Protein–RNA interactions for Protein: Q9BSE4

HERPUD2, Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 2 protein, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2Q9BSE4 SNORD81.1-201ENST00000363064 77 ntBASIC1.71□□□□□ -2.14
HERPUD2Q9BSE4 RNU4-41P-201ENST00000364426 143 ntBASIC1.71□□□□□ -2.14
HERPUD2Q9BSE4 Y_RNA.297-201ENST00000364950 91 ntBASIC1.71□□□□□ -2.14
HERPUD2Q9BSE4 RNY4P28-201ENST00000365281 93 ntBASIC1.71□□□□□ -2.14
HERPUD2Q9BSE4 Y_RNA.352-201ENST00000365439 102 ntBASIC1.71□□□□□ -2.14
HERPUD2Q9BSE4 RNU6-1080P-201ENST00000383982 107 ntBASIC1.71□□□□□ -2.14
HERPUD2Q9BSE4 Y_RNA.506-201ENST00000384494 102 ntBASIC1.71□□□□□ -2.14
HERPUD2Q9BSE4 AL627390.1-201ENST00000396055 340 ntBASIC1.71□□□□□ -2.14
HERPUD2Q9BSE4 RN7SKP51-201ENST00000410781 304 ntBASIC1.71□□□□□ -2.14
HERPUD2Q9BSE4 AC022559.1-201ENST00000520905 205 ntBASIC1.71□□□□□ -2.14
HERPUD2Q9BSE4 AC011604.1-201ENST00000545978 196 ntBASIC1.71□□□□□ -2.14
HERPUD2Q9BSE4 MIR502-201ENST00000606349 86 ntBASIC1.71□□□□□ -2.14
HERPUD2Q9BSE4 MIR376A1-201ENST00000616574 68 ntBASIC1.71□□□□□ -2.14
HERPUD2Q9BSE4 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC1.71□□□□□ -2.14
HERPUD2Q9BSE4 SNORD113-8-201ENST00000363497 74 ntBASIC1.7□□□□□ -2.14
HERPUD2Q9BSE4 RNA5SP99-201ENST00000364020 114 ntBASIC1.7□□□□□ -2.14
HERPUD2Q9BSE4 Y_RNA.341-201ENST00000365341 102 ntBASIC1.7□□□□□ -2.14
HERPUD2Q9BSE4 Y_RNA.515-201ENST00000384535 112 ntBASIC1.7□□□□□ -2.14
HERPUD2Q9BSE4 SNORA19-201ENST00000384737 128 ntBASIC1.7□□□□□ -2.14
HERPUD2Q9BSE4 RNU4-30P-201ENST00000410245 143 ntBASIC1.7□□□□□ -2.14
HERPUD2Q9BSE4 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.7□□□□□ -2.14
HERPUD2Q9BSE4 RPS20P10-201ENST00000451209 253 ntBASIC1.7□□□□□ -2.14
HERPUD2Q9BSE4 RPL30P7-201ENST00000479312 323 ntBASIC1.7□□□□□ -2.14
HERPUD2Q9BSE4 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
HERPUD2Q9BSE4 SNORD116-28-201ENST00000516123 91 ntBASIC1.7□□□□□ -2.14
HERPUD2Q9BSE4 Y_RNA.700-201ENST00000516806 100 ntBASIC1.7□□□□□ -2.14
HERPUD2Q9BSE4 SCARNA24.2-201ENST00000516968 130 ntBASIC1.7□□□□□ -2.14
HERPUD2Q9BSE4 MIR3910-1-201ENST00000580936 111 ntBASIC1.7□□□□□ -2.14
HERPUD2Q9BSE4 MIR4282-201ENST00000583613 67 ntBASIC1.7□□□□□ -2.14
HERPUD2Q9BSE4 AC004832.4-201ENST00000608952 331 ntBASIC1.7□□□□□ -2.14
HERPUD2Q9BSE4 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
HERPUD2Q9BSE4 Y_RNA.29-201ENST00000362570 113 ntBASIC1.69□□□□□ -2.14
