Protein–RNA interactions for Protein: Q96DD7

SHISA4, Protein shisa-4, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA4Q96DD7 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.81□□□□□ -1.96
SHISA4Q96DD7 MIR7515-201ENST00000637837 67 ntBASIC2.81□□□□□ -1.96
SHISA4Q96DD7 AC016717.2-201ENST00000609089 5141 ntBASIC2.81□□□□□ -1.96
SHISA4Q96DD7 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.81□□□□□ -1.96
SHISA4Q96DD7 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
SHISA4Q96DD7 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
SHISA4Q96DD7 Y_RNA.116-201ENST00000363292 103 ntBASIC2.8□□□□□ -1.96
SHISA4Q96DD7 RNU1-96P-201ENST00000364163 162 ntBASIC2.8□□□□□ -1.96
SHISA4Q96DD7 Y_RNA.332-201ENST00000365271 113 ntBASIC2.8□□□□□ -1.96
SHISA4Q96DD7 AL359511.1-201ENST00000402970 211 ntBASIC2.8□□□□□ -1.96
SHISA4Q96DD7 RNU6-1186P-201ENST00000410429 97 ntBASIC2.8□□□□□ -1.96
SHISA4Q96DD7 AC233266.1-201ENST00000454518 96 ntBASIC2.8□□□□□ -1.96
SHISA4Q96DD7 NDUFA4P2-201ENST00000489989 244 ntBASIC2.8□□□□□ -1.96
SHISA4Q96DD7 MRPS17P9-201ENST00000511924 393 ntBASIC2.8□□□□□ -1.96
SHISA4Q96DD7 RNU7-99P-201ENST00000516271 62 ntBASIC2.8□□□□□ -1.96
SHISA4Q96DD7 RNA5SP281-201ENST00000516504 135 ntBASIC2.8□□□□□ -1.96
SHISA4Q96DD7 RNU6-113P-201ENST00000516653 101 ntBASIC2.8□□□□□ -1.96
SHISA4Q96DD7 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC2.8□□□□□ -1.96
SHISA4Q96DD7 AC007229.1-201ENST00000590455 412 ntBASIC2.8□□□□□ -1.96
SHISA4Q96DD7 AP000942.3-201ENST00000603702 160 ntBASIC2.8□□□□□ -1.96
SHISA4Q96DD7 AC103810.6-201ENST00000606708 136 ntBASIC2.8□□□□□ -1.96
SHISA4Q96DD7 AC242852.1-201ENST00000612151 96 ntBASIC2.8□□□□□ -1.96
SHISA4Q96DD7 AC244015.1-201ENST00000622301 99 ntBASIC2.8□□□□□ -1.96
SHISA4Q96DD7 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC2.8□□□□□ -1.96
SHISA4Q96DD7 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.79□□□□□ -1.96
SHISA4Q96DD7 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
SHISA4Q96DD7 Y_RNA.140-201ENST00000363474 103 ntBASIC2.79□□□□□ -1.96
SHISA4Q96DD7 U8.9-201ENST00000365667 134 ntBASIC2.79□□□□□ -1.96
SHISA4Q96DD7 SNORD24-201ENST00000383884 75 ntBASIC2.79□□□□□ -1.96
SHISA4Q96DD7 SNORA1-201ENST00000384107 130 ntBASIC2.79□□□□□ -1.96
SHISA4Q96DD7 SNRPGP10-201ENST00000432323 225 ntBASIC2.79□□□□□ -1.96
SHISA4Q96DD7 SEM1P1-201ENST00000506694 209 ntBASIC2.79□□□□□ -1.96
SHISA4Q96DD7 Y_RNA.714-201ENST00000517065 90 ntBASIC2.79□□□□□ -1.96
SHISA4Q96DD7 AC018630.2-201ENST00000534866 2403 ntBASIC2.78□□□□□ -1.96
SHISA4Q96DD7 MIR450A1-201ENST00000362262 91 ntBASIC2.78□□□□□ -1.96
SHISA4Q96DD7 SNORD61-201ENST00000384252 73 ntBASIC2.78□□□□□ -1.96
SHISA4Q96DD7 Y_RNA.528-201ENST00000384575 108 ntBASIC2.78□□□□□ -1.96
SHISA4Q96DD7 MIR95-201ENST00000385072 81 ntBASIC2.78□□□□□ -1.96
SHISA4Q96DD7 RNA5SP136-201ENST00000410906 107 ntBASIC2.78□□□□□ -1.96
SHISA4Q96DD7 RNU6-1328P-201ENST00000410938 106 ntBASIC2.78□□□□□ -1.96
SHISA4Q96DD7 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.78□□□□□ -1.96
SHISA4Q96DD7 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.78□□□□□ -1.96
SHISA4Q96DD7 AC060773.1-201ENST00000421698 310 ntBASIC2.78□□□□□ -1.96
SHISA4Q96DD7 IGHVIII-67-2-201ENST00000519849 88 ntBASIC2.78□□□□□ -1.96
SHISA4Q96DD7 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
SHISA4Q96DD7 RNU6-888P-201ENST00000363010 101 ntBASIC2.77□□□□□ -1.97
SHISA4Q96DD7 Y_RNA.253-201ENST00000364562 112 ntBASIC2.77□□□□□ -1.97
SHISA4Q96DD7 AC026436.1-201ENST00000510537 270 ntBASIC2.77□□□□□ -1.97
SHISA4Q96DD7 RNA5SP236-201ENST00000516169 116 ntBASIC2.77□□□□□ -1.97
SHISA4Q96DD7 Y_RNA.677-201ENST00000516401 85 ntBASIC2.77□□□□□ -1.97
SHISA4Q96DD7 RNU6-1270P-201ENST00000517128 108 ntBASIC2.77□□□□□ -1.97
SHISA4Q96DD7 RNU6-537P-201ENST00000517277 103 ntBASIC2.77□□□□□ -1.97
SHISA4Q96DD7 AC087685.1-201ENST00000587507 141 ntBASIC2.77□□□□□ -1.97
SHISA4Q96DD7 AC067747.1-201ENST00000608026 250 ntBASIC2.77□□□□□ -1.97
SHISA4Q96DD7 uc_338.28-201ENST00000612082 187 ntBASIC2.77□□□□□ -1.97
SHISA4Q96DD7 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.77□□□□□ -1.97
SHISA4Q96DD7 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
SHISA4Q96DD7 snoU2-30.2-201ENST00000362805 70 ntBASIC2.76□□□□□ -1.97
SHISA4Q96DD7 Y_RNA.281-201ENST00000364774 94 ntBASIC2.76□□□□□ -1.97
SHISA4Q96DD7 RNA5SP125-201ENST00000364843 120 ntBASIC2.76□□□□□ -1.97
SHISA4Q96DD7 SNORA12.1-201ENST00000390873 148 ntBASIC2.76□□□□□ -1.97
SHISA4Q96DD7 AC011406.1-201ENST00000512440 370 ntBASIC2.76□□□□□ -1.97
SHISA4Q96DD7 RNU6-693P-201ENST00000516134 107 ntBASIC2.76□□□□□ -1.97
SHISA4Q96DD7 SNORA48.11-201ENST00000517015 89 ntBASIC2.76□□□□□ -1.97
SHISA4Q96DD7 IGKV1-22-201ENST00000524313 326 ntBASIC2.76□□□□□ -1.97
SHISA4Q96DD7 AL358944.1-201ENST00000528537 144 ntBASIC2.76□□□□□ -1.97
SHISA4Q96DD7 MIR4498-201ENST00000577599 66 ntBASIC2.76□□□□□ -1.97
SHISA4Q96DD7 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC2.76□□□□□ -1.97
SHISA4Q96DD7 AC008507.4-201ENST00000585464 127 ntBASIC2.76□□□□□ -1.97
SHISA4Q96DD7 AL356280.1-201ENST00000603614 379 ntBASIC2.76□□□□□ -1.97
SHISA4Q96DD7 AL359075.3-201ENST00000613288 217 ntBASIC2.76□□□□□ -1.97
SHISA4Q96DD7 AC106754.2-201ENST00000623006 233 ntBASIC2.76□□□□□ -1.97
SHISA4Q96DD7 Y_RNA.118-201ENST00000363300 101 ntBASIC2.75□□□□□ -1.97
SHISA4Q96DD7 RNU2-63P-201ENST00000410792 194 ntBASIC2.75□□□□□ -1.97
SHISA4Q96DD7 SNRPGP13-201ENST00000442212 177 ntBASIC2.75□□□□□ -1.97
SHISA4Q96DD7 RNU6-1291P-201ENST00000516591 104 ntBASIC2.75□□□□□ -1.97
SHISA4Q96DD7 RNU6-1149P-201ENST00000516810 97 ntBASIC2.75□□□□□ -1.97
SHISA4Q96DD7 RNU6-341P-201ENST00000516973 96 ntBASIC2.75□□□□□ -1.97
SHISA4Q96DD7 AC007012.1-201ENST00000567192 175 ntBASIC2.75□□□□□ -1.97
SHISA4Q96DD7 MIR1291-201ENST00000627649 87 ntBASIC2.75□□□□□ -1.97
SHISA4Q96DD7 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.75□□□□□ -1.97
SHISA4Q96DD7 RNU1-23P-201ENST00000363361 144 ntBASIC2.74□□□□□ -1.97
SHISA4Q96DD7 RNU6-1107P-201ENST00000364817 104 ntBASIC2.74□□□□□ -1.97
SHISA4Q96DD7 Y_RNA.369-201ENST00000365568 117 ntBASIC2.74□□□□□ -1.97
SHISA4Q96DD7 RNU6-106P-201ENST00000384405 107 ntBASIC2.74□□□□□ -1.97
SHISA4Q96DD7 MIR570-201ENST00000384917 97 ntBASIC2.74□□□□□ -1.97
SHISA4Q96DD7 SNORD72-201ENST00000390994 80 ntBASIC2.74□□□□□ -1.97
SHISA4Q96DD7 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.74□□□□□ -1.97
SHISA4Q96DD7 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC2.74□□□□□ -1.97
SHISA4Q96DD7 RNA5SP445-201ENST00000515889 115 ntBASIC2.74□□□□□ -1.97
SHISA4Q96DD7 Y_RNA.666-201ENST00000516187 112 ntBASIC2.74□□□□□ -1.97
SHISA4Q96DD7 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC2.74□□□□□ -1.97
SHISA4Q96DD7 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC2.74□□□□□ -1.97
SHISA4Q96DD7 AL137067.1-201ENST00000615933 120 ntBASIC2.74□□□□□ -1.97
SHISA4Q96DD7 MIR6079-201ENST00000635807 62 ntBASIC2.74□□□□□ -1.97
SHISA4Q96DD7 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
SHISA4Q96DD7 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.74□□□□□ -1.97
SHISA4Q96DD7 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.73□□□□□ -1.97
SHISA4Q96DD7 MIR126-201ENST00000362291 85 ntBASIC2.73□□□□□ -1.97
SHISA4Q96DD7 SNORA68.1-201ENST00000364537 132 ntBASIC2.73□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 147.4 ms