Protein–RNA interactions for Protein: Q96RL7

VPS13A, Vacuolar protein sorting-associated protein 13A, humanhuman

Predictions only

Length 3,174 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13AQ96RL7 RNA5SP245-201ENST00000364239 121 ntBASIC-2.75□□□□□ -2.85
VPS13AQ96RL7 RNU6-932P-201ENST00000391108 106 ntBASIC-2.75□□□□□ -2.85
VPS13AQ96RL7 AC068587.5-201ENST00000528506 175 ntBASIC-2.75□□□□□ -2.85
VPS13AQ96RL7 AC103996.1-201ENST00000555468 102 ntBASIC-2.75□□□□□ -2.85
VPS13AQ96RL7 AL139418.1-201ENST00000613613 177 ntBASIC-2.75□□□□□ -2.85
VPS13AQ96RL7 AL159153.1-201ENST00000619688 317 ntBASIC-2.75□□□□□ -2.85
VPS13AQ96RL7 AC092656.1-203ENST00000624134 423 ntBASIC-2.75□□□□□ -2.85
VPS13AQ96RL7 Y_RNA.319-201ENST00000365138 92 ntBASIC-2.76□□□□□ -2.85
VPS13AQ96RL7 MIR617-201ENST00000385030 97 ntBASIC-2.76□□□□□ -2.85
VPS13AQ96RL7 MIR652-201ENST00000385278 98 ntBASIC-2.76□□□□□ -2.85
VPS13AQ96RL7 RNU6-1186P-201ENST00000410429 97 ntBASIC-2.76□□□□□ -2.85
VPS13AQ96RL7 AC055872.1-201ENST00000570978 278 ntBASIC-2.76□□□□□ -2.85
VPS13AQ96RL7 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC-2.76□□□□□ -2.85
VPS13AQ96RL7 AC013437.2-201ENST00000639587 677 ntBASIC-2.76□□□□□ -2.85
VPS13AQ96RL7 Y_RNA.248-201ENST00000364501 109 ntBASIC-2.76□□□□□ -2.85
VPS13AQ96RL7 MIR1253-201ENST00000408273 105 ntBASIC-2.76□□□□□ -2.85
VPS13AQ96RL7 RNU6-703P-201ENST00000516946 107 ntBASIC-2.76□□□□□ -2.85
VPS13AQ96RL7 AC069503.3-201ENST00000618674 145 ntBASIC-2.76□□□□□ -2.85
VPS13AQ96RL7 RNU4-15P-201ENST00000362613 141 ntBASIC-2.77□□□□□ -2.85
VPS13AQ96RL7 Y_RNA.253-201ENST00000364562 112 ntBASIC-2.77□□□□□ -2.85
VPS13AQ96RL7 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC-2.77□□□□□ -2.85
VPS13AQ96RL7 Y_RNA.51-201ENST00000362725 102 ntBASIC-2.77□□□□□ -2.85
VPS13AQ96RL7 RNU6-216P-201ENST00000363282 104 ntBASIC-2.77□□□□□ -2.85
VPS13AQ96RL7 RNU6-685P-201ENST00000517088 95 ntBASIC-2.77□□□□□ -2.85
VPS13AQ96RL7 C1DP5-201ENST00000525775 383 ntBASIC-2.77□□□□□ -2.85
VPS13AQ96RL7 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC-2.77□□□□□ -2.85
VPS13AQ96RL7 U6.48-201ENST00000618523 106 ntBASIC-2.77□□□□□ -2.85
VPS13AQ96RL7 MESTIT1_1.1-201ENST00000618871 140 ntBASIC-2.77□□□□□ -2.85
VPS13AQ96RL7 RPS3AP52-201ENST00000435639 297 ntBASIC-2.77□□□□□ -2.85
VPS13AQ96RL7 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC-2.77□□□□□ -2.85
VPS13AQ96RL7 AL158042.1-201ENST00000605338 460 ntBASIC-2.77□□□□□ -2.85
VPS13AQ96RL7 RNU6-653P-201ENST00000363074 106 ntBASIC-2.78□□□□□ -2.85
