Protein–RNA interactions for Protein: Q96PN7

TRERF1, Transcriptional-regulating factor 1, humanhuman

Predictions only

Length 1,200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1Q96PN7 MIR522-201ENST00000385071 87 ntBASIC3.42□□□□□ -1.86
TRERF1Q96PN7 MIR577-201ENST00000385196 96 ntBASIC3.42□□□□□ -1.86
TRERF1Q96PN7 RPL32P35-201ENST00000415214 394 ntBASIC3.42□□□□□ -1.86
TRERF1Q96PN7 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.42□□□□□ -1.86
TRERF1Q96PN7 AL135938.1-201ENST00000443141 297 ntBASIC3.42□□□□□ -1.86
TRERF1Q96PN7 RNU1-131P-201ENST00000458943 161 ntBASIC3.42□□□□□ -1.86
TRERF1Q96PN7 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.42□□□□□ -1.86
TRERF1Q96PN7 RNU6-857P-201ENST00000515893 110 ntBASIC3.42□□□□□ -1.86
TRERF1Q96PN7 RNU7-70P-201ENST00000516941 66 ntBASIC3.42□□□□□ -1.86
TRERF1Q96PN7 RNU6-586P-201ENST00000517265 104 ntBASIC3.42□□□□□ -1.86
TRERF1Q96PN7 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC3.42□□□□□ -1.86
TRERF1Q96PN7 AL513534.2-201ENST00000603836 250 ntBASIC3.42□□□□□ -1.86
TRERF1Q96PN7 Y_RNA.773-201ENST00000607168 90 ntBASIC3.42□□□□□ -1.86
TRERF1Q96PN7 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC3.42□□□□□ -1.86
TRERF1Q96PN7 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.42□□□□□ -1.86
TRERF1Q96PN7 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC3.42□□□□□ -1.86
TRERF1Q96PN7 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.42□□□□□ -1.86
TRERF1Q96PN7 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
TRERF1Q96PN7 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
TRERF1Q96PN7 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.41□□□□□ -1.86
TRERF1Q96PN7 RNU6-743P-201ENST00000364151 106 ntBASIC3.41□□□□□ -1.86
TRERF1Q96PN7 Y_RNA.547-201ENST00000384654 119 ntBASIC3.41□□□□□ -1.86
TRERF1Q96PN7 SNORA26.7-201ENST00000391288 122 ntBASIC3.41□□□□□ -1.86
TRERF1Q96PN7 AL451046.2-201ENST00000403074 277 ntBASIC3.41□□□□□ -1.86
TRERF1Q96PN7 RN7SL499P-201ENST00000481141 276 ntBASIC3.41□□□□□ -1.86
TRERF1Q96PN7 RNU6-856P-201ENST00000516959 98 ntBASIC3.41□□□□□ -1.86
TRERF1Q96PN7 MIR3618-201ENST00000580330 88 ntBASIC3.41□□□□□ -1.86
TRERF1Q96PN7 MIR5588-201ENST00000581890 63 ntBASIC3.41□□□□□ -1.86
TRERF1Q96PN7 MIR6079-201ENST00000635807 62 ntBASIC3.41□□□□□ -1.86
TRERF1Q96PN7 AC091304.10-201ENST00000641554 121 ntBASIC3.41□□□□□ -1.86
TRERF1Q96PN7 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.41□□□□□ -1.86
TRERF1Q96PN7 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.4□□□□□ -1.86
TRERF1Q96PN7 SNORD115-28-201ENST00000363931 81 ntBASIC3.4□□□□□ -1.87
TRERF1Q96PN7 Y_RNA.190-201ENST00000363964 101 ntBASIC3.4□□□□□ -1.87
TRERF1Q96PN7 FTH1P12-201ENST00000432137 551 ntBASIC3.4□□□□□ -1.87
TRERF1Q96PN7 UQCRHP3-201ENST00000451503 251 ntBASIC3.4□□□□□ -1.87
TRERF1Q96PN7 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC3.4□□□□□ -1.87
TRERF1Q96PN7 RNU7-99P-201ENST00000516271 62 ntBASIC3.4□□□□□ -1.87
TRERF1Q96PN7 AC091544.4-201ENST00000555268 342 ntBASIC3.4□□□□□ -1.87
TRERF1Q96PN7 GTF3AP2-201ENST00000557014 266 ntBASIC3.4□□□□□ -1.87
TRERF1Q96PN7 AC087685.1-201ENST00000587507 141 ntBASIC3.4□□□□□ -1.87
TRERF1Q96PN7 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.4□□□□□ -1.87
TRERF1Q96PN7 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
TRERF1Q96PN7 AC018630.2-201ENST00000534866 2403 ntBASIC3.39□□□□□ -1.87
TRERF1Q96PN7 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
TRERF1Q96PN7 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
TRERF1Q96PN7 RNU6-832P-201ENST00000363319 107 ntBASIC3.39□□□□□ -1.87
TRERF1Q96PN7 Y_RNA.360-201ENST00000365512 102 ntBASIC3.39□□□□□ -1.87
TRERF1Q96PN7 SNORA46-201ENST00000384762 135 ntBASIC3.39□□□□□ -1.87
