Protein–RNA interactions for Protein: Q99638

RAD9A, Cell cycle checkpoint control protein RAD9A, humanhuman

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD9AQ99638 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.39□□□□□ -2.19
RAD9AQ99638 RNU2-31P-201ENST00000516954 155 ntBASIC1.39□□□□□ -2.19
RAD9AQ99638 AC024405.2-202ENST00000532731 184 ntBASIC1.39□□□□□ -2.19
RAD9AQ99638 MIR4719-201ENST00000585233 84 ntBASIC1.39□□□□□ -2.19
RAD9AQ99638 FAM106DP-201ENST00000586416 501 ntBASIC1.39□□□□□ -2.19
RAD9AQ99638 AC008737.2-201ENST00000599446 118 ntBASIC1.39□□□□□ -2.19
RAD9AQ99638 AP003357.1-201ENST00000604497 148 ntBASIC1.39□□□□□ -2.19
RAD9AQ99638 AC037487.3-201ENST00000606668 112 ntBASIC1.39□□□□□ -2.19
RAD9AQ99638 AL121890.5-201ENST00000620848 304 ntBASIC1.39□□□□□ -2.19
RAD9AQ99638 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.38□□□□□ -2.19
RAD9AQ99638 Y_RNA.84-201ENST00000363011 104 ntBASIC1.38□□□□□ -2.19
RAD9AQ99638 SNORD68-201ENST00000363214 84 ntBASIC1.38□□□□□ -2.19
RAD9AQ99638 Y_RNA.145-201ENST00000363527 102 ntBASIC1.38□□□□□ -2.19
RAD9AQ99638 SNORD114-26-201ENST00000363543 72 ntBASIC1.38□□□□□ -2.19
RAD9AQ99638 RNU6-801P-201ENST00000364087 105 ntBASIC1.38□□□□□ -2.19
RAD9AQ99638 U8.7-201ENST00000364940 136 ntBASIC1.38□□□□□ -2.19
RAD9AQ99638 SNORD26-201ENST00000384147 75 ntBASIC1.38□□□□□ -2.19
RAD9AQ99638 RNU6-738P-201ENST00000384531 106 ntBASIC1.38□□□□□ -2.19
RAD9AQ99638 RNU6-1105P-201ENST00000384774 107 ntBASIC1.38□□□□□ -2.19
RAD9AQ99638 AC104332.1-201ENST00000440471 797 ntBASIC1.38□□□□□ -2.19
RAD9AQ99638 MTND4LP30-201ENST00000454092 297 ntBASIC1.38□□□□□ -2.19
RAD9AQ99638 MTND5P22-201ENST00000458380 195 ntBASIC1.38□□□□□ -2.19
RAD9AQ99638 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.38□□□□□ -2.19
RAD9AQ99638 RNU7-115P-201ENST00000516433 55 ntBASIC1.38□□□□□ -2.19
RAD9AQ99638 RNU6-635P-201ENST00000516651 102 ntBASIC1.38□□□□□ -2.19
RAD9AQ99638 AC019176.1-201ENST00000518519 225 ntBASIC1.38□□□□□ -2.19
RAD9AQ99638 MIR4778-201ENST00000577635 80 ntBASIC1.38□□□□□ -2.19
RAD9AQ99638 MIR3937-201ENST00000580135 106 ntBASIC1.38□□□□□ -2.19
RAD9AQ99638 AL591926.4-201ENST00000616895 298 ntBASIC1.38□□□□□ -2.19
RAD9AQ99638 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
RAD9AQ99638 MIRLET7C-201ENST00000362160 84 ntBASIC1.37□□□□□ -2.19
RAD9AQ99638 SNORA25.1-201ENST00000362326 128 ntBASIC1.37□□□□□ -2.19
