Protein–RNA interactions for Protein: Q96B97

SH3KBP1, SH3 domain-containing kinase-binding protein 1, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3KBP1Q96B97 Y_RNA.477-201ENST00000384352 108 ntBASIC1.66□□□□□ -2.14
SH3KBP1Q96B97 RNU6-424P-201ENST00000384367 105 ntBASIC1.66□□□□□ -2.14
SH3KBP1Q96B97 RNU6-163P-201ENST00000384396 106 ntBASIC1.66□□□□□ -2.14
SH3KBP1Q96B97 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC1.66□□□□□ -2.14
SH3KBP1Q96B97 HMGN1P7-201ENST00000491722 313 ntBASIC1.66□□□□□ -2.14
SH3KBP1Q96B97 RNU6-902P-201ENST00000517212 91 ntBASIC1.66□□□□□ -2.14
SH3KBP1Q96B97 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.66□□□□□ -2.14
SH3KBP1Q96B97 AL162730.1-201ENST00000605734 292 ntBASIC1.66□□□□□ -2.14
SH3KBP1Q96B97 AL008718.3-201ENST00000610217 321 ntBASIC1.66□□□□□ -2.14
SH3KBP1Q96B97 AL513423.1-201ENST00000621695 132 ntBASIC1.66□□□□□ -2.14
SH3KBP1Q96B97 Y_RNA.217-201ENST00000364214 105 ntBASIC1.65□□□□□ -2.15
SH3KBP1Q96B97 Y_RNA.275-201ENST00000364726 110 ntBASIC1.65□□□□□ -2.15
SH3KBP1Q96B97 Y_RNA.277-201ENST00000364754 102 ntBASIC1.65□□□□□ -2.15
SH3KBP1Q96B97 SNORD1A-201ENST00000364968 72 ntBASIC1.65□□□□□ -2.15
SH3KBP1Q96B97 RNU6-196P-201ENST00000384315 107 ntBASIC1.65□□□□□ -2.15
SH3KBP1Q96B97 MIR660-201ENST00000385235 97 ntBASIC1.65□□□□□ -2.15
SH3KBP1Q96B97 RN7SKP51-201ENST00000410781 304 ntBASIC1.65□□□□□ -2.15
SH3KBP1Q96B97 RPL30P13-201ENST00000418873 348 ntBASIC1.65□□□□□ -2.15
SH3KBP1Q96B97 SNORD127-201ENST00000458892 86 ntBASIC1.65□□□□□ -2.15
SH3KBP1Q96B97 RNU6-437P-201ENST00000459408 95 ntBASIC1.65□□□□□ -2.15
SH3KBP1Q96B97 Y_RNA.641-201ENST00000459414 105 ntBASIC1.65□□□□□ -2.15
SH3KBP1Q96B97 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC1.65□□□□□ -2.15
SH3KBP1Q96B97 AC114811.1-201ENST00000507207 168 ntBASIC1.65□□□□□ -2.15
SH3KBP1Q96B97 MIR5692C2-201ENST00000577959 77 ntBASIC1.65□□□□□ -2.15
SH3KBP1Q96B97 MIR4503-201ENST00000582187 83 ntBASIC1.65□□□□□ -2.15
SH3KBP1Q96B97 JPX_2.1-201ENST00000614161 69 ntBASIC1.65□□□□□ -2.15
SH3KBP1Q96B97 AC013791.1-201ENST00000616619 62 ntBASIC1.65□□□□□ -2.15
SH3KBP1Q96B97 MIRLET7C-201ENST00000362160 84 ntBASIC1.64□□□□□ -2.15
SH3KBP1Q96B97 MIR337-201ENST00000362281 93 ntBASIC1.64□□□□□ -2.15
SH3KBP1Q96B97 RNU6-1209P-201ENST00000363655 107 ntBASIC1.64□□□□□ -2.15
SH3KBP1Q96B97 RNU6-211P-201ENST00000384047 107 ntBASIC1.64□□□□□ -2.15
SH3KBP1Q96B97 AL603910.2-201ENST00000407268 136 ntBASIC1.64□□□□□ -2.15