VPS13AQ96RL7 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC-2.78□□□□□ -2.85
VPS13AQ96RL7 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-2.78□□□□□ -2.85
VPS13AQ96RL7 Z94722.1-201ENST00000604328 474 ntBASIC-2.78□□□□□ -2.85
VPS13AQ96RL7 AL008987.1-201ENST00000415528 237 ntBASIC-2.78□□□□□ -2.85
VPS13AQ96RL7 AC097484.2-201ENST00000509147 251 ntBASIC-2.78□□□□□ -2.85
VPS13AQ96RL7 AC008494.2-201ENST00000514544 370 ntBASIC-2.78□□□□□ -2.85
VPS13AQ96RL7 DISC2.1-201ENST00000612827 205 ntBASIC-2.78□□□□□ -2.85
VPS13AQ96RL7 SNORA63.5-201ENST00000363548 123 ntBASIC-2.79□□□□□ -2.86
VPS13AQ96RL7 RNU6-843P-201ENST00000384454 104 ntBASIC-2.79□□□□□ -2.86
VPS13AQ96RL7 SNORD65.1-201ENST00000390889 71 ntBASIC-2.79□□□□□ -2.86
VPS13AQ96RL7 RNU6-1300P-201ENST00000391046 108 ntBASIC-2.79□□□□□ -2.86
VPS13AQ96RL7 Y_RNA.603-201ENST00000410571 108 ntBASIC-2.79□□□□□ -2.86
VPS13AQ96RL7 BX119904.4-201ENST00000424402 301 ntBASIC-2.79□□□□□ -2.86
VPS13AQ96RL7 RNU6-840P-201ENST00000517275 65 ntBASIC-2.79□□□□□ -2.86
VPS13AQ96RL7 MTCYBP33-201ENST00000575007 1130 ntBASIC-2.79□□□□□ -2.86
VPS13AQ96RL7 RNA5SP237-201ENST00000410414 113 ntBASIC-2.79□□□□□ -2.86
VPS13AQ96RL7 AC131281.1-201ENST00000522984 164 ntBASIC-2.79□□□□□ -2.86
VPS13AQ96RL7 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC-2.79□□□□□ -2.86
VPS13AQ96RL7 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC-2.79□□□□□ -2.86
VPS13AQ96RL7 SNORD115-6-201ENST00000363942 82 ntBASIC-2.79□□□□□ -2.86
VPS13AQ96RL7 MIR549A-201ENST00000385268 96 ntBASIC-2.79□□□□□ -2.86
VPS13AQ96RL7 SNORD28B-201ENST00000390993 75 ntBASIC-2.79□□□□□ -2.86
VPS13AQ96RL7 RNU5B-6P-201ENST00000516765 68 ntBASIC-2.79□□□□□ -2.86
VPS13AQ96RL7 MTND1P8-201ENST00000571424 950 ntBASIC-2.79□□□□□ -2.86
VPS13AQ96RL7 MIR452-201ENST00000385020 85 ntBASIC-2.8□□□□□ -2.86
VPS13AQ96RL7 RNU6-958P-201ENST00000516995 106 ntBASIC-2.8□□□□□ -2.86
VPS13AQ96RL7 MIR548AY-201ENST00000617669 107 ntBASIC-2.8□□□□□ -2.86
VPS13AQ96RL7 AC108059.2-201ENST00000434626 151 ntBASIC-2.8□□□□□ -2.86
VPS13AQ96RL7 RNU7-99P-201ENST00000516271 62 ntBASIC-2.8□□□□□ -2.86
VPS13AQ96RL7 SNORD115-21-201ENST00000362963 81 ntBASIC-2.81□□□□□ -2.86
VPS13AQ96RL7 RNU6-1165P-201ENST00000410119 107 ntBASIC-2.81□□□□□ -2.86
VPS13AQ96RL7 AC010608.3-201ENST00000625048 527 ntBASIC-2.81□□□□□ -2.86
VPS13AQ96RL7 Y_RNA.148-201ENST00000363557 117 ntBASIC-2.81□□□□□ -2.86
VPS13AQ96RL7 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC-2.81□□□□□ -2.86
VPS13AQ96RL7 MIR4491-201ENST00000581087 68 ntBASIC-2.81□□□□□ -2.86
VPS13AQ96RL7 AC103591.3-201ENST00000608684 209 ntBASIC-2.81□□□□□ -2.86
VPS13AQ96RL7 RNU6-227P-201ENST00000362865 103 ntBASIC-2.82□□□□□ -2.86
VPS13AQ96RL7 RNU6-311P-201ENST00000516224 102 ntBASIC-2.82□□□□□ -2.86
VPS13AQ96RL7 snoU13.10-201ENST00000459301 103 ntBASIC-2.82□□□□□ -2.86
VPS13AQ96RL7 RNU6-245P-201ENST00000384020 107 ntBASIC-2.82□□□□□ -2.86
VPS13AQ96RL7 AL365338.1-201ENST00000422282 858 ntBASIC-2.82□□□□□ -2.86
VPS13AQ96RL7 AC013470.1-201ENST00000453438 462 ntBASIC-2.82□□□□□ -2.86
VPS13AQ96RL7 OSBPL9P5-201ENST00000542581 171 ntBASIC-2.82□□□□□ -2.86
VPS13AQ96RL7 Y_RNA.634-201ENST00000364811 113 ntBASIC-2.83□□□□□ -2.86
VPS13AQ96RL7 AC087683.1-201ENST00000591187 441 ntBASIC-2.83□□□□□ -2.86
VPS13AQ96RL7 RNU6-291P-201ENST00000384720 107 ntBASIC-2.83□□□□□ -2.86
VPS13AQ96RL7 Y_RNA.598-201ENST00000410480 95 ntBASIC-2.83□□□□□ -2.86
VPS13AQ96RL7 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC-2.83□□□□□ -2.86
VPS13AQ96RL7 Y_RNA.221-201ENST00000364248 96 ntBASIC-2.84□□□□□ -2.86
VPS13AQ96RL7 SNORD114-13-201ENST00000364377 74 ntBASIC-2.84□□□□□ -2.86
VPS13AQ96RL7 RNU6-80P-201ENST00000384195 107 ntBASIC-2.84□□□□□ -2.86
VPS13AQ96RL7 RNU6-21P-201ENST00000384710 107 ntBASIC-2.84□□□□□ -2.86
VPS13AQ96RL7 MTND3P5-201ENST00000512798 333 ntBASIC-2.84□□□□□ -2.86
VPS13AQ96RL7 RNU4ATAC4P-201ENST00000516307 126 ntBASIC-2.84□□□□□ -2.86
VPS13AQ96RL7 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC-2.84□□□□□ -2.86
VPS13AQ96RL7 PIGPP3-201ENST00000425307 415 ntBASIC-2.84□□□□□ -2.86
VPS13AQ96RL7 AC104850.1-201ENST00000435940 476 ntBASIC-2.84□□□□□ -2.86
VPS13AQ96RL7 RNU7-128P-201ENST00000517247 62 ntBASIC-2.84□□□□□ -2.86
VPS13AQ96RL7 MIR548W-201ENST00000581970 74 ntBASIC-2.84□□□□□ -2.86
VPS13AQ96RL7 MTND1P7-201ENST00000632801 297 ntBASIC-2.84□□□□□ -2.86
VPS13AQ96RL7 AC007012.1-201ENST00000567192 175 ntBASIC-2.84□□□□□ -2.86
VPS13AQ96RL7 RNU6-545P-201ENST00000362681 104 ntBASIC-2.85□□□□□ -2.87
VPS13AQ96RL7 SNORD116-20-201ENST00000384529 92 ntBASIC-2.85□□□□□ -2.87
VPS13AQ96RL7 AL390729.2-201ENST00000416137 156 ntBASIC-2.85□□□□□ -2.87
VPS13AQ96RL7 RNU6-1006P-201ENST00000516998 103 ntBASIC-2.85□□□□□ -2.87
VPS13AQ96RL7 AC120024.2-201ENST00000576526 175 ntBASIC-2.85□□□□□ -2.87
VPS13AQ96RL7 RNA5SP390-201ENST00000410191 113 ntBASIC-2.85□□□□□ -2.87
VPS13AQ96RL7 MTCO2P16-201ENST00000436962 677 ntBASIC-2.85□□□□□ -2.87
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms