Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 RNA5SP456-201ENST00000364002 114 ntBASIC2.29□□□□□ -2.04
SIMC1Q8NDZ2 Y_RNA.634-201ENST00000364811 113 ntBASIC2.29□□□□□ -2.04
SIMC1Q8NDZ2 SNORA67.4-201ENST00000384688 142 ntBASIC2.29□□□□□ -2.04
SIMC1Q8NDZ2 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
SIMC1Q8NDZ2 RNU6-482P-201ENST00000391068 107 ntBASIC2.29□□□□□ -2.04
SIMC1Q8NDZ2 RNA5SP425-201ENST00000410336 112 ntBASIC2.29□□□□□ -2.04
SIMC1Q8NDZ2 AL158823.1-201ENST00000418441 478 ntBASIC2.29□□□□□ -2.04
SIMC1Q8NDZ2 BX510359.4-201ENST00000423750 193 ntBASIC2.29□□□□□ -2.04
SIMC1Q8NDZ2 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.29□□□□□ -2.04
SIMC1Q8NDZ2 AC011604.1-201ENST00000545978 196 ntBASIC2.29□□□□□ -2.04
SIMC1Q8NDZ2 Y_RNA.757-201ENST00000578934 114 ntBASIC2.29□□□□□ -2.04
SIMC1Q8NDZ2 AC005786.1-201ENST00000588553 154 ntBASIC2.29□□□□□ -2.04
SIMC1Q8NDZ2 U2.20-201ENST00000613956 192 ntBASIC2.29□□□□□ -2.04
SIMC1Q8NDZ2 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
SIMC1Q8NDZ2 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
SIMC1Q8NDZ2 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
SIMC1Q8NDZ2 MIR340-201ENST00000362125 95 ntBASIC2.28□□□□□ -2.04
SIMC1Q8NDZ2 Y_RNA.120-201ENST00000363304 110 ntBASIC2.28□□□□□ -2.04
SIMC1Q8NDZ2 Y_RNA.280-201ENST00000364765 112 ntBASIC2.28□□□□□ -2.04
SIMC1Q8NDZ2 SNORA3.2-201ENST00000408221 125 ntBASIC2.28□□□□□ -2.04
SIMC1Q8NDZ2 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.28□□□□□ -2.04
SIMC1Q8NDZ2 RNU2-70P-201ENST00000410718 179 ntBASIC2.28□□□□□ -2.04
SIMC1Q8NDZ2 AC023449.1-201ENST00000454464 154 ntBASIC2.28□□□□□ -2.04
SIMC1Q8NDZ2 AC079804.2-201ENST00000490376 200 ntBASIC2.28□□□□□ -2.04
SIMC1Q8NDZ2 RN7SL636P-201ENST00000497504 294 ntBASIC2.28□□□□□ -2.04
SIMC1Q8NDZ2 AC108210.2-201ENST00000503681 201 ntBASIC2.28□□□□□ -2.04
SIMC1Q8NDZ2 Y_RNA.692-201ENST00000516627 105 ntBASIC2.28□□□□□ -2.04
SIMC1Q8NDZ2 RNU6-856P-201ENST00000516959 98 ntBASIC2.28□□□□□ -2.04
SIMC1Q8NDZ2 MIR4287-201ENST00000579398 78 ntBASIC2.28□□□□□ -2.04
SIMC1Q8NDZ2 AC097639.2-201ENST00000603159 172 ntBASIC2.28□□□□□ -2.04
SIMC1Q8NDZ2 U6.73-201ENST00000619194 103 ntBASIC2.28□□□□□ -2.04
SIMC1Q8NDZ2 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.28□□□□□ -2.04
SIMC1Q8NDZ2 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.28□□□□□ -2.04
SIMC1Q8NDZ2 MIR21-201ENST00000362134 72 ntBASIC2.27□□□□□ -2.05
SIMC1Q8NDZ2 RNA5SP493-201ENST00000364115 91 ntBASIC2.27□□□□□ -2.05
SIMC1Q8NDZ2 RNU6-476P-201ENST00000384726 107 ntBASIC2.27□□□□□ -2.05
SIMC1Q8NDZ2 MIR562-201ENST00000384894 95 ntBASIC2.27□□□□□ -2.05
SIMC1Q8NDZ2 RNY4P18-201ENST00000391107 89 ntBASIC2.27□□□□□ -2.05
SIMC1Q8NDZ2 RNA5SP450-201ENST00000411206 102 ntBASIC2.27□□□□□ -2.05
SIMC1Q8NDZ2 MLLT10P1-201ENST00000418346 262 ntBASIC2.27□□□□□ -2.05
SIMC1Q8NDZ2 RPS29P21-201ENST00000496272 170 ntBASIC2.27□□□□□ -2.05
SIMC1Q8NDZ2 RNU6-772P-201ENST00000516042 105 ntBASIC2.27□□□□□ -2.05
SIMC1Q8NDZ2 MIR3121-201ENST00000579680 77 ntBASIC2.27□□□□□ -2.05
SIMC1Q8NDZ2 AC131055.1-201ENST00000584626 316 ntBASIC2.27□□□□□ -2.05
SIMC1Q8NDZ2 MIR6129-201ENST00000616087 109 ntBASIC2.27□□□□□ -2.05
SIMC1Q8NDZ2 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC2.27□□□□□ -2.05
SIMC1Q8NDZ2 U4.3-201ENST00000621047 82 ntBASIC2.27□□□□□ -2.05
SIMC1Q8NDZ2 MIR3914-2-201ENST00000637339 95 ntBASIC2.27□□□□□ -2.05
SIMC1Q8NDZ2 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
SIMC1Q8NDZ2 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
SIMC1Q8NDZ2 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC2.26□□□□□ -2.05
SIMC1Q8NDZ2 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
SIMC1Q8NDZ2 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
SIMC1Q8NDZ2 RNU6-1144P-201ENST00000384247 104 ntBASIC2.26□□□□□ -2.05
SIMC1Q8NDZ2 MIR1253-201ENST00000408273 105 ntBASIC2.26□□□□□ -2.05
SIMC1Q8NDZ2 SNORA11.4-201ENST00000408823 129 ntBASIC2.26□□□□□ -2.05
SIMC1Q8NDZ2 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC2.26□□□□□ -2.05
SIMC1Q8NDZ2 AC060773.1-201ENST00000421698 310 ntBASIC2.26□□□□□ -2.05
SIMC1Q8NDZ2 HMGN2P3-201ENST00000433603 273 ntBASIC2.26□□□□□ -2.05
SIMC1Q8NDZ2 HMGN2P5-201ENST00000436882 273 ntBASIC2.26□□□□□ -2.05
SIMC1Q8NDZ2 AL158147.1-201ENST00000443970 75 ntBASIC2.26□□□□□ -2.05
SIMC1Q8NDZ2 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.26□□□□□ -2.05
SIMC1Q8NDZ2 RNU6-1146P-201ENST00000516282 102 ntBASIC2.26□□□□□ -2.05
SIMC1Q8NDZ2 RNU7-149P-201ENST00000516739 59 ntBASIC2.26□□□□□ -2.05
SIMC1Q8NDZ2 RNU2-60P-201ENST00000517290 128 ntBASIC2.26□□□□□ -2.05
SIMC1Q8NDZ2 AC046143.2-201ENST00000609789 160 ntBASIC2.26□□□□□ -2.05
SIMC1Q8NDZ2 Pinc.1-201ENST00000616452 154 ntBASIC2.26□□□□□ -2.05
SIMC1Q8NDZ2 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.26□□□□□ -2.05
SIMC1Q8NDZ2 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC2.25□□□□□ -2.05
SIMC1Q8NDZ2 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
SIMC1Q8NDZ2 AC245060.5-201ENST00000610778 3293 ntBASIC2.25□□□□□ -2.05
SIMC1Q8NDZ2 RNA5SP289-201ENST00000362332 137 ntBASIC2.25□□□□□ -2.05
SIMC1Q8NDZ2 SNORA63.4-201ENST00000362763 126 ntBASIC2.25□□□□□ -2.05
SIMC1Q8NDZ2 Y_RNA.114-201ENST00000363265 113 ntBASIC2.25□□□□□ -2.05
SIMC1Q8NDZ2 RNU1-96P-201ENST00000364163 162 ntBASIC2.25□□□□□ -2.05
SIMC1Q8NDZ2 RNU6-1138P-201ENST00000365359 106 ntBASIC2.25□□□□□ -2.05
SIMC1Q8NDZ2 Y_RNA.486-201ENST00000384398 107 ntBASIC2.25□□□□□ -2.05
SIMC1Q8NDZ2 SNORA40.5-201ENST00000391061 128 ntBASIC2.25□□□□□ -2.05
SIMC1Q8NDZ2 AL359511.1-201ENST00000402970 211 ntBASIC2.25□□□□□ -2.05
SIMC1Q8NDZ2 MIR1283-2-201ENST00000408621 87 ntBASIC2.25□□□□□ -2.05
SIMC1Q8NDZ2 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC2.25□□□□□ -2.05
SIMC1Q8NDZ2 OR9P1P-201ENST00000496431 281 ntBASIC2.25□□□□□ -2.05
SIMC1Q8NDZ2 PDCD5P2-201ENST00000507570 312 ntBASIC2.25□□□□□ -2.05
SIMC1Q8NDZ2 RNU6-1096P-201ENST00000517089 102 ntBASIC2.25□□□□□ -2.05
SIMC1Q8NDZ2 AC015712.3-201ENST00000559380 164 ntBASIC2.25□□□□□ -2.05
SIMC1Q8NDZ2 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.25□□□□□ -2.05
SIMC1Q8NDZ2 ZNF720P1-201ENST00000562403 1939 ntBASIC2.25□□□□□ -2.05
SIMC1Q8NDZ2 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.25□□□□□ -2.05
SIMC1Q8NDZ2 RNU6-508P-201ENST00000363231 103 ntBASIC2.24□□□□□ -2.05
SIMC1Q8NDZ2 MIR17-201ENST00000385012 84 ntBASIC2.24□□□□□ -2.05
SIMC1Q8NDZ2 SNORA26-201ENST00000391286 122 ntBASIC2.24□□□□□ -2.05
SIMC1Q8NDZ2 RNU4-53P-201ENST00000410828 140 ntBASIC2.24□□□□□ -2.05
SIMC1Q8NDZ2 HMGN2P34-201ENST00000437647 269 ntBASIC2.24□□□□□ -2.05
SIMC1Q8NDZ2 AL353689.1-201ENST00000438895 199 ntBASIC2.24□□□□□ -2.05
SIMC1Q8NDZ2 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.24□□□□□ -2.05
SIMC1Q8NDZ2 AC026436.1-201ENST00000510537 270 ntBASIC2.24□□□□□ -2.05
SIMC1Q8NDZ2 Y_RNA.709-201ENST00000516952 92 ntBASIC2.24□□□□□ -2.05
SIMC1Q8NDZ2 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.24□□□□□ -2.05
SIMC1Q8NDZ2 MTND5P34-201ENST00000568888 325 ntBASIC2.24□□□□□ -2.05
SIMC1Q8NDZ2 MIR3169-201ENST00000578032 83 ntBASIC2.24□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms