Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 Y_RNA.626-201ENST00000411288 95 ntBASIC2.04□□□□□ -2.08
HPS3Q969F9 AL445685.2-201ENST00000422551 342 ntBASIC2.04□□□□□ -2.08
HPS3Q969F9 PGBD4P5-201ENST00000445958 426 ntBASIC2.04□□□□□ -2.08
HPS3Q969F9 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC2.04□□□□□ -2.08
HPS3Q969F9 AC009779.6-201ENST00000603972 165 ntBASIC2.04□□□□□ -2.08
HPS3Q969F9 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC2.04□□□□□ -2.08
HPS3Q969F9 AL513423.1-201ENST00000621695 132 ntBASIC2.04□□□□□ -2.08
HPS3Q969F9 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.04□□□□□ -2.08
HPS3Q969F9 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
HPS3Q969F9 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
HPS3Q969F9 RNU6-1084P-201ENST00000362498 107 ntBASIC2.03□□□□□ -2.08
HPS3Q969F9 Y_RNA.24-201ENST00000362508 103 ntBASIC2.03□□□□□ -2.08
HPS3Q969F9 Y_RNA.796-201ENST00000364268 102 ntBASIC2.03□□□□□ -2.08
HPS3Q969F9 RNU4-10P-201ENST00000364383 140 ntBASIC2.03□□□□□ -2.08
HPS3Q969F9 U8.5-201ENST00000364528 136 ntBASIC2.03□□□□□ -2.08
HPS3Q969F9 SNORA16.1-201ENST00000364597 132 ntBASIC2.03□□□□□ -2.08
HPS3Q969F9 Y_RNA.799-201ENST00000364992 102 ntBASIC2.03□□□□□ -2.08
HPS3Q969F9 RNU6-969P-201ENST00000383900 105 ntBASIC2.03□□□□□ -2.08
HPS3Q969F9 MIR676-201ENST00000390702 67 ntBASIC2.03□□□□□ -2.08
HPS3Q969F9 U8.13-201ENST00000390842 128 ntBASIC2.03□□□□□ -2.08
HPS3Q969F9 SNORA40.18-201ENST00000391200 128 ntBASIC2.03□□□□□ -2.08
HPS3Q969F9 RNU6ATAC23P-201ENST00000408448 123 ntBASIC2.03□□□□□ -2.08
HPS3Q969F9 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC2.03□□□□□ -2.08
HPS3Q969F9 MIR4762-201ENST00000585261 75 ntBASIC2.03□□□□□ -2.08
HPS3Q969F9 AC087685.1-201ENST00000587507 141 ntBASIC2.03□□□□□ -2.08
HPS3Q969F9 AC011921.3-201ENST00000605540 361 ntBASIC2.03□□□□□ -2.08
HPS3Q969F9 AC078938.1-201ENST00000620993 318 ntBASIC2.03□□□□□ -2.08
HPS3Q969F9 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC2.03□□□□□ -2.08
HPS3Q969F9 WWP1P1-201ENST00000466609 2769 ntBASIC2.03□□□□□ -2.09
HPS3Q969F9 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
HPS3Q969F9 RNU6-1123P-201ENST00000362347 106 ntBASIC2.02□□□□□ -2.09
HPS3Q969F9 Y_RNA.83-201ENST00000363005 113 ntBASIC2.02□□□□□ -2.09
HPS3Q969F9 Y_RNA.242-201ENST00000364473 110 ntBASIC2.02□□□□□ -2.09
HPS3Q969F9 Y_RNA.338-201ENST00000365320 114 ntBASIC2.02□□□□□ -2.09
HPS3Q969F9 RNU4-17P-201ENST00000365598 141 ntBASIC2.02□□□□□ -2.09
HPS3Q969F9 RNU6-439P-201ENST00000384188 106 ntBASIC2.02□□□□□ -2.09
HPS3Q969F9 MIR522-201ENST00000385071 87 ntBASIC2.02□□□□□ -2.09
HPS3Q969F9 MIR1278-201ENST00000408753 81 ntBASIC2.02□□□□□ -2.09
HPS3Q969F9 RN7SL274P-201ENST00000492268 272 ntBASIC2.02□□□□□ -2.09
HPS3Q969F9 RNA5SP182-201ENST00000516064 82 ntBASIC2.02□□□□□ -2.09
HPS3Q969F9 RNA5SP168-201ENST00000516642 112 ntBASIC2.02□□□□□ -2.09
HPS3Q969F9 MIR3671-201ENST00000580455 88 ntBASIC2.02□□□□□ -2.09
HPS3Q969F9 AC068700.1-201ENST00000565862 3754 ntBASIC2.02□□□□□ -2.09
HPS3Q969F9 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
HPS3Q969F9 MIR424-201ENST00000362227 98 ntBASIC2.01□□□□□ -2.09
HPS3Q969F9 RNU6-653P-201ENST00000363074 106 ntBASIC2.01□□□□□ -2.09
HPS3Q969F9 Y_RNA.140-201ENST00000363474 103 ntBASIC2.01□□□□□ -2.09
HPS3Q969F9 Y_RNA.257-201ENST00000364596 102 ntBASIC2.01□□□□□ -2.09
HPS3Q969F9 RNU6-424P-201ENST00000384367 105 ntBASIC2.01□□□□□ -2.09
HPS3Q969F9 RNU6-163P-201ENST00000384396 106 ntBASIC2.01□□□□□ -2.09