HERPUD2Q9BSE4 RNU1-17P-201ENST00000363022 152 ntBASIC1.69□□□□□ -2.14
HERPUD2Q9BSE4 SNORD68-201ENST00000363214 84 ntBASIC1.69□□□□□ -2.14
HERPUD2Q9BSE4 Y_RNA.122-201ENST00000363331 96 ntBASIC1.69□□□□□ -2.14
HERPUD2Q9BSE4 Y_RNA.172-201ENST00000363765 102 ntBASIC1.69□□□□□ -2.14
HERPUD2Q9BSE4 RNU6-740P-201ENST00000364734 105 ntBASIC1.69□□□□□ -2.14
HERPUD2Q9BSE4 RNA5SP190-201ENST00000365222 118 ntBASIC1.69□□□□□ -2.14
HERPUD2Q9BSE4 SNORD113-1-201ENST00000365321 69 ntBASIC1.69□□□□□ -2.14
HERPUD2Q9BSE4 RNU6-746P-201ENST00000384112 109 ntBASIC1.69□□□□□ -2.14
HERPUD2Q9BSE4 MIR548M-201ENST00000408260 86 ntBASIC1.69□□□□□ -2.14
HERPUD2Q9BSE4 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.69□□□□□ -2.14
HERPUD2Q9BSE4 MIR548H3-201ENST00000408771 118 ntBASIC1.69□□□□□ -2.14
HERPUD2Q9BSE4 MIR1298-201ENST00000408783 112 ntBASIC1.69□□□□□ -2.14
HERPUD2Q9BSE4 Y_RNA.602-201ENST00000410535 92 ntBASIC1.69□□□□□ -2.14
HERPUD2Q9BSE4 SEPT14P8-201ENST00000508026 178 ntBASIC1.69□□□□□ -2.14
HERPUD2Q9BSE4 AL512310.8-201ENST00000550183 120 ntBASIC1.69□□□□□ -2.14
HERPUD2Q9BSE4 MIR3133-201ENST00000583157 78 ntBASIC1.69□□□□□ -2.14
HERPUD2Q9BSE4 U2.14-201ENST00000615943 113 ntBASIC1.69□□□□□ -2.14
HERPUD2Q9BSE4 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
HERPUD2Q9BSE4 Y_RNA.200-201ENST00000364018 102 ntBASIC1.68□□□□□ -2.14
HERPUD2Q9BSE4 Y_RNA.418-201ENST00000384029 102 ntBASIC1.68□□□□□ -2.14
HERPUD2Q9BSE4 Y_RNA.464-201ENST00000384282 110 ntBASIC1.68□□□□□ -2.14
HERPUD2Q9BSE4 Y_RNA.626-201ENST00000411288 95 ntBASIC1.68□□□□□ -2.14
HERPUD2Q9BSE4 RN7SKP101-201ENST00000411376 320 ntBASIC1.68□□□□□ -2.14
HERPUD2Q9BSE4 U8.19-201ENST00000459095 133 ntBASIC1.68□□□□□ -2.14
HERPUD2Q9BSE4 RNU7-120P-201ENST00000459334 63 ntBASIC1.68□□□□□ -2.14
HERPUD2Q9BSE4 SERF1AP1-201ENST00000514575 187 ntBASIC1.68□□□□□ -2.14
HERPUD2Q9BSE4 RNU4-71P-201ENST00000516258 113 ntBASIC1.68□□□□□ -2.14
HERPUD2Q9BSE4 RNU6-182P-201ENST00000516970 105 ntBASIC1.68□□□□□ -2.14
HERPUD2Q9BSE4 DEFB117-201ENST00000602356 141 ntBASIC1.68□□□□□ -2.14
HERPUD2Q9BSE4 AL513534.2-201ENST00000603836 250 ntBASIC1.68□□□□□ -2.14
HERPUD2Q9BSE4 SNORD113-5-201ENST00000607261 78 ntBASIC1.68□□□□□ -2.14
HERPUD2Q9BSE4 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.67□□□□□ -2.14
HERPUD2Q9BSE4 AL161722.3-201ENST00000605789 2983 ntBASIC1.67□□□□□ -2.14
HERPUD2Q9BSE4 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.67□□□□□ -2.14
