Protein–RNA interactions for Protein: Q8NEF3

CCDC112, Coiled-coil domain-containing protein 112, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC112Q8NEF3 RNU6-1199P-201ENST00000411249 104 ntBASIC-0.12□□□□□ -2.43
CCDC112Q8NEF3 AC090844.1-201ENST00000422019 156 ntBASIC-0.12□□□□□ -2.43
CCDC112Q8NEF3 MTND2P9-201ENST00000422293 931 ntBASIC-0.12□□□□□ -2.43
CCDC112Q8NEF3 MTND3P21-201ENST00000433774 331 ntBASIC-0.12□□□□□ -2.43
CCDC112Q8NEF3 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC-0.12□□□□□ -2.43
CCDC112Q8NEF3 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC-0.12□□□□□ -2.43
CCDC112Q8NEF3 RNU6-273P-201ENST00000516937 96 ntBASIC-0.12□□□□□ -2.43
CCDC112Q8NEF3 SCARNA16.5-201ENST00000517114 183 ntBASIC-0.12□□□□□ -2.43
CCDC112Q8NEF3 AC104408.1-201ENST00000605241 170 ntBASIC-0.12□□□□□ -2.43
CCDC112Q8NEF3 Z99129.1-201ENST00000612510 255 ntBASIC-0.12□□□□□ -2.43
CCDC112Q8NEF3 AC090617.10-201ENST00000624308 134 ntBASIC-0.12□□□□□ -2.43
CCDC112Q8NEF3 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC-0.13□□□□□ -2.43
CCDC112Q8NEF3 SNORA36.1-201ENST00000363424 132 ntBASIC-0.13□□□□□ -2.43
CCDC112Q8NEF3 RNU6-442P-201ENST00000383968 104 ntBASIC-0.13□□□□□ -2.43
CCDC112Q8NEF3 RNU6-1042P-201ENST00000384204 107 ntBASIC-0.13□□□□□ -2.43
CCDC112Q8NEF3 SNORD116-8-201ENST00000384365 95 ntBASIC-0.13□□□□□ -2.43
CCDC112Q8NEF3 RNU6-35P-201ENST00000384530 107 ntBASIC-0.13□□□□□ -2.43
CCDC112Q8NEF3 SEPT7P4-201ENST00000437076 306 ntBASIC-0.13□□□□□ -2.43
CCDC112Q8NEF3 AC091959.1-201ENST00000495857 238 ntBASIC-0.13□□□□□ -2.43
CCDC112Q8NEF3 RNU6-566P-201ENST00000516790 107 ntBASIC-0.13□□□□□ -2.43
CCDC112Q8NEF3 AC060780.3-201ENST00000589464 80 ntBASIC-0.13□□□□□ -2.43
CCDC112Q8NEF3 MIR1321-201ENST00000637766 79 ntBASIC-0.13□□□□□ -2.43
CCDC112Q8NEF3 AC024614.3-201ENST00000637860 256 ntBASIC-0.13□□□□□ -2.43
CCDC112Q8NEF3 RNU6-324P-201ENST00000363957 106 ntBASIC-0.14□□□□□ -2.43
CCDC112Q8NEF3 RNU6-923P-201ENST00000364753 107 ntBASIC-0.14□□□□□ -2.43
CCDC112Q8NEF3 RNU6-831P-201ENST00000384548 107 ntBASIC-0.14□□□□□ -2.43
CCDC112Q8NEF3 RNU2-59P-201ENST00000410482 191 ntBASIC-0.14□□□□□ -2.43
CCDC112Q8NEF3 RNU6-1148P-201ENST00000410992 104 ntBASIC-0.14□□□□□ -2.43
CCDC112Q8NEF3 CHEK2P4-201ENST00000450340 246 ntBASIC-0.14□□□□□ -2.43
CCDC112Q8NEF3 RNU7-62P-201ENST00000458856 62 ntBASIC-0.14□□□□□ -2.43
CCDC112Q8NEF3 RNU7-102P-201ENST00000458948 62 ntBASIC-0.14□□□□□ -2.43
CCDC112Q8NEF3 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC-0.14□□□□□ -2.43
CCDC112Q8NEF3 RNU6-436P-201ENST00000516171 114 ntBASIC-0.14□□□□□ -2.43
CCDC112Q8NEF3 RPL23AP91-201ENST00000569211 455 ntBASIC-0.14□□□□□ -2.43
CCDC112Q8NEF3 AC087685.1-201ENST00000587507 141 ntBASIC-0.14□□□□□ -2.43
CCDC112Q8NEF3 AC006380.1-201ENST00000603598 186 ntBASIC-0.14□□□□□ -2.43
CCDC112Q8NEF3 RN7SKP299-201ENST00000606679 301 ntBASIC-0.14□□□□□ -2.43
CCDC112Q8NEF3 RNU6V-201ENST00000384105 107 ntBASIC-0.15□□□□□ -2.43
CCDC112Q8NEF3 Y_RNA.473-201ENST00000384333 102 ntBASIC-0.15□□□□□ -2.43
CCDC112Q8NEF3 MIR125B2-201ENST00000385128 89 ntBASIC-0.15□□□□□ -2.43
CCDC112Q8NEF3 RNU6-192P-201ENST00000391253 100 ntBASIC-0.15□□□□□ -2.43
CCDC112Q8NEF3 RNU6-847P-201ENST00000411115 108 ntBASIC-0.15□□□□□ -2.43
CCDC112Q8NEF3 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC-0.15□□□□□ -2.43
CCDC112Q8NEF3 AC026782.1-201ENST00000512952 449 ntBASIC-0.15□□□□□ -2.43
CCDC112Q8NEF3 MIR3611-201ENST00000584484 83 ntBASIC-0.15□□□□□ -2.43
CCDC112Q8NEF3 AC018462.2-201ENST00000605375 395 ntBASIC-0.15□□□□□ -2.43
CCDC112Q8NEF3 MIR3662-201ENST00000637030 95 ntBASIC-0.15□□□□□ -2.43
CCDC112Q8NEF3 Y_RNA.301-201ENST00000364990 103 ntBASIC-0.16□□□□□ -2.44
CCDC112Q8NEF3 RNU6-302P-201ENST00000365249 107 ntBASIC-0.16□□□□□ -2.44
CCDC112Q8NEF3 RNU6-1323P-201ENST00000384025 107 ntBASIC-0.16□□□□□ -2.44
CCDC112Q8NEF3 RNU6-767P-201ENST00000384132 107 ntBASIC-0.16□□□□□ -2.44
CCDC112Q8NEF3 Y_RNA.567-201ENST00000384736 106 ntBASIC-0.16□□□□□ -2.44
CCDC112Q8NEF3 RNU6-1319P-201ENST00000390855 104 ntBASIC-0.16□□□□□ -2.44
CCDC112Q8NEF3 RNU6-747P-201ENST00000390928 104 ntBASIC-0.16□□□□□ -2.44
CCDC112Q8NEF3 RNU6-241P-201ENST00000391148 104 ntBASIC-0.16□□□□□ -2.44
CCDC112Q8NEF3 RNU6-447P-201ENST00000410293 104 ntBASIC-0.16□□□□□ -2.44
CCDC112Q8NEF3 RNU6-1118P-201ENST00000410382 104 ntBASIC-0.16□□□□□ -2.44
CCDC112Q8NEF3 RNU6-1076P-201ENST00000410397 104 ntBASIC-0.16□□□□□ -2.44
CCDC112Q8NEF3 RNU6-355P-201ENST00000410427 104 ntBASIC-0.16□□□□□ -2.44
CCDC112Q8NEF3 RNU6-791P-201ENST00000410467 104 ntBASIC-0.16□□□□□ -2.44
CCDC112Q8NEF3 RNU6-705P-201ENST00000410601 104 ntBASIC-0.16□□□□□ -2.44
CCDC112Q8NEF3 RNU6-1100P-201ENST00000410691 104 ntBASIC-0.16□□□□□ -2.44
CCDC112Q8NEF3 RNU6-860P-201ENST00000410860 104 ntBASIC-0.16□□□□□ -2.44
CCDC112Q8NEF3 RNU6-1217P-201ENST00000411276 104 ntBASIC-0.16□□□□□ -2.44
CCDC112Q8NEF3 RNU6-785P-201ENST00000411324 104 ntBASIC-0.16□□□□□ -2.44
CCDC112Q8NEF3 MIR18B-201ENST00000454574 71 ntBASIC-0.16□□□□□ -2.44
CCDC112Q8NEF3 SNORA18.4-201ENST00000516440 124 ntBASIC-0.16□□□□□ -2.44
CCDC112Q8NEF3 RNU6-966P-201ENST00000516479 104 ntBASIC-0.16□□□□□ -2.44
CCDC112Q8NEF3 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC-0.16□□□□□ -2.44
CCDC112Q8NEF3 SNORD92-201ENST00000585078 85 ntBASIC-0.16□□□□□ -2.44
CCDC112Q8NEF3 U6.90-201ENST00000614007 104 ntBASIC-0.16□□□□□ -2.44
CCDC112Q8NEF3 MIR6755-201ENST00000619993 66 ntBASIC-0.16□□□□□ -2.44
CCDC112Q8NEF3 U6.70-201ENST00000620287 104 ntBASIC-0.16□□□□□ -2.44
CCDC112Q8NEF3 Y_RNA.203-201ENST00000364106 102 ntBASIC-0.17□□□□□ -2.44
CCDC112Q8NEF3 SNORA1.2-201ENST00000365189 134 ntBASIC-0.17□□□□□ -2.44
CCDC112Q8NEF3 RNU6-601P-201ENST00000384540 107 ntBASIC-0.17□□□□□ -2.44
CCDC112Q8NEF3 Y_RNA.517-201ENST00000384551 106 ntBASIC-0.17□□□□□ -2.44
CCDC112Q8NEF3 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC-0.17□□□□□ -2.44
CCDC112Q8NEF3 AC074085.1-201ENST00000413598 418 ntBASIC-0.17□□□□□ -2.44
CCDC112Q8NEF3 SCARNA8-201ENST00000515924 131 ntBASIC-0.17□□□□□ -2.44
CCDC112Q8NEF3 RNU6-1314P-201ENST00000517139 104 ntBASIC-0.17□□□□□ -2.44
CCDC112Q8NEF3 OSBPL9P5-201ENST00000542581 171 ntBASIC-0.17□□□□□ -2.44
CCDC112Q8NEF3 MTND3P12-201ENST00000559068 328 ntBASIC-0.17□□□□□ -2.44
CCDC112Q8NEF3 AC133485.4-201ENST00000561835 220 ntBASIC-0.17□□□□□ -2.44
CCDC112Q8NEF3 MIR6740-201ENST00000618268 113 ntBASIC-0.17□□□□□ -2.44
CCDC112Q8NEF3 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC-0.17□□□□□ -2.44
CCDC112Q8NEF3 SNORA9.1-201ENST00000362412 131 ntBASIC-0.18□□□□□ -2.44
CCDC112Q8NEF3 SNORD114-5-201ENST00000362928 70 ntBASIC-0.18□□□□□ -2.44
CCDC112Q8NEF3 Y_RNA.170-201ENST00000363746 110 ntBASIC-0.18□□□□□ -2.44
CCDC112Q8NEF3 RNU6-364P-201ENST00000384387 107 ntBASIC-0.18□□□□□ -2.44
CCDC112Q8NEF3 RNU6-855P-201ENST00000410395 104 ntBASIC-0.18□□□□□ -2.44
CCDC112Q8NEF3 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC-0.18□□□□□ -2.44
CCDC112Q8NEF3 MTND2P22-201ENST00000444325 1033 ntBASIC-0.18□□□□□ -2.44
CCDC112Q8NEF3 RPL17P19-201ENST00000489069 552 ntBASIC-0.18□□□□□ -2.44
CCDC112Q8NEF3 MIR2355-201ENST00000517199 87 ntBASIC-0.18□□□□□ -2.44
CCDC112Q8NEF3 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC-0.18□□□□□ -2.44
CCDC112Q8NEF3 AC008507.4-201ENST00000585464 127 ntBASIC-0.18□□□□□ -2.44
CCDC112Q8NEF3 AC006441.5-201ENST00000612680 209 ntBASIC-0.18□□□□□ -2.44
CCDC112Q8NEF3 AC010332.2-201ENST00000613083 1904 ntBASIC-0.19□□□□□ -2.44
CCDC112Q8NEF3 RNU6-1099P-201ENST00000363533 107 ntBASIC-0.19□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 117.4 ms