Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC1.81□□□□□ -2.12
SNED1Q8TER0 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC1.81□□□□□ -2.12
SNED1Q8TER0 AC022616.8-201ENST00000533569 253 ntBASIC1.81□□□□□ -2.12
SNED1Q8TER0 MIR4431-201ENST00000579990 94 ntBASIC1.81□□□□□ -2.12
SNED1Q8TER0 MIR3660-201ENST00000584845 100 ntBASIC1.81□□□□□ -2.12
SNED1Q8TER0 AL353770.2-201ENST00000620024 78 ntBASIC1.81□□□□□ -2.12
SNED1Q8TER0 Y_RNA.778-201ENST00000620203 90 ntBASIC1.81□□□□□ -2.12
SNED1Q8TER0 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.81□□□□□ -2.12
SNED1Q8TER0 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
SNED1Q8TER0 RNU6-969P-201ENST00000383900 105 ntBASIC1.8□□□□□ -2.12
SNED1Q8TER0 SNORD14D-201ENST00000384390 87 ntBASIC1.8□□□□□ -2.12
SNED1Q8TER0 AL354695.1-201ENST00000427935 228 ntBASIC1.8□□□□□ -2.12
SNED1Q8TER0 HMGN1P7-201ENST00000491722 313 ntBASIC1.8□□□□□ -2.12
SNED1Q8TER0 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.8□□□□□ -2.12
SNED1Q8TER0 SCARNA8-201ENST00000515924 131 ntBASIC1.8□□□□□ -2.12
SNED1Q8TER0 RNU6-453P-201ENST00000516819 85 ntBASIC1.8□□□□□ -2.12
SNED1Q8TER0 MIR4753-201ENST00000585119 83 ntBASIC1.8□□□□□ -2.12
SNED1Q8TER0 AC008873.1-201ENST00000625051 138 ntBASIC1.8□□□□□ -2.12
SNED1Q8TER0 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
SNED1Q8TER0 ZNF702P-202ENST00000434269 1966 ntBASIC1.79□□□□□ -2.12
SNED1Q8TER0 Y_RNA.172-201ENST00000363765 102 ntBASIC1.79□□□□□ -2.12
SNED1Q8TER0 RNU1-93P-201ENST00000364704 169 ntBASIC1.79□□□□□ -2.12
SNED1Q8TER0 U8.7-201ENST00000364940 136 ntBASIC1.79□□□□□ -2.12
SNED1Q8TER0 SNORD114-22-201ENST00000365423 72 ntBASIC1.79□□□□□ -2.12
SNED1Q8TER0 RNU6-144P-201ENST00000383951 107 ntBASIC1.79□□□□□ -2.12
SNED1Q8TER0 RNU6-22P-201ENST00000384355 107 ntBASIC1.79□□□□□ -2.12
SNED1Q8TER0 MIR300-201ENST00000401138 83 ntBASIC1.79□□□□□ -2.12
SNED1Q8TER0 MIR1283-1-201ENST00000408494 87 ntBASIC1.79□□□□□ -2.12
SNED1Q8TER0 RPS4XP11-201ENST00000446897 772 ntBASIC1.79□□□□□ -2.12
SNED1Q8TER0 AC074290.1-201ENST00000448883 135 ntBASIC1.79□□□□□ -2.12
SNED1Q8TER0 ATP5J2P3-201ENST00000451550 258 ntBASIC1.79□□□□□ -2.12
SNED1Q8TER0 AC245047.8-201ENST00000456455 284 ntBASIC1.79□□□□□ -2.12
SNED1Q8TER0 HMGN2P9-201ENST00000476875 229 ntBASIC1.79□□□□□ -2.12
SNED1Q8TER0 AC117454.1-201ENST00000491120 168 ntBASIC1.79□□□□□ -2.12
SNED1Q8TER0 RNA5SP272-201ENST00000516095 111 ntBASIC1.79□□□□□ -2.12
SNED1Q8TER0 RNU6-1007P-201ENST00000516586 107 ntBASIC1.79□□□□□ -2.12
SNED1Q8TER0 RNU7-121P-201ENST00000516604 62 ntBASIC1.79□□□□□ -2.12
SNED1Q8TER0 AL096840.1-201ENST00000603287 93 ntBASIC1.79□□□□□ -2.12
SNED1Q8TER0 AC012493.3-201ENST00000604494 112 ntBASIC1.79□□□□□ -2.12
SNED1Q8TER0 AL157834.3-201ENST00000615543 103 ntBASIC1.79□□□□□ -2.12
SNED1Q8TER0 AC022709.1-201ENST00000615967 87 ntBASIC1.79□□□□□ -2.12
SNED1Q8TER0 AL359851.1-201ENST00000569460 4997 ntBASIC1.78□□□□□ -2.12
SNED1Q8TER0 Y_RNA.361-201ENST00000365515 120 ntBASIC1.78□□□□□ -2.12
SNED1Q8TER0 SNORA20B-201ENST00000384220 132 ntBASIC1.78□□□□□ -2.12
SNED1Q8TER0 RNU6-417P-201ENST00000384712 107 ntBASIC1.78□□□□□ -2.12
SNED1Q8TER0 MIR616-201ENST00000385293 97 ntBASIC1.78□□□□□ -2.12
SNED1Q8TER0 MT-TT-201ENST00000387460 66 ntBASIC1.78□□□□□ -2.12
SNED1Q8TER0 AL353689.1-201ENST00000438895 199 ntBASIC1.78□□□□□ -2.12
SNED1Q8TER0 RPL23AP6-201ENST00000446637 472 ntBASIC1.78□□□□□ -2.12
SNED1Q8TER0 AC245102.2-201ENST00000448956 180 ntBASIC1.78□□□□□ -2.12
SNED1Q8TER0 AL121914.1-201ENST00000450188 156 ntBASIC1.78□□□□□ -2.12
SNED1Q8TER0 ATP5EP1-201ENST00000510257 156 ntBASIC1.78□□□□□ -2.12
SNED1Q8TER0 RNU6-426P-201ENST00000516464 97 ntBASIC1.78□□□□□ -2.12
SNED1Q8TER0 AC109810.1-201ENST00000534066 224 ntBASIC1.78□□□□□ -2.12
SNED1Q8TER0 AC011604.1-201ENST00000545978 196 ntBASIC1.78□□□□□ -2.12
SNED1Q8TER0 MIR4724-201ENST00000579485 89 ntBASIC1.78□□□□□ -2.12
SNED1Q8TER0 MIR548X2-201ENST00000579776 100 ntBASIC1.78□□□□□ -2.12
SNED1Q8TER0 MIR5688-201ENST00000580619 83 ntBASIC1.78□□□□□ -2.12
SNED1Q8TER0 MIR6767-201ENST00000637302 66 ntBASIC1.78□□□□□ -2.12
SNED1Q8TER0 AC068647.2-201ENST00000637380 353 ntBASIC1.78□□□□□ -2.12
SNED1Q8TER0 AC100821.1-201ENST00000523153 2479 ntBASIC1.78□□□□□ -2.12
SNED1Q8TER0 SNORD114-7-201ENST00000362520 77 ntBASIC1.77□□□□□ -2.13
SNED1Q8TER0 RNU1-22P-201ENST00000363334 158 ntBASIC1.77□□□□□ -2.13
SNED1Q8TER0 Y_RNA.337-201ENST00000365312 102 ntBASIC1.77□□□□□ -2.13
SNED1Q8TER0 RNU6-376P-201ENST00000384731 106 ntBASIC1.77□□□□□ -2.13
SNED1Q8TER0 MIR526A2-201ENST00000390198 65 ntBASIC1.77□□□□□ -2.13
SNED1Q8TER0 Y_RNA.586-201ENST00000391146 98 ntBASIC1.77□□□□□ -2.13
SNED1Q8TER0 MIR513C-201ENST00000401352 84 ntBASIC1.77□□□□□ -2.13
SNED1Q8TER0 AL355796.1-201ENST00000406706 323 ntBASIC1.77□□□□□ -2.13
SNED1Q8TER0 RNU2-51P-201ENST00000410708 197 ntBASIC1.77□□□□□ -2.13
SNED1Q8TER0 SNORD65B-201ENST00000459126 73 ntBASIC1.77□□□□□ -2.13
SNED1Q8TER0 AC114982.1-201ENST00000469402 321 ntBASIC1.77□□□□□ -2.13
SNED1Q8TER0 AC010409.1-201ENST00000487382 476 ntBASIC1.77□□□□□ -2.13
SNED1Q8TER0 AC107027.2-201ENST00000512197 115 ntBASIC1.77□□□□□ -2.13
SNED1Q8TER0 AC027419.1-201ENST00000522976 328 ntBASIC1.77□□□□□ -2.13
SNED1Q8TER0 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.77□□□□□ -2.13
SNED1Q8TER0 DNAJC19P2-201ENST00000593340 302 ntBASIC1.77□□□□□ -2.13
SNED1Q8TER0 snoZ196.1-201ENST00000625269 89 ntBASIC1.77□□□□□ -2.13
SNED1Q8TER0 RNU6-1290P-201ENST00000362957 109 ntBASIC1.76□□□□□ -2.13
SNED1Q8TER0 Y_RNA.124-201ENST00000363339 93 ntBASIC1.76□□□□□ -2.13
SNED1Q8TER0 RNU6-944P-201ENST00000364023 107 ntBASIC1.76□□□□□ -2.13
SNED1Q8TER0 RNA5SP363-201ENST00000365072 115 ntBASIC1.76□□□□□ -2.13
SNED1Q8TER0 RNU6-234P-201ENST00000365229 104 ntBASIC1.76□□□□□ -2.13
SNED1Q8TER0 RNU4-11P-201ENST00000365287 132 ntBASIC1.76□□□□□ -2.13
SNED1Q8TER0 MIR29C-201ENST00000385231 88 ntBASIC1.76□□□□□ -2.13
SNED1Q8TER0 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
SNED1Q8TER0 RNU6-1154P-201ENST00000391001 104 ntBASIC1.76□□□□□ -2.13
SNED1Q8TER0 RNU6-1228P-201ENST00000391014 107 ntBASIC1.76□□□□□ -2.13
SNED1Q8TER0 AL606845.1-201ENST00000404881 255 ntBASIC1.76□□□□□ -2.13
SNED1Q8TER0 RNU6-257P-201ENST00000410238 98 ntBASIC1.76□□□□□ -2.13
SNED1Q8TER0 SNORA36B-201ENST00000410438 131 ntBASIC1.76□□□□□ -2.13
SNED1Q8TER0 RNU6-383P-201ENST00000410864 94 ntBASIC1.76□□□□□ -2.13
SNED1Q8TER0 AC006461.1-201ENST00000412637 326 ntBASIC1.76□□□□□ -2.13
SNED1Q8TER0 AL158823.1-201ENST00000418441 478 ntBASIC1.76□□□□□ -2.13
SNED1Q8TER0 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.76□□□□□ -2.13
SNED1Q8TER0 AC016717.1-201ENST00000448918 286 ntBASIC1.76□□□□□ -2.13
SNED1Q8TER0 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.76□□□□□ -2.13
SNED1Q8TER0 AC004223.1-201ENST00000479840 271 ntBASIC1.76□□□□□ -2.13
SNED1Q8TER0 AC010598.1-201ENST00000510378 103 ntBASIC1.76□□□□□ -2.13
SNED1Q8TER0 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.76□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 184.8 ms