SH3KBP1Q96B97 BTF3P4-201ENST00000418852 495 ntBASIC1.64□□□□□ -2.15
SH3KBP1Q96B97 AC079140.2-201ENST00000506193 142 ntBASIC1.64□□□□□ -2.15
SH3KBP1Q96B97 Y_RNA.679-201ENST00000516416 91 ntBASIC1.64□□□□□ -2.15
SH3KBP1Q96B97 RPL23AP91-201ENST00000569211 455 ntBASIC1.64□□□□□ -2.15
SH3KBP1Q96B97 AC015688.6-201ENST00000577737 104 ntBASIC1.64□□□□□ -2.15
SH3KBP1Q96B97 AL365434.2-201ENST00000607979 234 ntBASIC1.64□□□□□ -2.15
SH3KBP1Q96B97 U2.14-201ENST00000615943 113 ntBASIC1.64□□□□□ -2.15
SH3KBP1Q96B97 AL121890.5-201ENST00000620848 304 ntBASIC1.64□□□□□ -2.15
SH3KBP1Q96B97 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
SH3KBP1Q96B97 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.63□□□□□ -2.15
SH3KBP1Q96B97 UBE2WP1-201ENST00000362030 340 ntBASIC1.63□□□□□ -2.15
SH3KBP1Q96B97 MIR335-201ENST00000362173 94 ntBASIC1.63□□□□□ -2.15
SH3KBP1Q96B97 MIR522-201ENST00000385071 87 ntBASIC1.63□□□□□ -2.15
SH3KBP1Q96B97 RNU6-131P-201ENST00000391144 107 ntBASIC1.63□□□□□ -2.15
SH3KBP1Q96B97 RNU1-98P-201ENST00000458992 160 ntBASIC1.63□□□□□ -2.15
SH3KBP1Q96B97 MIR3937-201ENST00000580135 106 ntBASIC1.63□□□□□ -2.15
SH3KBP1Q96B97 AC120024.3-201ENST00000603167 156 ntBASIC1.63□□□□□ -2.15
SH3KBP1Q96B97 AL078604.3-201ENST00000615580 211 ntBASIC1.63□□□□□ -2.15
SH3KBP1Q96B97 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.63□□□□□ -2.15
SH3KBP1Q96B97 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.62□□□□□ -2.15
SH3KBP1Q96B97 SNORD27-201ENST00000363981 72 ntBASIC1.62□□□□□ -2.15
SH3KBP1Q96B97 Y_RNA.590-201ENST00000410140 107 ntBASIC1.62□□□□□ -2.15
SH3KBP1Q96B97 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.62□□□□□ -2.15
SH3KBP1Q96B97 RNU6-1132P-201ENST00000459214 107 ntBASIC1.62□□□□□ -2.15
SH3KBP1Q96B97 AP001485.1-201ENST00000604799 199 ntBASIC1.62□□□□□ -2.15
SH3KBP1Q96B97 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
SH3KBP1Q96B97 U4.1-201ENST00000620349 87 ntBASIC1.62□□□□□ -2.15
SH3KBP1Q96B97 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.62□□□□□ -2.15
SH3KBP1Q96B97 MIR302D-201ENST00000362275 68 ntBASIC1.61□□□□□ -2.15
SH3KBP1Q96B97 Y_RNA.14-201ENST00000362415 103 ntBASIC1.61□□□□□ -2.15
SH3KBP1Q96B97 Y_RNA.796-201ENST00000364268 102 ntBASIC1.61□□□□□ -2.15
SH3KBP1Q96B97 Y_RNA.799-201ENST00000364992 102 ntBASIC1.61□□□□□ -2.15
SH3KBP1Q96B97 Y_RNA.572-201ENST00000384757 98 ntBASIC1.61□□□□□ -2.15
SH3KBP1Q96B97 MIR4643-201ENST00000577473 78 ntBASIC1.61□□□□□ -2.15
SH3KBP1Q96B97 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
SH3KBP1Q96B97 Y_RNA.144-201ENST00000363521 113 ntBASIC1.6□□□□□ -2.15
SH3KBP1Q96B97 SNORD50B-201ENST00000364995 70 ntBASIC1.6□□□□□ -2.15
SH3KBP1Q96B97 RNA5SP363-201ENST00000365072 115 ntBASIC1.6□□□□□ -2.15
SH3KBP1Q96B97 RNU6-1065P-201ENST00000384513 106 ntBASIC1.6□□□□□ -2.15
SH3KBP1Q96B97 MIR891A-201ENST00000401237 79 ntBASIC1.6□□□□□ -2.15
SH3KBP1Q96B97 RNU6-321P-201ENST00000410912 106 ntBASIC1.6□□□□□ -2.15
SH3KBP1Q96B97 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.6□□□□□ -2.15
SH3KBP1Q96B97 AC092991.1-201ENST00000477176 376 ntBASIC1.6□□□□□ -2.15
SH3KBP1Q96B97 SNORD45.4-201ENST00000516629 73 ntBASIC1.6□□□□□ -2.15
SH3KBP1Q96B97 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC1.6□□□□□ -2.15
SH3KBP1Q96B97 SNORD53B-201ENST00000577887 78 ntBASIC1.6□□□□□ -2.15
SH3KBP1Q96B97 MIR3149-201ENST00000584629 83 ntBASIC1.6□□□□□ -2.15
SH3KBP1Q96B97 AC006006.1-201ENST00000603082 144 ntBASIC1.6□□□□□ -2.15
SH3KBP1Q96B97 7SK.10-201ENST00000621414 298 ntBASIC1.6□□□□□ -2.15
SH3KBP1Q96B97 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC1.6□□□□□ -2.15
SH3KBP1Q96B97 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.15
SH3KBP1Q96B97 MIR367-201ENST00000362299 68 ntBASIC1.59□□□□□ -2.15
SH3KBP1Q96B97 Y_RNA.24-201ENST00000362508 103 ntBASIC1.59□□□□□ -2.15
SH3KBP1Q96B97 Y_RNA.65-201ENST00000362846 100 ntBASIC1.59□□□□□ -2.15
SH3KBP1Q96B97 RNU6-199P-201ENST00000362954 107 ntBASIC1.59□□□□□ -2.15
SH3KBP1Q96B97 Y_RNA.556-201ENST00000384677 113 ntBASIC1.59□□□□□ -2.15
SH3KBP1Q96B97 RNU4-62P-201ENST00000410125 130 ntBASIC1.59□□□□□ -2.15
SH3KBP1Q96B97 SNX2P2-201ENST00000424553 323 ntBASIC1.59□□□□□ -2.15
SH3KBP1Q96B97 RPL39P38-201ENST00000467018 153 ntBASIC1.59□□□□□ -2.15
SH3KBP1Q96B97 AC005840.1-201ENST00000498412 377 ntBASIC1.59□□□□□ -2.15
SH3KBP1Q96B97 CYCTP-201ENST00000504253 315 ntBASIC1.59□□□□□ -2.15
SH3KBP1Q96B97 TRMT112P2-201ENST00000512910 132 ntBASIC1.59□□□□□ -2.15
SH3KBP1Q96B97 RNU6-922P-201ENST00000516753 99 ntBASIC1.59□□□□□ -2.15
SH3KBP1Q96B97 Y_RNA.193-201ENST00000363979 102 ntBASIC1.58□□□□□ -2.16
SH3KBP1Q96B97 RNU6-702P-201ENST00000364982 107 ntBASIC1.58□□□□□ -2.16
SH3KBP1Q96B97 Y_RNA.352-201ENST00000365439 102 ntBASIC1.58□□□□□ -2.16
SH3KBP1Q96B97 RNU6-144P-201ENST00000383951 107 ntBASIC1.58□□□□□ -2.16
SH3KBP1Q96B97 SNORD26-201ENST00000384147 75 ntBASIC1.58□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 181.1 ms