Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 Y_RNA.714-201ENST00000517065 90 ntBASIC2.04□□□□□ -2.08
CDK5RAP3Q96JB5 AC021506.2-201ENST00000612354 169 ntBASIC2.04□□□□□ -2.08
CDK5RAP3Q96JB5 RNU6-414P-201ENST00000363705 104 ntBASIC2.03□□□□□ -2.08
CDK5RAP3Q96JB5 MIR522-201ENST00000385071 87 ntBASIC2.03□□□□□ -2.08
CDK5RAP3Q96JB5 MIR30A-201ENST00000385092 71 ntBASIC2.03□□□□□ -2.08
CDK5RAP3Q96JB5 SNORA40.18-201ENST00000391200 128 ntBASIC2.03□□□□□ -2.08
CDK5RAP3Q96JB5 RNU6-381P-201ENST00000391259 108 ntBASIC2.03□□□□□ -2.08
CDK5RAP3Q96JB5 CALM2P4-201ENST00000430810 426 ntBASIC2.03□□□□□ -2.08
CDK5RAP3Q96JB5 AC023449.1-201ENST00000454464 154 ntBASIC2.03□□□□□ -2.08
CDK5RAP3Q96JB5 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
CDK5RAP3Q96JB5 MIR4419B-201ENST00000577260 68 ntBASIC2.03□□□□□ -2.08
CDK5RAP3Q96JB5 MIR4308-201ENST00000580634 81 ntBASIC2.03□□□□□ -2.08
CDK5RAP3Q96JB5 AL049861.1-201ENST00000603130 150 ntBASIC2.03□□□□□ -2.08
CDK5RAP3Q96JB5 Z83818.1-201ENST00000603584 150 ntBASIC2.03□□□□□ -2.08
CDK5RAP3Q96JB5 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC2.03□□□□□ -2.08
CDK5RAP3Q96JB5 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.03□□□□□ -2.08
CDK5RAP3Q96JB5 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
CDK5RAP3Q96JB5 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
CDK5RAP3Q96JB5 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
CDK5RAP3Q96JB5 RN7SKP101-201ENST00000411376 320 ntBASIC2.02□□□□□ -2.09
CDK5RAP3Q96JB5 FTH1P12-201ENST00000432137 551 ntBASIC2.02□□□□□ -2.09
CDK5RAP3Q96JB5 Y_RNA.644-201ENST00000459006 113 ntBASIC2.02□□□□□ -2.09
CDK5RAP3Q96JB5 AC099513.1-201ENST00000490423 301 ntBASIC2.02□□□□□ -2.09
CDK5RAP3Q96JB5 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC2.02□□□□□ -2.09
CDK5RAP3Q96JB5 AC008834.1-201ENST00000511612 175 ntBASIC2.02□□□□□ -2.09
CDK5RAP3Q96JB5 Y_RNA.674-201ENST00000516362 113 ntBASIC2.02□□□□□ -2.09
CDK5RAP3Q96JB5 MIR3198-2-201ENST00000577868 80 ntBASIC2.02□□□□□ -2.09
CDK5RAP3Q96JB5 MIR3945-201ENST00000581853 98 ntBASIC2.02□□□□□ -2.09
CDK5RAP3Q96JB5 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC2.01□□□□□ -2.09
CDK5RAP3Q96JB5 MIR424-201ENST00000362227 98 ntBASIC2.01□□□□□ -2.09
CDK5RAP3Q96JB5 RNU6-1020P-201ENST00000363684 107 ntBASIC2.01□□□□□ -2.09
CDK5RAP3Q96JB5 RNU6-47P-201ENST00000383866 107 ntBASIC2.01□□□□□ -2.09
CDK5RAP3Q96JB5 MT-TT-201ENST00000387460 66 ntBASIC2.01□□□□□ -2.09
CDK5RAP3Q96JB5 Y_RNA.587-201ENST00000391210 103 ntBASIC2.01□□□□□ -2.09
CDK5RAP3Q96JB5 U8.16-201ENST00000391279 133 ntBASIC2.01□□□□□ -2.09
CDK5RAP3Q96JB5 MTND5P15-201ENST00000434246 349 ntBASIC2.01□□□□□ -2.09
CDK5RAP3Q96JB5 AL138752.1-201ENST00000452964 351 ntBASIC2.01□□□□□ -2.09
CDK5RAP3Q96JB5 SNORD11-201ENST00000459124 84 ntBASIC2.01□□□□□ -2.09
CDK5RAP3Q96JB5 RN7SL429P-201ENST00000479090 223 ntBASIC2.01□□□□□ -2.09
CDK5RAP3Q96JB5 RN7SL489P-201ENST00000486185 223 ntBASIC2.01□□□□□ -2.09
CDK5RAP3Q96JB5 RN7SL327P-201ENST00000488659 223 ntBASIC2.01□□□□□ -2.09
CDK5RAP3Q96JB5 NDUFA4P2-201ENST00000489989 244 ntBASIC2.01□□□□□ -2.09
CDK5RAP3Q96JB5 SCARNA8-201ENST00000515924 131 ntBASIC2.01□□□□□ -2.09
CDK5RAP3Q96JB5 RN7SKP164-201ENST00000516138 266 ntBASIC2.01□□□□□ -2.09
CDK5RAP3Q96JB5 RNU6-1007P-201ENST00000516586 107 ntBASIC2.01□□□□□ -2.09
CDK5RAP3Q96JB5 RNA5SP168-201ENST00000516642 112 ntBASIC2.01□□□□□ -2.09
CDK5RAP3Q96JB5 RNU6-453P-201ENST00000516819 85 ntBASIC2.01□□□□□ -2.09
CDK5RAP3Q96JB5 RNU6-1116P-201ENST00000517269 99 ntBASIC2.01□□□□□ -2.09
CDK5RAP3Q96JB5 MIR3618-201ENST00000580330 88 ntBASIC2.01□□□□□ -2.09
CDK5RAP3Q96JB5 AL021707.8-201ENST00000609428 183 ntBASIC2.01□□□□□ -2.09
CDK5RAP3Q96JB5 MIR8074-201ENST00000615081 81 ntBASIC2.01□□□□□ -2.09
CDK5RAP3Q96JB5 RN7SL853P-201ENST00000617250 223 ntBASIC2.01□□□□□ -2.09
CDK5RAP3Q96JB5 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
CDK5RAP3Q96JB5 RNU6-1084P-201ENST00000362498 107 ntBASIC2□□□□□ -2.09
CDK5RAP3Q96JB5 U8.5-201ENST00000364528 136 ntBASIC2□□□□□ -2.09
CDK5RAP3Q96JB5 RNU6-203P-201ENST00000384038 104 ntBASIC2□□□□□ -2.09
CDK5RAP3Q96JB5 MIR9-3-201ENST00000385084 90 ntBASIC2□□□□□ -2.09
CDK5RAP3Q96JB5 MIR616-201ENST00000385293 97 ntBASIC2□□□□□ -2.09
CDK5RAP3Q96JB5 Y_RNA.793-201ENST00000411222 111 ntBASIC2□□□□□ -2.09
CDK5RAP3Q96JB5 MIR3122-201ENST00000577243 73 ntBASIC2□□□□□ -2.09
CDK5RAP3Q96JB5 MIR4762-201ENST00000585261 75 ntBASIC2□□□□□ -2.09
CDK5RAP3Q96JB5 RNU2-4P-201ENST00000606190 192 ntBASIC2□□□□□ -2.09
CDK5RAP3Q96JB5 MIRLET7C-201ENST00000362160 84 ntBASIC1.99□□□□□ -2.09
CDK5RAP3Q96JB5 Y_RNA.7-201ENST00000362352 102 ntBASIC1.99□□□□□ -2.09
CDK5RAP3Q96JB5 RNU6-424P-201ENST00000384367 105 ntBASIC1.99□□□□□ -2.09
CDK5RAP3Q96JB5 RNU6-163P-201ENST00000384396 106 ntBASIC1.99□□□□□ -2.09
CDK5RAP3Q96JB5 RNU6-918P-201ENST00000391219 106 ntBASIC1.99□□□□□ -2.09
CDK5RAP3Q96JB5 PIGPP3-201ENST00000425307 415 ntBASIC1.99□□□□□ -2.09
CDK5RAP3Q96JB5 PGBD4P5-201ENST00000445958 426 ntBASIC1.99□□□□□ -2.09
CDK5RAP3Q96JB5 RPS29P11-201ENST00000496507 171 ntBASIC1.99□□□□□ -2.09
CDK5RAP3Q96JB5 CBX3P4-201ENST00000538909 354 ntBASIC1.99□□□□□ -2.09
CDK5RAP3Q96JB5 MIR3668-201ENST00000582138 75 ntBASIC1.99□□□□□ -2.09
CDK5RAP3Q96JB5 AC120024.3-201ENST00000603167 156 ntBASIC1.99□□□□□ -2.09
CDK5RAP3Q96JB5 uc_338.4-201ENST00000616635 176 ntBASIC1.99□□□□□ -2.09
CDK5RAP3Q96JB5 AC095038.3-201ENST00000634439 195 ntBASIC1.99□□□□□ -2.09
CDK5RAP3Q96JB5 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.99□□□□□ -2.09
CDK5RAP3Q96JB5 Y_RNA.29-201ENST00000362570 113 ntBASIC1.98□□□□□ -2.09
CDK5RAP3Q96JB5 Y_RNA.238-201ENST00000364441 102 ntBASIC1.98□□□□□ -2.09
CDK5RAP3Q96JB5 Y_RNA.571-201ENST00000384753 98 ntBASIC1.98□□□□□ -2.09
CDK5RAP3Q96JB5 AL606845.1-201ENST00000404881 255 ntBASIC1.98□□□□□ -2.09
CDK5RAP3Q96JB5 RPL30P13-201ENST00000418873 348 ntBASIC1.98□□□□□ -2.09
CDK5RAP3Q96JB5 JTBP1-201ENST00000441314 247 ntBASIC1.98□□□□□ -2.09
CDK5RAP3Q96JB5 AC005908.1-201ENST00000468701 347 ntBASIC1.98□□□□□ -2.09
CDK5RAP3Q96JB5 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.98□□□□□ -2.09
CDK5RAP3Q96JB5 RNU7-12P-201ENST00000516030 62 ntBASIC1.98□□□□□ -2.09
CDK5RAP3Q96JB5 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.98□□□□□ -2.09
CDK5RAP3Q96JB5 SNORA81.3-201ENST00000517283 198 ntBASIC1.98□□□□□ -2.09
CDK5RAP3Q96JB5 AC024614.2-201ENST00000577584 372 ntBASIC1.98□□□□□ -2.09
CDK5RAP3Q96JB5 AL513423.1-201ENST00000621695 132 ntBASIC1.98□□□□□ -2.09
CDK5RAP3Q96JB5 AC084768.2-201ENST00000622736 221 ntBASIC1.98□□□□□ -2.09
CDK5RAP3Q96JB5 SNORD3E-202ENST00000627253 216 ntBASIC1.98□□□□□ -2.09
CDK5RAP3Q96JB5 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.98□□□□□ -2.09
CDK5RAP3Q96JB5 RNU6-103P-201ENST00000363686 107 ntBASIC1.97□□□□□ -2.09
CDK5RAP3Q96JB5 SNORD50B-201ENST00000364995 70 ntBASIC1.97□□□□□ -2.09
CDK5RAP3Q96JB5 snoU2-30.1-201ENST00000365012 70 ntBASIC1.97□□□□□ -2.09
CDK5RAP3Q96JB5 RNU4-70P-201ENST00000384579 139 ntBASIC1.97□□□□□ -2.09
CDK5RAP3Q96JB5 MIR1267-201ENST00000408723 78 ntBASIC1.97□□□□□ -2.09
CDK5RAP3Q96JB5 CYCTP-201ENST00000504253 315 ntBASIC1.97□□□□□ -2.09
CDK5RAP3Q96JB5 AC114811.1-201ENST00000507207 168 ntBASIC1.97□□□□□ -2.09
CDK5RAP3Q96JB5 SNORD45.4-201ENST00000516629 73 ntBASIC1.97□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 161.7 ms