HERPUD2Q9BSE4 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
HERPUD2Q9BSE4 MIR411-201ENST00000362239 96 ntBASIC1.67□□□□□ -2.14
HERPUD2Q9BSE4 Y_RNA.54-201ENST00000362766 105 ntBASIC1.67□□□□□ -2.14
HERPUD2Q9BSE4 Y_RNA.170-201ENST00000363746 110 ntBASIC1.67□□□□□ -2.14
HERPUD2Q9BSE4 RNU6-163P-201ENST00000384396 106 ntBASIC1.67□□□□□ -2.14
HERPUD2Q9BSE4 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
HERPUD2Q9BSE4 RNU6-918P-201ENST00000391219 106 ntBASIC1.67□□□□□ -2.14
HERPUD2Q9BSE4 POLR2KP2-201ENST00000438155 177 ntBASIC1.67□□□□□ -2.14
HERPUD2Q9BSE4 AC093850.1-201ENST00000454121 251 ntBASIC1.67□□□□□ -2.14
HERPUD2Q9BSE4 Y_RNA.644-201ENST00000459006 113 ntBASIC1.67□□□□□ -2.14
HERPUD2Q9BSE4 AC092991.1-201ENST00000477176 376 ntBASIC1.67□□□□□ -2.14
HERPUD2Q9BSE4 RNU6-322P-201ENST00000516010 103 ntBASIC1.67□□□□□ -2.14
HERPUD2Q9BSE4 Y_RNA.674-201ENST00000516362 113 ntBASIC1.67□□□□□ -2.14
HERPUD2Q9BSE4 RN7SKP88-201ENST00000516847 250 ntBASIC1.67□□□□□ -2.14
HERPUD2Q9BSE4 BX284668.6-201ENST00000606899 438 ntBASIC1.67□□□□□ -2.14
HERPUD2Q9BSE4 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.67□□□□□ -2.14
HERPUD2Q9BSE4 7SK.8-201ENST00000612110 250 ntBASIC1.67□□□□□ -2.14
HERPUD2Q9BSE4 7SK.11-201ENST00000615477 250 ntBASIC1.67□□□□□ -2.14
HERPUD2Q9BSE4 7SK.13-201ENST00000622040 250 ntBASIC1.67□□□□□ -2.14
HERPUD2Q9BSE4 AC021753.1-201ENST00000635724 168 ntBASIC1.67□□□□□ -2.14
HERPUD2Q9BSE4 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
HERPUD2Q9BSE4 RNU6-457P-201ENST00000363999 107 ntBASIC1.66□□□□□ -2.14
HERPUD2Q9BSE4 RNU6-290P-201ENST00000365212 101 ntBASIC1.66□□□□□ -2.14
HERPUD2Q9BSE4 RNU6-662P-201ENST00000384253 104 ntBASIC1.66□□□□□ -2.14
HERPUD2Q9BSE4 RNU6-997P-201ENST00000384725 107 ntBASIC1.66□□□□□ -2.14
HERPUD2Q9BSE4 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
HERPUD2Q9BSE4 RNU6-346P-201ENST00000516288 111 ntBASIC1.66□□□□□ -2.14
HERPUD2Q9BSE4 RNY3P16-201ENST00000516338 101 ntBASIC1.66□□□□□ -2.14
HERPUD2Q9BSE4 RNU6-861P-201ENST00000516745 106 ntBASIC1.66□□□□□ -2.14
HERPUD2Q9BSE4 MTND5P41-201ENST00000517498 206 ntBASIC1.66□□□□□ -2.14
HERPUD2Q9BSE4 CYP3A52P-201ENST00000563326 91 ntBASIC1.66□□□□□ -2.14
HERPUD2Q9BSE4 MIR3664-201ENST00000579074 99 ntBASIC1.66□□□□□ -2.14
HERPUD2Q9BSE4 MIR8065-201ENST00000620577 100 ntBASIC1.66□□□□□ -2.14
HERPUD2Q9BSE4 AC068647.2-201ENST00000637380 353 ntBASIC1.66□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 203.3 ms