Protein–RNA interactions for Protein: Q99250

SCN2A, Sodium channel protein type 2 subunit alpha, humanhuman

Predictions only

Length 2,005 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2AQ99250 RNU5E-4P-201ENST00000364931 120 ntBASIC0.86□□□□□ -2.27
SCN2AQ99250 Y_RNA.395-201ENST00000383945 109 ntBASIC0.86□□□□□ -2.27
SCN2AQ99250 SNORA72.4-201ENST00000384174 132 ntBASIC0.86□□□□□ -2.27
SCN2AQ99250 MIR452-201ENST00000385020 85 ntBASIC0.86□□□□□ -2.27
SCN2AQ99250 UBL5P1-201ENST00000507979 193 ntBASIC0.86□□□□□ -2.27
SCN2AQ99250 RNU4-57P-201ENST00000515980 135 ntBASIC0.86□□□□□ -2.27
SCN2AQ99250 RNU6-764P-201ENST00000516396 105 ntBASIC0.86□□□□□ -2.27
SCN2AQ99250 RNU6-63P-201ENST00000516690 95 ntBASIC0.86□□□□□ -2.27
SCN2AQ99250 RNU7-110P-201ENST00000516891 62 ntBASIC0.86□□□□□ -2.27
SCN2AQ99250 AC015688.6-201ENST00000577737 104 ntBASIC0.86□□□□□ -2.27
SCN2AQ99250 MIR4764-201ENST00000580680 88 ntBASIC0.86□□□□□ -2.27
SCN2AQ99250 AC040896.1-201ENST00000613819 479 ntBASIC0.86□□□□□ -2.27
SCN2AQ99250 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.86□□□□□ -2.27
SCN2AQ99250 Y_RNA.242-201ENST00000364473 110 ntBASIC0.85□□□□□ -2.27
SCN2AQ99250 Y_RNA.526-201ENST00000384572 110 ntBASIC0.85□□□□□ -2.27
SCN2AQ99250 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC0.85□□□□□ -2.27
SCN2AQ99250 PMCHL1-202ENST00000423102 261 ntBASIC0.85□□□□□ -2.27
SCN2AQ99250 RNU7-116P-201ENST00000516940 62 ntBASIC0.85□□□□□ -2.27
SCN2AQ99250 RNA5SP404-201ENST00000517118 132 ntBASIC0.85□□□□□ -2.27
SCN2AQ99250 SNORD116.3-201ENST00000517176 78 ntBASIC0.85□□□□□ -2.27
SCN2AQ99250 AC044792.1-201ENST00000593294 196 ntBASIC0.85□□□□□ -2.27
SCN2AQ99250 AC117470.1-201ENST00000381974 330 ntBASIC0.84□□□□□ -2.27
SCN2AQ99250 MIR520E-201ENST00000384867 87 ntBASIC0.84□□□□□ -2.27
SCN2AQ99250 RNU6-823P-201ENST00000391042 103 ntBASIC0.84□□□□□ -2.27
SCN2AQ99250 RNU6-1248P-201ENST00000391096 64 ntBASIC0.84□□□□□ -2.27
SCN2AQ99250 AL591704.2-201ENST00000421658 181 ntBASIC0.84□□□□□ -2.27
SCN2AQ99250 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC0.84□□□□□ -2.27
SCN2AQ99250 AC004832.4-201ENST00000608952 331 ntBASIC0.84□□□□□ -2.27
SCN2AQ99250 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC0.84□□□□□ -2.28
SCN2AQ99250 RNU4-76P-201ENST00000364509 141 ntBASIC0.84□□□□□ -2.28
SCN2AQ99250 RNU6-163P-201ENST00000384396 106 ntBASIC0.84□□□□□ -2.28
SCN2AQ99250 Y_RNA.509-201ENST00000384506 99 ntBASIC0.84□□□□□ -2.28
SCN2AQ99250 MIR1302-11-201ENST00000408051 138 ntBASIC0.84□□□□□ -2.28
SCN2AQ99250 MIR548P-201ENST00000408336 84 ntBASIC0.84□□□□□ -2.28
SCN2AQ99250 MIR1302-9-201ENST00000408365 138 ntBASIC0.84□□□□□ -2.28
SCN2AQ99250 MIR1302-10-201ENST00000408734 138 ntBASIC0.84□□□□□ -2.28
SCN2AQ99250 AL731563.1-201ENST00000442202 214 ntBASIC0.84□□□□□ -2.28
SCN2AQ99250 STAG3L5P-204ENST00000443759 179 ntBASIC0.84□□□□□ -2.28
SCN2AQ99250 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.84□□□□□ -2.28
SCN2AQ99250 SNORA31.2-201ENST00000516019 134 ntBASIC0.84□□□□□ -2.28
SCN2AQ99250 RNU4-77P-201ENST00000516692 156 ntBASIC0.84□□□□□ -2.28
SCN2AQ99250 RNU7-149P-201ENST00000516739 59 ntBASIC0.84□□□□□ -2.28
SCN2AQ99250 AC024405.2-202ENST00000532731 184 ntBASIC0.84□□□□□ -2.28
SCN2AQ99250 AC127455.1-201ENST00000565496 145 ntBASIC0.84□□□□□ -2.28
SCN2AQ99250 AL020996.3-201ENST00000606617 222 ntBASIC0.84□□□□□ -2.28
SCN2AQ99250 MIR1302-2-201ENST00000607096 138 ntBASIC0.84□□□□□ -2.28
SCN2AQ99250 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC0.83□□□□□ -2.28
SCN2AQ99250 SNORD81.1-201ENST00000363064 77 ntBASIC0.83□□□□□ -2.28
SCN2AQ99250 SNORD114-2-201ENST00000363953 78 ntBASIC0.83□□□□□ -2.28
SCN2AQ99250 Y_RNA.460-201ENST00000384255 102 ntBASIC0.83□□□□□ -2.28
SCN2AQ99250 MIR136-201ENST00000385207 82 ntBASIC0.83□□□□□ -2.28
SCN2AQ99250 SNORD115-46-201ENST00000390982 71 ntBASIC0.83□□□□□ -2.28
SCN2AQ99250 MIR1278-201ENST00000408753 81 ntBASIC0.83□□□□□ -2.28
SCN2AQ99250 RNU6-121P-201ENST00000410525 99 ntBASIC0.83□□□□□ -2.28
SCN2AQ99250 CALM2P4-201ENST00000430810 426 ntBASIC0.83□□□□□ -2.28
SCN2AQ99250 AL512605.2-201ENST00000592972 256 ntBASIC0.83□□□□□ -2.28
SCN2AQ99250 AC022140.2-201ENST00000623500 188 ntBASIC0.83□□□□□ -2.28
SCN2AQ99250 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.83□□□□□ -2.28
SCN2AQ99250 RNU6-125P-201ENST00000384505 107 ntBASIC0.82□□□□□ -2.28
SCN2AQ99250 RNU6-21P-201ENST00000384710 107 ntBASIC0.82□□□□□ -2.28
SCN2AQ99250 RNU6-855P-201ENST00000410395 104 ntBASIC0.82□□□□□ -2.28
SCN2AQ99250 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC0.82□□□□□ -2.28
SCN2AQ99250 AC024067.1-201ENST00000426199 223 ntBASIC0.82□□□□□ -2.28
SCN2AQ99250 BTF3P11-201ENST00000426582 477 ntBASIC0.82□□□□□ -2.28
SCN2AQ99250 MTCO1P5-201ENST00000433573 344 ntBASIC0.82□□□□□ -2.28
SCN2AQ99250 DYNLT3P2-201ENST00000442517 295 ntBASIC0.82□□□□□ -2.28
SCN2AQ99250 AC245047.8-201ENST00000456455 284 ntBASIC0.82□□□□□ -2.28
SCN2AQ99250 SNORA31.10-201ENST00000516482 106 ntBASIC0.82□□□□□ -2.28
SCN2AQ99250 RNU6-1007P-201ENST00000516586 107 ntBASIC0.82□□□□□ -2.28
SCN2AQ99250 AL022345.2-201ENST00000606307 135 ntBASIC0.82□□□□□ -2.28
SCN2AQ99250 AC007742.2-201ENST00000618226 398 ntBASIC0.82□□□□□ -2.28
SCN2AQ99250 AC010487.4-201ENST00000637027 61 ntBASIC0.82□□□□□ -2.28
SCN2AQ99250 RNU6-674P-201ENST00000363831 107 ntBASIC0.82□□□□□ -2.28
SCN2AQ99250 MIR520C-201ENST00000385005 87 ntBASIC0.82□□□□□ -2.28
SCN2AQ99250 AC004941.2-201ENST00000427009 228 ntBASIC0.82□□□□□ -2.28
SCN2AQ99250 SNORD11-201ENST00000459124 84 ntBASIC0.82□□□□□ -2.28
SCN2AQ99250 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC0.82□□□□□ -2.28
SCN2AQ99250 SEPT14P8-201ENST00000508026 178 ntBASIC0.82□□□□□ -2.28
SCN2AQ99250 SERF1AP1-201ENST00000514575 187 ntBASIC0.82□□□□□ -2.28
SCN2AQ99250 RNA5SP436-201ENST00000516020 115 ntBASIC0.82□□□□□ -2.28
SCN2AQ99250 RNU6-397P-201ENST00000516226 104 ntBASIC0.82□□□□□ -2.28
SCN2AQ99250 RNU6-947P-201ENST00000516264 106 ntBASIC0.82□□□□□ -2.28
SCN2AQ99250 RNU6-1096P-201ENST00000517089 102 ntBASIC0.82□□□□□ -2.28
SCN2AQ99250 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.82□□□□□ -2.28
SCN2AQ99250 MIR6835-201ENST00000621552 64 ntBASIC0.82□□□□□ -2.28
SCN2AQ99250 Y_RNA.128-201ENST00000363391 112 ntBASIC0.81□□□□□ -2.28
SCN2AQ99250 Y_RNA.136-201ENST00000363444 102 ntBASIC0.81□□□□□ -2.28
SCN2AQ99250 SNORA36B-201ENST00000410438 131 ntBASIC0.81□□□□□ -2.28
SCN2AQ99250 Y_RNA.602-201ENST00000410535 92 ntBASIC0.81□□□□□ -2.28
SCN2AQ99250 MLLT10P1-201ENST00000418346 262 ntBASIC0.81□□□□□ -2.28
SCN2AQ99250 MRPL35P3-201ENST00000421557 364 ntBASIC0.81□□□□□ -2.28
SCN2AQ99250 RNU6-1143P-201ENST00000516125 104 ntBASIC0.81□□□□□ -2.28
SCN2AQ99250 RNU7-43P-201ENST00000516554 64 ntBASIC0.81□□□□□ -2.28
SCN2AQ99250 RNU6-897P-201ENST00000517135 105 ntBASIC0.81□□□□□ -2.28
SCN2AQ99250 MIR3973-201ENST00000579824 107 ntBASIC0.81□□□□□ -2.28
SCN2AQ99250 FAM71BP1-201ENST00000604431 523 ntBASIC0.81□□□□□ -2.28
SCN2AQ99250 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.81□□□□□ -2.28
SCN2AQ99250 RNU6-969P-201ENST00000383900 105 ntBASIC0.81□□□□□ -2.28
SCN2AQ99250 AC104332.1-201ENST00000440471 797 ntBASIC0.81□□□□□ -2.28
SCN2AQ99250 AC233266.1-201ENST00000454518 96 ntBASIC0.81□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 144.6 ms