Protein–RNA interactions for Protein: Q9BRR0

ZKSCAN3, Zinc finger protein with KRAB and SCAN domains 3, humanhuman

Predictions only

Length 538 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZKSCAN3Q9BRR0 RNA5SP320-201ENST00000516263 124 ntBASIC3.01□□□□□ -1.93
ZKSCAN3Q9BRR0 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC3.01□□□□□ -1.93
ZKSCAN3Q9BRR0 MIR6733-201ENST00000635723 61 ntBASIC3.01□□□□□ -1.93
ZKSCAN3Q9BRR0 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
ZKSCAN3Q9BRR0 RNU6-1084P-201ENST00000362498 107 ntBASIC3□□□□□ -1.93
ZKSCAN3Q9BRR0 RNA5SP482-201ENST00000391269 118 ntBASIC3□□□□□ -1.93
ZKSCAN3Q9BRR0 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC3□□□□□ -1.93
ZKSCAN3Q9BRR0 MIR376A2-201ENST00000636782 80 ntBASIC3□□□□□ -1.93
ZKSCAN3Q9BRR0 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
ZKSCAN3Q9BRR0 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.99□□□□□ -1.93
ZKSCAN3Q9BRR0 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC2.99□□□□□ -1.93
ZKSCAN3Q9BRR0 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.99□□□□□ -1.93
ZKSCAN3Q9BRR0 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
ZKSCAN3Q9BRR0 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
ZKSCAN3Q9BRR0 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
ZKSCAN3Q9BRR0 RNU6-23P-201ENST00000363283 107 ntBASIC2.99□□□□□ -1.93
ZKSCAN3Q9BRR0 Y_RNA.116-201ENST00000363292 103 ntBASIC2.99□□□□□ -1.93
ZKSCAN3Q9BRR0 RNU6-1255P-201ENST00000363434 112 ntBASIC2.99□□□□□ -1.93
ZKSCAN3Q9BRR0 Y_RNA.281-201ENST00000364774 94 ntBASIC2.99□□□□□ -1.93
ZKSCAN3Q9BRR0 Y_RNA.366-201ENST00000365540 102 ntBASIC2.99□□□□□ -1.93
ZKSCAN3Q9BRR0 RNU6-1189P-201ENST00000383958 107 ntBASIC2.99□□□□□ -1.93
ZKSCAN3Q9BRR0 RPS26P48-201ENST00000491713 339 ntBASIC2.99□□□□□ -1.93
ZKSCAN3Q9BRR0 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC2.99□□□□□ -1.93
ZKSCAN3Q9BRR0 RNU7-28P-201ENST00000516759 62 ntBASIC2.99□□□□□ -1.93
ZKSCAN3Q9BRR0 AC026271.5-201ENST00000577873 130 ntBASIC2.99□□□□□ -1.93
ZKSCAN3Q9BRR0 MIR3169-201ENST00000578032 83 ntBASIC2.99□□□□□ -1.93
ZKSCAN3Q9BRR0 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.99□□□□□ -1.93
ZKSCAN3Q9BRR0 SNORD115-28-201ENST00000363931 81 ntBASIC2.98□□□□□ -1.93
ZKSCAN3Q9BRR0 Y_RNA.336-201ENST00000365307 109 ntBASIC2.98□□□□□ -1.93
ZKSCAN3Q9BRR0 RNU6-32P-201ENST00000383948 107 ntBASIC2.98□□□□□ -1.93
ZKSCAN3Q9BRR0 RNU6-13P-201ENST00000384248 107 ntBASIC2.98□□□□□ -1.93
ZKSCAN3Q9BRR0 RNU6-12P-201ENST00000384604 107 ntBASIC2.98□□□□□ -1.93
ZKSCAN3Q9BRR0 RNU6-41P-201ENST00000384741 107 ntBASIC2.98□□□□□ -1.93
ZKSCAN3Q9BRR0 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
ZKSCAN3Q9BRR0 SNORA11.4-201ENST00000408823 129 ntBASIC2.98□□□□□ -1.93
ZKSCAN3Q9BRR0 AC245047.3-201ENST00000429428 127 ntBASIC2.98□□□□□ -1.93
ZKSCAN3Q9BRR0 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.98□□□□□ -1.93
ZKSCAN3Q9BRR0 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.98□□□□□ -1.93
ZKSCAN3Q9BRR0 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.98□□□□□ -1.93
ZKSCAN3Q9BRR0 RNU7-25P-201ENST00000516544 62 ntBASIC2.98□□□□□ -1.93
ZKSCAN3Q9BRR0 RNU6-56P-201ENST00000516986 93 ntBASIC2.98□□□□□ -1.93
ZKSCAN3Q9BRR0 AC004486.1-201ENST00000546846 233 ntBASIC2.98□□□□□ -1.93
ZKSCAN3Q9BRR0 AC007012.1-201ENST00000567192 175 ntBASIC2.98□□□□□ -1.93
ZKSCAN3Q9BRR0 uc_338.28-201ENST00000612082 187 ntBASIC2.98□□□□□ -1.93
ZKSCAN3Q9BRR0 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
ZKSCAN3Q9BRR0 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.98□□□□□ -1.93
ZKSCAN3Q9BRR0 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
ZKSCAN3Q9BRR0 MIR449A-201ENST00000362113 91 ntBASIC2.97□□□□□ -1.93
ZKSCAN3Q9BRR0 RNU6-268P-201ENST00000364174 107 ntBASIC2.97□□□□□ -1.93