TRERF1Q96PN7 MIR605-201ENST00000385078 83 ntBASIC3.39□□□□□ -1.87
TRERF1Q96PN7 RNA5SP467-201ENST00000391274 118 ntBASIC3.39□□□□□ -1.87
TRERF1Q96PN7 AC007536.1-201ENST00000533382 349 ntBASIC3.39□□□□□ -1.87
TRERF1Q96PN7 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC3.39□□□□□ -1.87
TRERF1Q96PN7 AC006441.5-201ENST00000612680 209 ntBASIC3.39□□□□□ -1.87
TRERF1Q96PN7 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.39□□□□□ -1.87
TRERF1Q96PN7 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
TRERF1Q96PN7 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
TRERF1Q96PN7 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.38□□□□□ -1.87
TRERF1Q96PN7 Y_RNA.437-201ENST00000384113 113 ntBASIC3.38□□□□□ -1.87
TRERF1Q96PN7 RNU6-851P-201ENST00000384565 107 ntBASIC3.38□□□□□ -1.87
TRERF1Q96PN7 MIR802-201ENST00000390235 94 ntBASIC3.38□□□□□ -1.87
TRERF1Q96PN7 AC096949.1-201ENST00000412047 152 ntBASIC3.38□□□□□ -1.87
TRERF1Q96PN7 AL445646.1-201ENST00000431784 216 ntBASIC3.38□□□□□ -1.87
TRERF1Q96PN7 AL353813.1-201ENST00000440700 253 ntBASIC3.38□□□□□ -1.87
TRERF1Q96PN7 AC093259.1-201ENST00000509755 300 ntBASIC3.38□□□□□ -1.87
TRERF1Q96PN7 RPL23AP94-201ENST00000512518 302 ntBASIC3.38□□□□□ -1.87
TRERF1Q96PN7 RNU6-341P-201ENST00000516973 96 ntBASIC3.38□□□□□ -1.87
TRERF1Q96PN7 MIR4666B-201ENST00000578142 81 ntBASIC3.38□□□□□ -1.87
TRERF1Q96PN7 MIR4694-201ENST00000578534 80 ntBASIC3.38□□□□□ -1.87
TRERF1Q96PN7 MIR4777-201ENST00000583710 86 ntBASIC3.38□□□□□ -1.87
TRERF1Q96PN7 ELOCP29-201ENST00000588193 334 ntBASIC3.38□□□□□ -1.87
TRERF1Q96PN7 AC091932.4-201ENST00000623386 200 ntBASIC3.38□□□□□ -1.87
TRERF1Q96PN7 AC095038.3-201ENST00000634439 195 ntBASIC3.38□□□□□ -1.87
TRERF1Q96PN7 U6.108-201ENST00000637764 58 ntBASIC3.38□□□□□ -1.87
TRERF1Q96PN7 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
TRERF1Q96PN7 ICE2P2-201ENST00000483823 2787 ntBASIC3.38□□□□□ -1.87
TRERF1Q96PN7 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.37□□□□□ -1.87
TRERF1Q96PN7 AC009487.2-201ENST00000420969 6821 ntBASIC3.37□□□□□ -1.87
TRERF1Q96PN7 Y_RNA.10-201ENST00000362371 110 ntBASIC3.37□□□□□ -1.87
TRERF1Q96PN7 Y_RNA.155-201ENST00000363632 101 ntBASIC3.37□□□□□ -1.87
TRERF1Q96PN7 RNU6-268P-201ENST00000364174 107 ntBASIC3.37□□□□□ -1.87
TRERF1Q96PN7 RNU6-219P-201ENST00000364728 107 ntBASIC3.37□□□□□ -1.87
TRERF1Q96PN7 Y_RNA.351-201ENST00000365436 96 ntBASIC3.37□□□□□ -1.87
TRERF1Q96PN7 RPS15AP28-201ENST00000435088 386 ntBASIC3.37□□□□□ -1.87
TRERF1Q96PN7 SNRPGP14-201ENST00000435400 219 ntBASIC3.37□□□□□ -1.87
TRERF1Q96PN7 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.37□□□□□ -1.87
TRERF1Q96PN7 RPS29P12-201ENST00000460178 152 ntBASIC3.37□□□□□ -1.87
TRERF1Q96PN7 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.37□□□□□ -1.87
TRERF1Q96PN7 SNORA4.4-201ENST00000515921 135 ntBASIC3.37□□□□□ -1.87
TRERF1Q96PN7 RNA5SP356-201ENST00000515972 94 ntBASIC3.37□□□□□ -1.87
TRERF1Q96PN7 RN7SKP132-201ENST00000516001 208 ntBASIC3.37□□□□□ -1.87
TRERF1Q96PN7 MIR3683-201ENST00000580847 82 ntBASIC3.37□□□□□ -1.87
TRERF1Q96PN7 AL359075.3-201ENST00000613288 217 ntBASIC3.37□□□□□ -1.87
TRERF1Q96PN7 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
TRERF1Q96PN7 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
TRERF1Q96PN7 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.37□□□□□ -1.87
TRERF1Q96PN7 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.36□□□□□ -1.87
TRERF1Q96PN7 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
TRERF1Q96PN7 SNORA1B-201ENST00000362535 133 ntBASIC3.36□□□□□ -1.87
TRERF1Q96PN7 SNORD115-13-201ENST00000363358 82 ntBASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms