Protein–RNA interactions for Protein: Q96NT0

CCDC115, Coiled-coil domain-containing protein 115, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC115Q96NT0 SNORA24-201ENST00000384096 131 ntBASIC-1.07□□□□□ -2.58
CCDC115Q96NT0 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC-1.07□□□□□ -2.58
CCDC115Q96NT0 SNORA19.2-201ENST00000516013 114 ntBASIC-1.07□□□□□ -2.58
CCDC115Q96NT0 RNA5SP476-201ENST00000516613 103 ntBASIC-1.07□□□□□ -2.58
CCDC115Q96NT0 AP001328.1-201ENST00000528550 176 ntBASIC-1.07□□□□□ -2.58
CCDC115Q96NT0 MTND1P24-201ENST00000552175 861 ntBASIC-1.07□□□□□ -2.58
CCDC115Q96NT0 MIR548AX-201ENST00000580117 73 ntBASIC-1.07□□□□□ -2.58
CCDC115Q96NT0 SNORA70.25-201ENST00000612741 95 ntBASIC-1.07□□□□□ -2.58
CCDC115Q96NT0 AC010205.1-201ENST00000616668 449 ntBASIC-1.07□□□□□ -2.58
CCDC115Q96NT0 MIR3674-201ENST00000636576 68 ntBASIC-1.07□□□□□ -2.58
CCDC115Q96NT0 SNORD113-6-201ENST00000363345 75 ntBASIC-1.08□□□□□ -2.58
CCDC115Q96NT0 SNORD113-7-201ENST00000363762 77 ntBASIC-1.08□□□□□ -2.58
CCDC115Q96NT0 RNU6-996P-201ENST00000365438 107 ntBASIC-1.08□□□□□ -2.58
CCDC115Q96NT0 SNORA72-201ENST00000384339 132 ntBASIC-1.08□□□□□ -2.58
CCDC115Q96NT0 RNU6-1001P-201ENST00000411265 100 ntBASIC-1.08□□□□□ -2.58
CCDC115Q96NT0 AL031667.1-201ENST00000440222 725 ntBASIC-1.08□□□□□ -2.58
CCDC115Q96NT0 AC073415.1-201ENST00000449240 153 ntBASIC-1.08□□□□□ -2.58
CCDC115Q96NT0 AL033528.1-201ENST00000453780 140 ntBASIC-1.08□□□□□ -2.58
CCDC115Q96NT0 AC107297.1-201ENST00000459991 176 ntBASIC-1.08□□□□□ -2.58
CCDC115Q96NT0 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC-1.08□□□□□ -2.58
CCDC115Q96NT0 RNU6-1332P-201ENST00000516666 104 ntBASIC-1.08□□□□□ -2.58
CCDC115Q96NT0 Z97988.1-201ENST00000637697 135 ntBASIC-1.08□□□□□ -2.58
CCDC115Q96NT0 MIR655-201ENST00000362159 97 ntBASIC-1.09□□□□□ -2.58
CCDC115Q96NT0 Y_RNA.13-201ENST00000362403 112 ntBASIC-1.09□□□□□ -2.58
CCDC115Q96NT0 Y_RNA.477-201ENST00000384352 108 ntBASIC-1.09□□□□□ -2.58
CCDC115Q96NT0 AC244250.2-201ENST00000418731 148 ntBASIC-1.09□□□□□ -2.58
CCDC115Q96NT0 RNU6-475P-201ENST00000516073 104 ntBASIC-1.09□□□□□ -2.58
CCDC115Q96NT0 AL590491.3-201ENST00000610731 82 ntBASIC-1.09□□□□□ -2.58
CCDC115Q96NT0 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC-1.09□□□□□ -2.58
CCDC115Q96NT0 RNU6-1322P-201ENST00000364309 107 ntBASIC-1.1□□□□□ -2.59
CCDC115Q96NT0 MIR635-201ENST00000384830 98 ntBASIC-1.1□□□□□ -2.59
CCDC115Q96NT0 SNORA40.3-201ENST00000390964 122 ntBASIC-1.1□□□□□ -2.59
CCDC115Q96NT0 BX295541.1-201ENST00000417774 250 ntBASIC-1.1□□□□□ -2.59
CCDC115Q96NT0 MTND2P18-201ENST00000419962 1030 ntBASIC-1.1□□□□□ -2.59
CCDC115Q96NT0 USP9YP16-201ENST00000430287 407 ntBASIC-1.1□□□□□ -2.59
CCDC115Q96NT0 USP9YP23-201ENST00000455085 407 ntBASIC-1.1□□□□□ -2.59
CCDC115Q96NT0 RNU7-187P-201ENST00000458985 68 ntBASIC-1.1□□□□□ -2.59
CCDC115Q96NT0 RNU7-67P-201ENST00000459003 62 ntBASIC-1.1□□□□□ -2.59
CCDC115Q96NT0 RNU7-63P-201ENST00000459054 62 ntBASIC-1.1□□□□□ -2.59
CCDC115Q96NT0 LRRC34P1-201ENST00000542742 915 ntBASIC-1.1□□□□□ -2.59
CCDC115Q96NT0 ELOCP32-201ENST00000548625 324 ntBASIC-1.1□□□□□ -2.59
CCDC115Q96NT0 POLR3GP2-201ENST00000588366 668 ntBASIC-1.1□□□□□ -2.59
CCDC115Q96NT0 POLR3GP1-201ENST00000594073 261 ntBASIC-1.1□□□□□ -2.59
CCDC115Q96NT0 MIR8055-201ENST00000610739 97 ntBASIC-1.1□□□□□ -2.59
CCDC115Q96NT0 AC073534.2-201ENST00000620377 381 ntBASIC-1.1□□□□□ -2.59
CCDC115Q96NT0 MIR101-2-201ENST00000362195 79 ntBASIC-1.11□□□□□ -2.59
CCDC115Q96NT0 Y_RNA.167-201ENST00000363735 109 ntBASIC-1.11□□□□□ -2.59
CCDC115Q96NT0 MTND3P23-201ENST00000431980 347 ntBASIC-1.11□□□□□ -2.59
CCDC115Q96NT0 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC-1.11□□□□□ -2.59
CCDC115Q96NT0 PCMTD1P1-201ENST00000455560 355 ntBASIC-1.11□□□□□ -2.59
CCDC115Q96NT0 RNU6-1038P-201ENST00000516516 104 ntBASIC-1.11□□□□□ -2.59
CCDC115Q96NT0 MIR6082-201ENST00000613604 109 ntBASIC-1.11□□□□□ -2.59
CCDC115Q96NT0 AL391262.2-201ENST00000622466 494 ntBASIC-1.11□□□□□ -2.59
CCDC115Q96NT0 SNORA22B-201ENST00000383876 138 ntBASIC-1.12□□□□□ -2.59
CCDC115Q96NT0 RNU6-1145P-201ENST00000384246 107 ntBASIC-1.12□□□□□ -2.59
CCDC115Q96NT0 RNU6-30P-201ENST00000384561 107 ntBASIC-1.12□□□□□ -2.59
CCDC115Q96NT0 Y_RNA.536-201ENST00000384621 113 ntBASIC-1.12□□□□□ -2.59
CCDC115Q96NT0 MTCO2P8-201ENST00000412213 658 ntBASIC-1.12□□□□□ -2.59
CCDC115Q96NT0 MTATP6P18-201ENST00000417994 673 ntBASIC-1.12□□□□□ -2.59
CCDC115Q96NT0 MTATP6P23-201ENST00000440153 476 ntBASIC-1.12□□□□□ -2.59
CCDC115Q96NT0 SNORA18.6-201ENST00000516792 115 ntBASIC-1.12□□□□□ -2.59
CCDC115Q96NT0 RNU6-765P-201ENST00000516916 99 ntBASIC-1.12□□□□□ -2.59
CCDC115Q96NT0 AC090616.2-202ENST00000584248 222 ntBASIC-1.12□□□□□ -2.59
CCDC115Q96NT0 AC092807.2-201ENST00000609367 243 ntBASIC-1.12□□□□□ -2.59
CCDC115Q96NT0 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC-1.12□□□□□ -2.59
CCDC115Q96NT0 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC-1.12□□□□□ -2.59
CCDC115Q96NT0 AC099654.12-201ENST00000639868 649 ntBASIC-1.12□□□□□ -2.59
CCDC115Q96NT0 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-1.13□□□□□ -2.59
CCDC115Q96NT0 Y_RNA.151-201ENST00000363566 112 ntBASIC-1.13□□□□□ -2.59
CCDC115Q96NT0 RNU6-291P-201ENST00000384720 107 ntBASIC-1.13□□□□□ -2.59
CCDC115Q96NT0 MIR876-201ENST00000401147 81 ntBASIC-1.13□□□□□ -2.59
CCDC115Q96NT0 FCF1P9-201ENST00000412546 282 ntBASIC-1.13□□□□□ -2.59
CCDC115Q96NT0 CYCSP46-201ENST00000423569 204 ntBASIC-1.13□□□□□ -2.59
CCDC115Q96NT0 MTCO1P20-201ENST00000425366 358 ntBASIC-1.13□□□□□ -2.59
CCDC115Q96NT0 USMG5P1-201ENST00000425964 177 ntBASIC-1.13□□□□□ -2.59
CCDC115Q96NT0 RNU6-625P-201ENST00000459412 107 ntBASIC-1.13□□□□□ -2.59
CCDC115Q96NT0 MTND2P31-201ENST00000512602 616 ntBASIC-1.13□□□□□ -2.59
CCDC115Q96NT0 MIR5696-201ENST00000578474 85 ntBASIC-1.13□□□□□ -2.59
CCDC115Q96NT0 AL391834.2-201ENST00000609982 546 ntBASIC-1.13□□□□□ -2.59
CCDC115Q96NT0 AL162376.1-201ENST00000624117 175 ntBASIC-1.13□□□□□ -2.59
CCDC115Q96NT0 SNORD114-14-201ENST00000362723 75 ntBASIC-1.14□□□□□ -2.59
CCDC115Q96NT0 RNU6-403P-201ENST00000363163 104 ntBASIC-1.14□□□□□ -2.59
CCDC115Q96NT0 SNORD115-30-201ENST00000364117 82 ntBASIC-1.14□□□□□ -2.59
CCDC115Q96NT0 RNA5SP205-201ENST00000364653 136 ntBASIC-1.14□□□□□ -2.59
CCDC115Q96NT0 Y_RNA.270-201ENST00000364693 104 ntBASIC-1.14□□□□□ -2.59
CCDC115Q96NT0 Y_RNA.405-201ENST00000383979 100 ntBASIC-1.14□□□□□ -2.59
CCDC115Q96NT0 Y_RNA.451-201ENST00000384200 100 ntBASIC-1.14□□□□□ -2.59
CCDC115Q96NT0 Y_RNA.524-201ENST00000384564 100 ntBASIC-1.14□□□□□ -2.59
CCDC115Q96NT0 Y_RNA.561-201ENST00000384694 100 ntBASIC-1.14□□□□□ -2.59
CCDC115Q96NT0 RNY1P7-201ENST00000384743 110 ntBASIC-1.14□□□□□ -2.59
CCDC115Q96NT0 RNA5SP118-201ENST00000410385 109 ntBASIC-1.14□□□□□ -2.59
CCDC115Q96NT0 RNU6-602P-201ENST00000411155 105 ntBASIC-1.14□□□□□ -2.59
CCDC115Q96NT0 RNU6-1199P-201ENST00000411249 104 ntBASIC-1.14□□□□□ -2.59
CCDC115Q96NT0 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC-1.14□□□□□ -2.59
CCDC115Q96NT0 RNU7-73P-201ENST00000458743 63 ntBASIC-1.14□□□□□ -2.59
CCDC115Q96NT0 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC-1.14□□□□□ -2.59
CCDC115Q96NT0 RNU6-958P-201ENST00000516995 106 ntBASIC-1.14□□□□□ -2.59
CCDC115Q96NT0 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC-1.14□□□□□ -2.59
CCDC115Q96NT0 MIR6507-201ENST00000613630 70 ntBASIC-1.14□□□□□ -2.59
CCDC115Q96NT0 AC005609.4-201ENST00000625071 447 ntBASIC-1.14□□□□□ -2.59
Retrieved 100 of 98,524 protein–RNA pairs in 85.3 ms