HPS3Q969F9 MIR30A-201ENST00000385092 71 ntBASIC2.01□□□□□ -2.09
HPS3Q969F9 CALM2P4-201ENST00000430810 426 ntBASIC2.01□□□□□ -2.09
HPS3Q969F9 AC099513.1-201ENST00000490423 301 ntBASIC2.01□□□□□ -2.09
HPS3Q969F9 CYCTP-201ENST00000504253 315 ntBASIC2.01□□□□□ -2.09
HPS3Q969F9 MIR4419B-201ENST00000577260 68 ntBASIC2.01□□□□□ -2.09
HPS3Q969F9 AP000942.3-201ENST00000603702 160 ntBASIC2.01□□□□□ -2.09
HPS3Q969F9 AC103810.8-201ENST00000607347 118 ntBASIC2.01□□□□□ -2.09
HPS3Q969F9 SNORD3E-202ENST00000627253 216 ntBASIC2.01□□□□□ -2.09
HPS3Q969F9 snoU2-30.1-201ENST00000365012 70 ntBASIC2□□□□□ -2.09
HPS3Q969F9 Y_RNA.308-201ENST00000365043 101 ntBASIC2□□□□□ -2.09
HPS3Q969F9 RNU6-203P-201ENST00000384038 104 ntBASIC2□□□□□ -2.09
HPS3Q969F9 MIR802-201ENST00000390235 94 ntBASIC2□□□□□ -2.09
HPS3Q969F9 SNORA12.1-201ENST00000390873 148 ntBASIC2□□□□□ -2.09
HPS3Q969F9 U8.16-201ENST00000391279 133 ntBASIC2□□□□□ -2.09
HPS3Q969F9 RN7SKP101-201ENST00000411376 320 ntBASIC2□□□□□ -2.09
HPS3Q969F9 RPL31P63-201ENST00000422565 375 ntBASIC2□□□□□ -2.09
HPS3Q969F9 RNU7-12P-201ENST00000516030 62 ntBASIC2□□□□□ -2.09
HPS3Q969F9 AC120024.3-201ENST00000603167 156 ntBASIC2□□□□□ -2.09
HPS3Q969F9 AC027279.3-201ENST00000625055 122 ntBASIC2□□□□□ -2.09
HPS3Q969F9 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC2□□□□□ -2.09
HPS3Q969F9 MIR660-201ENST00000385235 97 ntBASIC1.99□□□□□ -2.09
HPS3Q969F9 AC004965.1-201ENST00000413033 213 ntBASIC1.99□□□□□ -2.09
HPS3Q969F9 RN7SKP164-201ENST00000516138 266 ntBASIC1.99□□□□□ -2.09
HPS3Q969F9 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.99□□□□□ -2.09
HPS3Q969F9 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.99□□□□□ -2.09
HPS3Q969F9 MIR8081-201ENST00000611533 95 ntBASIC1.99□□□□□ -2.09
HPS3Q969F9 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
HPS3Q969F9 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
HPS3Q969F9 Y_RNA.229-201ENST00000364347 113 ntBASIC1.98□□□□□ -2.09
HPS3Q969F9 Y_RNA.238-201ENST00000364441 102 ntBASIC1.98□□□□□ -2.09
HPS3Q969F9 MIR891A-201ENST00000401237 79 ntBASIC1.98□□□□□ -2.09
HPS3Q969F9 RNA5SP247-201ENST00000411181 105 ntBASIC1.98□□□□□ -2.09
HPS3Q969F9 HMGN2P32-201ENST00000444648 269 ntBASIC1.98□□□□□ -2.09
HPS3Q969F9 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC1.98□□□□□ -2.09
HPS3Q969F9 snoU13.9-201ENST00000458927 103 ntBASIC1.98□□□□□ -2.09
HPS3Q969F9 SNORD11-201ENST00000459124 84 ntBASIC1.98□□□□□ -2.09
HPS3Q969F9 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.98□□□□□ -2.09
HPS3Q969F9 AC108729.3-201ENST00000513484 108 ntBASIC1.98□□□□□ -2.09
HPS3Q969F9 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.98□□□□□ -2.09
HPS3Q969F9 MIR3198-2-201ENST00000577868 80 ntBASIC1.98□□□□□ -2.09
HPS3Q969F9 Z83818.1-201ENST00000603584 150 ntBASIC1.98□□□□□ -2.09
HPS3Q969F9 MIR6845-201ENST00000613182 61 ntBASIC1.98□□□□□ -2.09
HPS3Q969F9 uc_338.4-201ENST00000616635 176 ntBASIC1.98□□□□□ -2.09
HPS3Q969F9 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
HPS3Q969F9 MIRLET7C-201ENST00000362160 84 ntBASIC1.97□□□□□ -2.09
HPS3Q969F9 RNU6-103P-201ENST00000363686 107 ntBASIC1.97□□□□□ -2.09
HPS3Q969F9 SNORD14E-201ENST00000364009 85 ntBASIC1.97□□□□□ -2.09
HPS3Q969F9 SNORD48-201ENST00000364953 64 ntBASIC1.97□□□□□ -2.09
HPS3Q969F9 MIR194-1-201ENST00000384892 85 ntBASIC1.97□□□□□ -2.09
HPS3Q969F9 MIR616-201ENST00000385293 97 ntBASIC1.97□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 208.2 ms