RAD9AQ99638 Y_RNA.16-201ENST00000362421 102 ntBASIC1.37□□□□□ -2.19
RAD9AQ99638 SNORD114-27-201ENST00000363766 70 ntBASIC1.37□□□□□ -2.19
RAD9AQ99638 RNU6-1048P-201ENST00000364054 107 ntBASIC1.37□□□□□ -2.19
RAD9AQ99638 RNU6-326P-201ENST00000365480 107 ntBASIC1.37□□□□□ -2.19
RAD9AQ99638 SNORA72.4-201ENST00000384174 132 ntBASIC1.37□□□□□ -2.19
RAD9AQ99638 RNU6-713P-201ENST00000384761 107 ntBASIC1.37□□□□□ -2.19
RAD9AQ99638 RNU2-14P-201ENST00000411053 191 ntBASIC1.37□□□□□ -2.19
RAD9AQ99638 SNX2P2-201ENST00000424553 323 ntBASIC1.37□□□□□ -2.19
RAD9AQ99638 U8.19-201ENST00000459095 133 ntBASIC1.37□□□□□ -2.19
RAD9AQ99638 RPS29P1-201ENST00000465274 159 ntBASIC1.37□□□□□ -2.19
RAD9AQ99638 RPL23AP54-201ENST00000495129 419 ntBASIC1.37□□□□□ -2.19
RAD9AQ99638 RNU7-12P-201ENST00000516030 62 ntBASIC1.37□□□□□ -2.19
RAD9AQ99638 RNU6-570P-201ENST00000517051 105 ntBASIC1.37□□□□□ -2.19
RAD9AQ99638 AC127455.1-201ENST00000565496 145 ntBASIC1.37□□□□□ -2.19
RAD9AQ99638 AL512605.2-201ENST00000592972 256 ntBASIC1.37□□□□□ -2.19
RAD9AQ99638 AL365434.2-201ENST00000607979 234 ntBASIC1.37□□□□□ -2.19
RAD9AQ99638 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.37□□□□□ -2.19
RAD9AQ99638 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC1.37□□□□□ -2.19
RAD9AQ99638 MIR548AY-201ENST00000617669 107 ntBASIC1.37□□□□□ -2.19
RAD9AQ99638 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.37□□□□□ -2.19
RAD9AQ99638 RNU6-238P-201ENST00000363313 106 ntBASIC1.36□□□□□ -2.19
RAD9AQ99638 Y_RNA.253-201ENST00000364562 112 ntBASIC1.36□□□□□ -2.19
RAD9AQ99638 RNU6-514P-201ENST00000384208 107 ntBASIC1.36□□□□□ -2.19
RAD9AQ99638 Y_RNA.512-201ENST00000384518 102 ntBASIC1.36□□□□□ -2.19
RAD9AQ99638 SNORA26.5-201ENST00000391215 123 ntBASIC1.36□□□□□ -2.19
RAD9AQ99638 RNU7-141P-201ENST00000459304 62 ntBASIC1.36□□□□□ -2.19
RAD9AQ99638 RNU6-1223P-201ENST00000517124 104 ntBASIC1.36□□□□□ -2.19
RAD9AQ99638 RNU6-1116P-201ENST00000517269 99 ntBASIC1.36□□□□□ -2.19
RAD9AQ99638 RNU6-1203P-201ENST00000410703 110 ntBASIC1.35□□□□□ -2.19
RAD9AQ99638 RPS27P16-201ENST00000425758 201 ntBASIC1.35□□□□□ -2.19
RAD9AQ99638 AC093850.1-201ENST00000454121 251 ntBASIC1.35□□□□□ -2.19
RAD9AQ99638 RNA5SP61-201ENST00000516453 100 ntBASIC1.35□□□□□ -2.19
RAD9AQ99638 AC008269.2-201ENST00000561915 1105 ntBASIC1.35□□□□□ -2.19
RAD9AQ99638 AL360085.1-201ENST00000604713 532 ntBASIC1.35□□□□□ -2.19
RAD9AQ99638 AC106754.2-201ENST00000623006 233 ntBASIC1.35□□□□□ -2.19
RAD9AQ99638 AC134026.1-201ENST00000623249 2239 ntBASIC1.34□□□□□ -2.19
RAD9AQ99638 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.34□□□□□ -2.19
RAD9AQ99638 U8.5-201ENST00000364528 136 ntBASIC1.34□□□□□ -2.19
RAD9AQ99638 Y_RNA.459-201ENST00000384251 102 ntBASIC1.34□□□□□ -2.19
RAD9AQ99638 MIR222-201ENST00000384992 110 ntBASIC1.34□□□□□ -2.19
RAD9AQ99638 RNU6-763P-201ENST00000390865 106 ntBASIC1.34□□□□□ -2.19
RAD9AQ99638 MTCO2P33-201ENST00000402100 465 ntBASIC1.34□□□□□ -2.19
RAD9AQ99638 MIR548F4-201ENST00000408515 105 ntBASIC1.34□□□□□ -2.19
RAD9AQ99638 MLLT10P1-201ENST00000418346 262 ntBASIC1.34□□□□□ -2.19
RAD9AQ99638 RPL39P38-201ENST00000467018 153 ntBASIC1.34□□□□□ -2.19
RAD9AQ99638 TRBVB-201ENST00000477100 408 ntBASIC1.34□□□□□ -2.19
RAD9AQ99638 AC091959.1-201ENST00000495857 238 ntBASIC1.34□□□□□ -2.19
RAD9AQ99638 CYCTP-201ENST00000504253 315 ntBASIC1.34□□□□□ -2.19
RAD9AQ99638 RNU6-1338P-201ENST00000516328 91 ntBASIC1.34□□□□□ -2.19
RAD9AQ99638 SCARNA15.1-201ENST00000516384 125 ntBASIC1.34□□□□□ -2.19
RAD9AQ99638 SCARNA24.2-201ENST00000516968 130 ntBASIC1.34□□□□□ -2.19
RAD9AQ99638 MIR4762-201ENST00000585261 75 ntBASIC1.34□□□□□ -2.19
RAD9AQ99638 AC120024.3-201ENST00000603167 156 ntBASIC1.34□□□□□ -2.19
RAD9AQ99638 AL078604.3-201ENST00000615580 211 ntBASIC1.34□□□□□ -2.19
RAD9AQ99638 AC007742.2-201ENST00000618226 398 ntBASIC1.34□□□□□ -2.19
RAD9AQ99638 MIR6788-201ENST00000618842 66 ntBASIC1.34□□□□□ -2.19
RAD9AQ99638 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC1.33□□□□□ -2.2
RAD9AQ99638 RNU6-199P-201ENST00000362954 107 ntBASIC1.33□□□□□ -2.2
RAD9AQ99638 Y_RNA.203-201ENST00000364106 102 ntBASIC1.33□□□□□ -2.2
RAD9AQ99638 Y_RNA.376-201ENST00000365638 108 ntBASIC1.33□□□□□ -2.2
RAD9AQ99638 RNU6-163P-201ENST00000384396 106 ntBASIC1.33□□□□□ -2.2
RAD9AQ99638 Y_RNA.574-201ENST00000384766 95 ntBASIC1.33□□□□□ -2.2
RAD9AQ99638 MIR522-201ENST00000385071 87 ntBASIC1.33□□□□□ -2.2
RAD9AQ99638 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.33□□□□□ -2.2
RAD9AQ99638 SNORA36B-201ENST00000410438 131 ntBASIC1.33□□□□□ -2.2
RAD9AQ99638 PIGPP3-201ENST00000425307 415 ntBASIC1.33□□□□□ -2.2
RAD9AQ99638 AC092991.1-201ENST00000477176 376 ntBASIC1.33□□□□□ -2.2
RAD9AQ99638 SERF1AP1-201ENST00000514575 187 ntBASIC1.33□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 120.6 ms