Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 AC055731.1-201ENST00000474387 401 ntBASIC2.01□□□□□ -2.09
ATG4AQ8WYN0 OR9P1P-201ENST00000496431 281 ntBASIC2.01□□□□□ -2.09
ATG4AQ8WYN0 Y_RNA.714-201ENST00000517065 90 ntBASIC2.01□□□□□ -2.09
ATG4AQ8WYN0 MIR1273D-201ENST00000577266 86 ntBASIC2.01□□□□□ -2.09
ATG4AQ8WYN0 AC087685.1-201ENST00000587507 141 ntBASIC2.01□□□□□ -2.09
ATG4AQ8WYN0 AC078899.2-201ENST00000595282 212 ntBASIC2.01□□□□□ -2.09
ATG4AQ8WYN0 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.01□□□□□ -2.09
ATG4AQ8WYN0 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.01□□□□□ -2.09
ATG4AQ8WYN0 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2□□□□□ -2.09
ATG4AQ8WYN0 Y_RNA.8-201ENST00000362353 102 ntBASIC2□□□□□ -2.09
ATG4AQ8WYN0 RNU6-112P-201ENST00000363599 104 ntBASIC2□□□□□ -2.09
ATG4AQ8WYN0 U8.5-201ENST00000364528 136 ntBASIC2□□□□□ -2.09
ATG4AQ8WYN0 Y_RNA.398-201ENST00000383952 99 ntBASIC2□□□□□ -2.09
ATG4AQ8WYN0 MIR522-201ENST00000385071 87 ntBASIC2□□□□□ -2.09
ATG4AQ8WYN0 SNORA12.1-201ENST00000390873 148 ntBASIC2□□□□□ -2.09
ATG4AQ8WYN0 Y_RNA.580-201ENST00000391004 95 ntBASIC2□□□□□ -2.09
ATG4AQ8WYN0 RNU6-131P-201ENST00000391144 107 ntBASIC2□□□□□ -2.09
ATG4AQ8WYN0 SNORA79-201ENST00000408376 140 ntBASIC2□□□□□ -2.09
ATG4AQ8WYN0 Z98742.3-201ENST00000418637 326 ntBASIC2□□□□□ -2.09
ATG4AQ8WYN0 AL356320.1-201ENST00000429616 163 ntBASIC2□□□□□ -2.09
ATG4AQ8WYN0 FTH1P12-201ENST00000432137 551 ntBASIC2□□□□□ -2.09
ATG4AQ8WYN0 RNU6-1299P-201ENST00000516316 100 ntBASIC2□□□□□ -2.09
ATG4AQ8WYN0 SNORA31.10-201ENST00000516482 106 ntBASIC2□□□□□ -2.09
ATG4AQ8WYN0 RNU7-149P-201ENST00000516739 59 ntBASIC2□□□□□ -2.09
ATG4AQ8WYN0 MIR4662B-201ENST00000579498 81 ntBASIC2□□□□□ -2.09
ATG4AQ8WYN0 MIR4448-201ENST00000584360 86 ntBASIC2□□□□□ -2.09
ATG4AQ8WYN0 MIR4762-201ENST00000585261 75 ntBASIC2□□□□□ -2.09
ATG4AQ8WYN0 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC2□□□□□ -2.09
ATG4AQ8WYN0 GS1-279B7.1-204ENST00000641809 378 ntBASIC2□□□□□ -2.09
ATG4AQ8WYN0 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2□□□□□ -2.09
ATG4AQ8WYN0 SNORD68-201ENST00000363214 84 ntBASIC1.99□□□□□ -2.09
ATG4AQ8WYN0 SNORD116-18-201ENST00000383961 92 ntBASIC1.99□□□□□ -2.09
ATG4AQ8WYN0 RNU6-746P-201ENST00000384112 109 ntBASIC1.99□□□□□ -2.09
ATG4AQ8WYN0 RNU6-296P-201ENST00000384608 107 ntBASIC1.99□□□□□ -2.09
ATG4AQ8WYN0 SUMO2P12-201ENST00000405924 140 ntBASIC1.99□□□□□ -2.09
ATG4AQ8WYN0 RN7SKP200-201ENST00000410564 320 ntBASIC1.99□□□□□ -2.09
ATG4AQ8WYN0 RNU2-7P-201ENST00000410794 178 ntBASIC1.99□□□□□ -2.09
ATG4AQ8WYN0 AC006461.1-201ENST00000412637 326 ntBASIC1.99□□□□□ -2.09
ATG4AQ8WYN0 MLLT10P1-201ENST00000418346 262 ntBASIC1.99□□□□□ -2.09
ATG4AQ8WYN0 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.99□□□□□ -2.09
ATG4AQ8WYN0 AL445646.1-201ENST00000431784 216 ntBASIC1.99□□□□□ -2.09
ATG4AQ8WYN0 HSPE1P9-201ENST00000440046 311 ntBASIC1.99□□□□□ -2.09
ATG4AQ8WYN0 STAG3L5P-204ENST00000443759 179 ntBASIC1.99□□□□□ -2.09
ATG4AQ8WYN0 RNU6-197P-201ENST00000516680 100 ntBASIC1.99□□□□□ -2.09
ATG4AQ8WYN0 RNU6-126P-201ENST00000516685 103 ntBASIC1.99□□□□□ -2.09
ATG4AQ8WYN0 RNA5SP437-201ENST00000517249 129 ntBASIC1.99□□□□□ -2.09
ATG4AQ8WYN0 MTND5P41-201ENST00000517498 206 ntBASIC1.99□□□□□ -2.09
ATG4AQ8WYN0 AL160236.1-201ENST00000556317 195 ntBASIC1.99□□□□□ -2.09
ATG4AQ8WYN0 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC1.99□□□□□ -2.09
ATG4AQ8WYN0 MIR3124-201ENST00000582636 67 ntBASIC1.99□□□□□ -2.09
ATG4AQ8WYN0 AC008507.4-201ENST00000585464 127 ntBASIC1.99□□□□□ -2.09
ATG4AQ8WYN0 AC104984.5-201ENST00000586878 94 ntBASIC1.99□□□□□ -2.09
ATG4AQ8WYN0 SNORA28-201ENST00000606769 126 ntBASIC1.99□□□□□ -2.09
ATG4AQ8WYN0 MIR6715A-201ENST00000615929 79 ntBASIC1.99□□□□□ -2.09
ATG4AQ8WYN0 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.99□□□□□ -2.09
ATG4AQ8WYN0 MTND1P7-201ENST00000632801 297 ntBASIC1.99□□□□□ -2.09
ATG4AQ8WYN0 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
ATG4AQ8WYN0 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.99□□□□□ -2.09
ATG4AQ8WYN0 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
ATG4AQ8WYN0 SNORA4.2-201ENST00000365313 147 ntBASIC1.98□□□□□ -2.09
ATG4AQ8WYN0 RNU6-449P-201ENST00000383914 107 ntBASIC1.98□□□□□ -2.09
ATG4AQ8WYN0 RN7SKP223-201ENST00000410582 62 ntBASIC1.98□□□□□ -2.09
ATG4AQ8WYN0 RNA5SP100-201ENST00000410903 110 ntBASIC1.98□□□□□ -2.09
ATG4AQ8WYN0 RNA5SP59-201ENST00000410922 110 ntBASIC1.98□□□□□ -2.09
ATG4AQ8WYN0 RNA5SP489-201ENST00000410986 109 ntBASIC1.98□□□□□ -2.09
ATG4AQ8WYN0 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.98□□□□□ -2.09
ATG4AQ8WYN0 AL158823.1-201ENST00000418441 478 ntBASIC1.98□□□□□ -2.09
ATG4AQ8WYN0 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
ATG4AQ8WYN0 RPL23AP63-201ENST00000498752 471 ntBASIC1.98□□□□□ -2.09
ATG4AQ8WYN0 RNU7-200P-201ENST00000516105 62 ntBASIC1.98□□□□□ -2.09
ATG4AQ8WYN0 RNU1-41P-201ENST00000516161 162 ntBASIC1.98□□□□□ -2.09
ATG4AQ8WYN0 RNU1-48P-201ENST00000516400 162 ntBASIC1.98□□□□□ -2.09
ATG4AQ8WYN0 RNA5SP153-201ENST00000516498 76 ntBASIC1.98□□□□□ -2.09
ATG4AQ8WYN0 RNU7-121P-201ENST00000516604 62 ntBASIC1.98□□□□□ -2.09
ATG4AQ8WYN0 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.98□□□□□ -2.09
ATG4AQ8WYN0 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.98□□□□□ -2.09
ATG4AQ8WYN0 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.98□□□□□ -2.09
ATG4AQ8WYN0 Pinc.1-201ENST00000616452 154 ntBASIC1.98□□□□□ -2.09
ATG4AQ8WYN0 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.98□□□□□ -2.09
ATG4AQ8WYN0 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.98□□□□□ -2.09
ATG4AQ8WYN0 MIR219B-201ENST00000637023 88 ntBASIC1.98□□□□□ -2.09
ATG4AQ8WYN0 AL359851.1-201ENST00000569460 4997 ntBASIC1.98□□□□□ -2.09
ATG4AQ8WYN0 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.98□□□□□ -2.09
ATG4AQ8WYN0 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.97□□□□□ -2.09
ATG4AQ8WYN0 Y_RNA.242-201ENST00000364473 110 ntBASIC1.97□□□□□ -2.09
ATG4AQ8WYN0 RNU6-1130P-201ENST00000365434 107 ntBASIC1.97□□□□□ -2.09
ATG4AQ8WYN0 RNY1P5-201ENST00000383890 115 ntBASIC1.97□□□□□ -2.09
ATG4AQ8WYN0 Y_RNA.506-201ENST00000384494 102 ntBASIC1.97□□□□□ -2.09
ATG4AQ8WYN0 RN7SL274P-201ENST00000492268 272 ntBASIC1.97□□□□□ -2.09
ATG4AQ8WYN0 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.97□□□□□ -2.09
ATG4AQ8WYN0 MRPS17P9-201ENST00000511924 393 ntBASIC1.97□□□□□ -2.09
ATG4AQ8WYN0 RNA5SP481-201ENST00000516814 122 ntBASIC1.97□□□□□ -2.09
ATG4AQ8WYN0 Y_RNA.703-201ENST00000516846 111 ntBASIC1.97□□□□□ -2.09
ATG4AQ8WYN0 AC097639.2-201ENST00000603159 172 ntBASIC1.97□□□□□ -2.09
ATG4AQ8WYN0 MIR203B-201ENST00000636080 86 ntBASIC1.97□□□□□ -2.09
ATG4AQ8WYN0 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC1.97□□□□□ -2.09
ATG4AQ8WYN0 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.96□□□□□ -2.1
ATG4AQ8WYN0 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.96□□□□□ -2.1
ATG4AQ8WYN0 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
ATG4AQ8WYN0 Y_RNA.337-201ENST00000365312 102 ntBASIC1.96□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 127 ms