301 99 ntBASIC0.95□□□□□ -2.26
RSPO3Q9BXY4 AC068647.2-201ENST00000637380 353 ntBASIC0.95□□□□□ -2.26
RSPO3Q9BXY4 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC0.95□□□□□ -2.26
RSPO3Q9BXY4 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC0.94□□□□□ -2.26
RSPO3Q9BXY4 AC100821.1-201ENST00000523153 2479 ntBASIC0.94□□□□□ -2.26
RSPO3Q9BXY4 MIRLET7C-201ENST00000362160 84 ntBASIC0.94□□□□□ -2.26
RSPO3Q9BXY4 Y_RNA.117-201ENST00000363294 101 ntBASIC0.94□□□□□ -2.26
RSPO3Q9BXY4 Y_RNA.217-201ENST00000364214 105 ntBASIC0.94□□□□□ -2.26
RSPO3Q9BXY4 SNORA70.7-201ENST00000384159 133 ntBASIC0.94□□□□□ -2.26
RSPO3Q9BXY4 SNORA72.4-201ENST00000384174 132 ntBASIC0.94□□□□□ -2.26
RSPO3Q9BXY4 Y_RNA.518-201ENST00000384552 113 ntBASIC0.94□□□□□ -2.26
RSPO3Q9BXY4 RNU6ATAC19P-201ENST00000408096 110 ntBASIC0.94□□□□□ -2.26
RSPO3Q9BXY4 RNU6-710P-201ENST00000410424 105 ntBASIC0.94□□□□□ -2.26
RSPO3Q9BXY4 AC069257.2-201ENST00000441819 155 ntBASIC0.94□□□□□ -2.26
RSPO3Q9BXY4 Y_RNA.641-201ENST00000459414 105 ntBASIC0.94□□□□□ -2.26
RSPO3Q9BXY4 OR9P1P-201ENST00000496431 281 ntBASIC0.94□□□□□ -2.26
RSPO3Q9BXY4 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC0.94□□□□□ -2.26
RSPO3Q9BXY4 AC024405.2-202ENST00000532731 184 ntBASIC0.94□□□□□ -2.26
RSPO3Q9BXY4 AC012433.1-201ENST00000588916 398 ntBASIC0.94□□□□□ -2.26
RSPO3Q9BXY4 HSPE1P19-201ENST00000603327 295 ntBASIC0.94□□□□□ -2.26
RSPO3Q9BXY4 snoU18.1-201ENST00000629629 71 ntBASIC0.94□□□□□ -2.26
RSPO3Q9BXY4 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC0.94□□□□□ -2.26
RSPO3Q9BXY4 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.93□□□□□ -2.26
RSPO3Q9BXY4 Y_RNA.149-201ENST00000363558 117 ntBASIC0.93□□□□□ -2.26
RSPO3Q9BXY4 Y_RNA.193-201ENST00000363979 102 ntBASIC0.93□□□□□ -2.26
RSPO3Q9BXY4 RNU4-38P-201ENST00000364472 129 ntBASIC0.93□□□□□ -2.26
RSPO3Q9BXY4 RNU6-1323P-201ENST00000384025 107 ntBASIC0.93□□□□□ -2.26
RSPO3Q9BXY4 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC0.93□□□□□ -2.26
RSPO3Q9BXY4 MIR1302-6-201ENST00000408466 90 ntBASIC0.93□□□□□ -2.26
RSPO3Q9BXY4 MIR1278-201ENST00000408753 81 ntBASIC0.93□□□□□ -2.26
RSPO3Q9BXY4 MIR548J-201ENST00000408833 112 ntBASIC0.93□□□□□ -2.26
RSPO3Q9BXY4 RNU2-38P-201ENST00000410856 79 ntBASIC0.93□□□□□ -2.26
RSPO3Q9BXY4 STAG3L5P-204ENST00000443759 179 ntBASIC0.93□□□□□ -2.26
RSPO3Q9BXY4 SNORD127-201ENST00000458892 86 ntBASIC0.93□□□□□ -2.26
RSPO3Q9BXY4 AL049830.1-201ENST00000468034 425 ntBASIC0.93□□□□□ -2.26
RSPO3Q9BXY4 AC087343.1-201ENST00000477341 475 ntBASIC0.93□□□□□ -2.26
RSPO3Q9BXY4 RNU7-115P-201ENST00000516433 55 ntBASIC0.93□□□□□ -2.26
RSPO3Q9BXY4 Y_RNA.680-201ENST00000516441 93 ntBASIC0.93□□□□□ -2.26
RSPO3Q9BXY4 SNORA27.4-201ENST00000516650 95 ntBASIC0.93□□□□□ -2.26
RSPO3Q9BXY4 RNU6-113P-201ENST00000516653 101 ntBASIC0.93□□□□□ -2.26
RSPO3Q9BXY4 RNA5SP481-201ENST00000516814 122 ntBASIC0.93□□□□□ -2.26
RSPO3Q9BXY4 RNU6-1116P-201ENST00000517269 99 ntBASIC0.93□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 147.3 ms