ZKSCAN3Q9BRR0 SNORA2.2-201ENST00000365473 135 ntBASIC2.97□□□□□ -1.93
ZKSCAN3Q9BRR0 MIR627-201ENST00000384979 97 ntBASIC2.97□□□□□ -1.93
ZKSCAN3Q9BRR0 SNRPGP14-201ENST00000435400 219 ntBASIC2.97□□□□□ -1.93
ZKSCAN3Q9BRR0 AC099677.2-201ENST00000436385 175 ntBASIC2.97□□□□□ -1.93
ZKSCAN3Q9BRR0 HMGN2P32-201ENST00000444648 269 ntBASIC2.97□□□□□ -1.93
ZKSCAN3Q9BRR0 SNORD45.4-201ENST00000516629 73 ntBASIC2.97□□□□□ -1.93
ZKSCAN3Q9BRR0 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.97□□□□□ -1.93
ZKSCAN3Q9BRR0 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.97□□□□□ -1.93
ZKSCAN3Q9BRR0 AC245060.5-201ENST00000610778 3293 ntBASIC2.97□□□□□ -1.93
ZKSCAN3Q9BRR0 Y_RNA.265-201ENST00000364677 108 ntBASIC2.96□□□□□ -1.94
ZKSCAN3Q9BRR0 Y_RNA.495-201ENST00000384435 112 ntBASIC2.96□□□□□ -1.94
ZKSCAN3Q9BRR0 Y_RNA.500-201ENST00000384466 111 ntBASIC2.96□□□□□ -1.94
ZKSCAN3Q9BRR0 MIR27B-201ENST00000385129 97 ntBASIC2.96□□□□□ -1.94
ZKSCAN3Q9BRR0 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
ZKSCAN3Q9BRR0 MIR887-201ENST00000401258 79 ntBASIC2.96□□□□□ -1.94
ZKSCAN3Q9BRR0 RN7SL499P-201ENST00000481141 276 ntBASIC2.96□□□□□ -1.94
ZKSCAN3Q9BRR0 Y_RNA.694-201ENST00000516677 117 ntBASIC2.96□□□□□ -1.94
ZKSCAN3Q9BRR0 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.95□□□□□ -1.94
ZKSCAN3Q9BRR0 ZNF720P1-201ENST00000562403 1939 ntBASIC2.95□□□□□ -1.94
ZKSCAN3Q9BRR0 MIR450A1-201ENST00000362262 91 ntBASIC2.95□□□□□ -1.94
ZKSCAN3Q9BRR0 Y_RNA.37-201ENST00000362606 108 ntBASIC2.95□□□□□ -1.94
ZKSCAN3Q9BRR0 RNU6-1107P-201ENST00000364817 104 ntBASIC2.95□□□□□ -1.94
ZKSCAN3Q9BRR0 Y_RNA.547-201ENST00000384654 119 ntBASIC2.95□□□□□ -1.94
ZKSCAN3Q9BRR0 AL445646.1-201ENST00000431784 216 ntBASIC2.95□□□□□ -1.94
ZKSCAN3Q9BRR0 Z96811.1-201ENST00000445880 108 ntBASIC2.95□□□□□ -1.94
ZKSCAN3Q9BRR0 RNU6-240P-201ENST00000516098 97 ntBASIC2.95□□□□□ -1.94
ZKSCAN3Q9BRR0 RNU7-70P-201ENST00000516941 66 ntBASIC2.95□□□□□ -1.94
ZKSCAN3Q9BRR0 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.95□□□□□ -1.94
ZKSCAN3Q9BRR0 Y_RNA.85-201ENST00000363014 111 ntBASIC2.94□□□□□ -1.94
ZKSCAN3Q9BRR0 SNORA80E-201ENST00000384744 137 ntBASIC2.94□□□□□ -1.94
ZKSCAN3Q9BRR0 SNORD12C-201ENST00000386307 89 ntBASIC2.94□□□□□ -1.94
ZKSCAN3Q9BRR0 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC2.94□□□□□ -1.94
ZKSCAN3Q9BRR0 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.94□□□□□ -1.94
ZKSCAN3Q9BRR0 RPS29P24-201ENST00000486345 171 ntBASIC2.94□□□□□ -1.94
ZKSCAN3Q9BRR0 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.94□□□□□ -1.94
ZKSCAN3Q9BRR0 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.94□□□□□ -1.94
ZKSCAN3Q9BRR0 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.94□□□□□ -1.94
ZKSCAN3Q9BRR0 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
ZKSCAN3Q9BRR0 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
ZKSCAN3Q9BRR0 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.93□□□□□ -1.94
ZKSCAN3Q9BRR0 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.93□□□□□ -1.94
ZKSCAN3Q9BRR0 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
ZKSCAN3Q9BRR0 RNU6-690P-201ENST00000365242 106 ntBASIC2.93□□□□□ -1.94
ZKSCAN3Q9BRR0 RNU6-106P-201ENST00000384405 107 ntBASIC2.93□□□□□ -1.94
ZKSCAN3Q9BRR0 MIR29C-201ENST00000385231 88 ntBASIC2.93□□□□□ -1.94
ZKSCAN3Q9BRR0 AL606517.2-201ENST00000442855 241 ntBASIC2.93□□□□□ -1.94
ZKSCAN3Q9BRR0 AC104389.3-201ENST00000445629 235 ntBASIC2.93□□□□□ -1.94
ZKSCAN3Q9BRR0 RPL23AP94-201ENST00000512518 302 ntBASIC2.93□□□□□ -1.94
ZKSCAN3Q9BRR0 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.93□□□□□ -1.94
ZKSCAN3Q9BRR0 AC005786.1-201ENST00000588553 154 ntBASIC2.93□□□□□ -1.94
ZKSCAN3Q9BRR0 Y_RNA.198-201ENST00000364013 98 ntBASIC2.92□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 211.4 ms