Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 SNORD2.1-201ENST00000458762 69 ntBASIC1.37□□□□□ -2.19
PDLIM5Q96HC4 AL358944.1-201ENST00000528537 144 ntBASIC1.37□□□□□ -2.19
PDLIM5Q96HC4 AC011604.1-201ENST00000545978 196 ntBASIC1.37□□□□□ -2.19
PDLIM5Q96HC4 MIR5692C2-201ENST00000577959 77 ntBASIC1.37□□□□□ -2.19
PDLIM5Q96HC4 AL162424.1-201ENST00000602325 221 ntBASIC1.37□□□□□ -2.19
PDLIM5Q96HC4 AC011921.3-201ENST00000605540 361 ntBASIC1.37□□□□□ -2.19
PDLIM5Q96HC4 AC013791.1-201ENST00000616619 62 ntBASIC1.37□□□□□ -2.19
PDLIM5Q96HC4 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC1.37□□□□□ -2.19
PDLIM5Q96HC4 RNU6-899P-201ENST00000363947 107 ntBASIC1.36□□□□□ -2.19
PDLIM5Q96HC4 Y_RNA.267-201ENST00000364679 109 ntBASIC1.36□□□□□ -2.19
PDLIM5Q96HC4 Y_RNA.401-201ENST00000383965 117 ntBASIC1.36□□□□□ -2.19
PDLIM5Q96HC4 RNU6-211P-201ENST00000384047 107 ntBASIC1.36□□□□□ -2.19
PDLIM5Q96HC4 RNU6-1031P-201ENST00000384773 107 ntBASIC1.36□□□□□ -2.19
PDLIM5Q96HC4 MT-TG-201ENST00000387429 68 ntBASIC1.36□□□□□ -2.19
PDLIM5Q96HC4 MTCO2P33-201ENST00000402100 465 ntBASIC1.36□□□□□ -2.19
PDLIM5Q96HC4 AL034345.1-201ENST00000407768 123 ntBASIC1.36□□□□□ -2.19
PDLIM5Q96HC4 SNORA36B-201ENST00000410438 131 ntBASIC1.36□□□□□ -2.19
PDLIM5Q96HC4 Z98949.2-201ENST00000440996 144 ntBASIC1.36□□□□□ -2.19
PDLIM5Q96HC4 RNU6-1023P-201ENST00000516137 106 ntBASIC1.36□□□□□ -2.19
PDLIM5Q96HC4 RNU7-116P-201ENST00000516940 62 ntBASIC1.36□□□□□ -2.19
PDLIM5Q96HC4 AC127455.1-201ENST00000565496 145 ntBASIC1.36□□□□□ -2.19
PDLIM5Q96HC4 AL365434.2-201ENST00000607979 234 ntBASIC1.36□□□□□ -2.19
PDLIM5Q96HC4 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC1.36□□□□□ -2.19
PDLIM5Q96HC4 MIR548AY-201ENST00000617669 107 ntBASIC1.36□□□□□ -2.19
PDLIM5Q96HC4 RNU6-1080P-201ENST00000383982 107 ntBASIC1.35□□□□□ -2.19
PDLIM5Q96HC4 Y_RNA.478-201ENST00000384358 107 ntBASIC1.35□□□□□ -2.19
PDLIM5Q96HC4 MIR758-201ENST00000390227 88 ntBASIC1.35□□□□□ -2.19
PDLIM5Q96HC4 MIR548H3-201ENST00000408771 118 ntBASIC1.35□□□□□ -2.19
PDLIM5Q96HC4 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.35□□□□□ -2.19
PDLIM5Q96HC4 BTF3P11-201ENST00000426582 477 ntBASIC1.35□□□□□ -2.19
PDLIM5Q96HC4 AL591806.2-201ENST00000433122 173 ntBASIC1.35□□□□□ -2.19
PDLIM5Q96HC4 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC1.35□□□□□ -2.19
PDLIM5Q96HC4 AC233266.1-201ENST00000454518 96 ntBASIC1.35□□□□□ -2.19
PDLIM5Q96HC4 AL049830.1-201ENST00000468034 425 ntBASIC1.35□□□□□ -2.19
PDLIM5Q96HC4 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC1.35□□□□□ -2.19
PDLIM5Q96HC4 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC1.35□□□□□ -2.19
PDLIM5Q96HC4 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC1.35□□□□□ -2.19
PDLIM5Q96HC4 BX284668.6-201ENST00000606899 438 ntBASIC1.35□□□□□ -2.19
PDLIM5Q96HC4 AC242852.1-201ENST00000612151 96 ntBASIC1.35□□□□□ -2.19
PDLIM5Q96HC4 AC244015.1-201ENST00000622301 99 ntBASIC1.35□□□□□ -2.19
PDLIM5Q96HC4 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.35□□□□□ -2.19
PDLIM5Q96HC4 Y_RNA.54-201ENST00000362766 105 ntBASIC1.34□□□□□ -2.19
PDLIM5Q96HC4 Y_RNA.60-201ENST00000362831 98 ntBASIC1.34□□□□□ -2.19
PDLIM5Q96HC4 RNU1-17P-201ENST00000363022 152 ntBASIC1.34□□□□□ -2.19
PDLIM5Q96HC4 RNU6-674P-201ENST00000363831 107 ntBASIC1.34□□□□□ -2.19
PDLIM5Q96HC4 Y_RNA.188-201ENST00000363952 111 ntBASIC1.34□□□□□ -2.19
PDLIM5Q96HC4 SNORD27-201ENST00000363981 72 ntBASIC1.34□□□□□ -2.19
PDLIM5Q96HC4 RNU4-41P-201ENST00000364426 143 ntBASIC1.34□□□□□ -2.19
PDLIM5Q96HC4 Y_RNA.269-201ENST00000364685 89 ntBASIC1.34□□□□□ -2.19
PDLIM5Q96HC4 MIR562-201ENST00000384894 95 ntBASIC1.34□□□□□ -2.19
PDLIM5Q96HC4 MIR150-201ENST00000385048 84 ntBASIC1.34□□□□□ -2.19
PDLIM5Q96HC4 OR9P1P-201ENST00000496431 281 ntBASIC1.34□□□□□ -2.19
PDLIM5Q96HC4 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.34□□□□□ -2.19
PDLIM5Q96HC4 RNU6-111P-201ENST00000517179 105 ntBASIC1.34□□□□□ -2.19
PDLIM5Q96HC4 AP002004.2-201ENST00000531656 154 ntBASIC1.34□□□□□ -2.19
PDLIM5Q96HC4 AL512310.8-201ENST00000550183 120 ntBASIC1.34□□□□□ -2.19
PDLIM5Q96HC4 AL160236.1-201ENST00000556317 195 ntBASIC1.34□□□□□ -2.19
PDLIM5Q96HC4 AC019288.1-201ENST00000557918 224 ntBASIC1.34□□□□□ -2.19
PDLIM5Q96HC4 MIR4298-201ENST00000584380 73 ntBASIC1.34□□□□□ -2.19
PDLIM5Q96HC4 AC006006.1-201ENST00000603082 144 ntBASIC1.34□□□□□ -2.19
PDLIM5Q96HC4 AP000942.4-201ENST00000604811 241 ntBASIC1.34□□□□□ -2.19
PDLIM5Q96HC4 AC021506.2-201ENST00000612354 169 ntBASIC1.34□□□□□ -2.19
PDLIM5Q96HC4 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.34□□□□□ -2.2
PDLIM5Q96HC4 RNU6-379P-201ENST00000363813 104 ntBASIC1.33□□□□□ -2.2
PDLIM5Q96HC4 RNU6-144P-201ENST00000383951 107 ntBASIC1.33□□□□□ -2.2
PDLIM5Q96HC4 RNU6-939P-201ENST00000384634 107 ntBASIC1.33□□□□□ -2.2
PDLIM5Q96HC4 Y_RNA.618-201ENST00000410949 107 ntBASIC1.33□□□□□ -2.2
PDLIM5Q96HC4 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.33□□□□□ -2.2
PDLIM5Q96HC4 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.33□□□□□ -2.2
PDLIM5Q96HC4 Y_RNA.638-201ENST00000459374 113 ntBASIC1.33□□□□□ -2.2
PDLIM5Q96HC4 RPL23AP54-201ENST00000495129 419 ntBASIC1.33□□□□□ -2.2
PDLIM5Q96HC4 SNORD116-28-201ENST00000516123 91 ntBASIC1.33□□□□□ -2.2
PDLIM5Q96HC4 RN7SKP88-201ENST00000516847 250 ntBASIC1.33□□□□□ -2.2
PDLIM5Q96HC4 RNU6-1271P-201ENST00000517049 105 ntBASIC1.33□□□□□ -2.2
PDLIM5Q96HC4 SUMO2P16-201ENST00000519475 264 ntBASIC1.33□□□□□ -2.2
PDLIM5Q96HC4 CYP3A52P-201ENST00000563326 91 ntBASIC1.33□□□□□ -2.2
PDLIM5Q96HC4 MIR4303-201ENST00000581299 66 ntBASIC1.33□□□□□ -2.2
PDLIM5Q96HC4 AC005357.1-201ENST00000588399 301 ntBASIC1.33□□□□□ -2.2
PDLIM5Q96HC4 SNORA28-201ENST00000606769 126 ntBASIC1.33□□□□□ -2.2
PDLIM5Q96HC4 7SK.8-201ENST00000612110 250 ntBASIC1.33□□□□□ -2.2
PDLIM5Q96HC4 7SK.11-201ENST00000615477 250 ntBASIC1.33□□□□□ -2.2
PDLIM5Q96HC4 7SK.13-201ENST00000622040 250 ntBASIC1.33□□□□□ -2.2
PDLIM5Q96HC4 ZNF209P-201ENST00000593450 2304 ntBASIC1.32□□□□□ -2.2
PDLIM5Q96HC4 Y_RNA.65-201ENST00000362846 100 ntBASIC1.32□□□□□ -2.2
PDLIM5Q96HC4 Y_RNA.203-201ENST00000364106 102 ntBASIC1.32□□□□□ -2.2
PDLIM5Q96HC4 SNORA20.1-201ENST00000364790 130 ntBASIC1.32□□□□□ -2.2
PDLIM5Q96HC4 Y_RNA.292-201ENST00000364904 97 ntBASIC1.32□□□□□ -2.2
PDLIM5Q96HC4 RNY4P28-201ENST00000365281 93 ntBASIC1.32□□□□□ -2.2
PDLIM5Q96HC4 MIR1278-201ENST00000408753 81 ntBASIC1.32□□□□□ -2.2
PDLIM5Q96HC4 Y_RNA.590-201ENST00000410140 107 ntBASIC1.32□□□□□ -2.2
PDLIM5Q96HC4 RNU6-955P-201ENST00000410497 104 ntBASIC1.32□□□□□ -2.2
PDLIM5Q96HC4 snoU13.23-201ENST00000458863 104 ntBASIC1.32□□□□□ -2.2
PDLIM5Q96HC4 RNU6-437P-201ENST00000459408 95 ntBASIC1.32□□□□□ -2.2
PDLIM5Q96HC4 RNU7-28P-201ENST00000516759 62 ntBASIC1.32□□□□□ -2.2
PDLIM5Q96HC4 AL591926.4-201ENST00000616895 298 ntBASIC1.32□□□□□ -2.2
PDLIM5Q96HC4 AC073349.3-201ENST00000617616 186 ntBASIC1.32□□□□□ -2.2
PDLIM5Q96HC4 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.31□□□□□ -2.2
PDLIM5Q96HC4 MIRLET7C-201ENST00000362160 84 ntBASIC1.31□□□□□ -2.2
PDLIM5Q96HC4 RNU6-1205P-201ENST00000363625 106 ntBASIC1.31□□□□□ -2.2
PDLIM5Q96HC4 RNY1-201ENST00000364228 113 ntBASIC1.31□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 130.8 ms