Protein–RNA interactions for Protein: Q8NDX5

PHC3, Polyhomeotic-like protein 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3Q8NDX5 MIR891A-201ENST00000401237 79 ntBASIC2.73□□□□□ -1.97
PHC3Q8NDX5 AL034345.1-201ENST00000407768 123 ntBASIC2.73□□□□□ -1.97
PHC3Q8NDX5 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC2.73□□□□□ -1.97
PHC3Q8NDX5 SNORA31.11-201ENST00000516528 139 ntBASIC2.73□□□□□ -1.97
PHC3Q8NDX5 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.73□□□□□ -1.97
PHC3Q8NDX5 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2.73□□□□□ -1.97
PHC3Q8NDX5 AC006441.5-201ENST00000612680 209 ntBASIC2.73□□□□□ -1.97
PHC3Q8NDX5 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC2.73□□□□□ -1.97
PHC3Q8NDX5 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
PHC3Q8NDX5 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC2.73□□□□□ -1.97
PHC3Q8NDX5 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.73□□□□□ -1.97
PHC3Q8NDX5 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
PHC3Q8NDX5 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.72□□□□□ -1.97
PHC3Q8NDX5 RNU1-112P-201ENST00000364401 164 ntBASIC2.72□□□□□ -1.97
PHC3Q8NDX5 SNORA80E-201ENST00000384744 137 ntBASIC2.72□□□□□ -1.97
PHC3Q8NDX5 MIR548O-201ENST00000408583 114 ntBASIC2.72□□□□□ -1.97
PHC3Q8NDX5 RNU2-7P-201ENST00000410794 178 ntBASIC2.72□□□□□ -1.97
PHC3Q8NDX5 AL158823.1-201ENST00000418441 478 ntBASIC2.72□□□□□ -1.97
PHC3Q8NDX5 ZNF861P-201ENST00000588126 639 ntBASIC2.72□□□□□ -1.97
PHC3Q8NDX5 AC006023.1-201ENST00000603944 259 ntBASIC2.72□□□□□ -1.97
PHC3Q8NDX5 MIR7106-201ENST00000612419 65 ntBASIC2.72□□□□□ -1.97
PHC3Q8NDX5 MIR6895-201ENST00000613497 78 ntBASIC2.72□□□□□ -1.97
PHC3Q8NDX5 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.72□□□□□ -1.97
PHC3Q8NDX5 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
PHC3Q8NDX5 Y_RNA.273-201ENST00000364703 102 ntBASIC2.71□□□□□ -1.98
PHC3Q8NDX5 SNORA48.1-201ENST00000390879 135 ntBASIC2.71□□□□□ -1.98
PHC3Q8NDX5 RNA5SP21-201ENST00000410917 96 ntBASIC2.71□□□□□ -1.98
PHC3Q8NDX5 AF228730.3-201ENST00000436691 102 ntBASIC2.71□□□□□ -1.98
PHC3Q8NDX5 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.71□□□□□ -1.98
PHC3Q8NDX5 GTF3AP2-201ENST00000557014 266 ntBASIC2.71□□□□□ -1.98
PHC3Q8NDX5 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC2.71□□□□□ -1.98
PHC3Q8NDX5 AL137847.3-201ENST00000611521 109 ntBASIC2.71□□□□□ -1.98
PHC3Q8NDX5 AC134878.1-201ENST00000619901 243 ntBASIC2.71□□□□□ -1.98
PHC3Q8NDX5 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
PHC3Q8NDX5 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.7□□□□□ -1.98
PHC3Q8NDX5 SNORA63D-201ENST00000364359 132 ntBASIC2.7□□□□□ -1.98
PHC3Q8NDX5 DEFA7P-201ENST00000382676 285 ntBASIC2.7□□□□□ -1.98
PHC3Q8NDX5 RNU1-52P-201ENST00000384190 164 ntBASIC2.7□□□□□ -1.98
PHC3Q8NDX5 RNU6-163P-201ENST00000384396 106 ntBASIC2.7□□□□□ -1.98
PHC3Q8NDX5 MIR520A-201ENST00000384862 85 ntBASIC2.7□□□□□ -1.98
PHC3Q8NDX5 MIR518F-201ENST00000384973 87 ntBASIC2.7□□□□□ -1.98
PHC3Q8NDX5 AL138827.1-201ENST00000402666 306 ntBASIC2.7□□□□□ -1.98
PHC3Q8NDX5 AC003982.1-202ENST00000469928 248 ntBASIC2.7□□□□□ -1.98
PHC3Q8NDX5 CYCTP-201ENST00000504253 315 ntBASIC2.7□□□□□ -1.98
PHC3Q8NDX5 RNU6-659P-201ENST00000516454 104 ntBASIC2.7□□□□□ -1.98
PHC3Q8NDX5 IGHVIII-67-2-201ENST00000519849 88 ntBASIC2.7□□□□□ -1.98
PHC3Q8NDX5 MIR3121-201ENST00000579680 77 ntBASIC2.7□□□□□ -1.98
PHC3Q8NDX5 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.7□□□□□ -1.98
PHC3Q8NDX5 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.7□□□□□ -1.98
PHC3Q8NDX5 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.7□□□□□ -1.98
PHC3Q8NDX5 AL136360.1-201ENST00000503377 1900 ntBASIC2.7□□□□□ -1.98
PHC3Q8NDX5 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC2.69□□□□□ -1.98
PHC3Q8NDX5 SNORA5B-201ENST00000363786 132 ntBASIC2.69□□□□□ -1.98
PHC3Q8NDX5 RNU6-268P-201ENST00000364174 107 ntBASIC2.69□□□□□ -1.98
PHC3Q8NDX5 RNU1-51P-201ENST00000365345 176 ntBASIC2.69□□□□□ -1.98
PHC3Q8NDX5 SNORA6-201ENST00000384033 151 ntBASIC2.69□□□□□ -1.98
PHC3Q8NDX5 MIR548A2-201ENST00000384956 97 ntBASIC2.69□□□□□ -1.98
PHC3Q8NDX5 AC105272.1-201ENST00000438604 198 ntBASIC2.69□□□□□ -1.98
PHC3Q8NDX5 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.69□□□□□ -1.98
PHC3Q8NDX5 RNU5E-3P-201ENST00000515913 68 ntBASIC2.69□□□□□ -1.98
PHC3Q8NDX5 RNVU1-2-201ENST00000516326 135 ntBASIC2.69□□□□□ -1.98
PHC3Q8NDX5 SNORA31.10-201ENST00000516482 106 ntBASIC2.69□□□□□ -1.98
PHC3Q8NDX5 SNORD14A-201ENST00000606526 91 ntBASIC2.69□□□□□ -1.98
PHC3Q8NDX5 U1.36-201ENST00000620684 176 ntBASIC2.69□□□□□ -1.98
PHC3Q8NDX5 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.69□□□□□ -1.98
PHC3Q8NDX5 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
PHC3Q8NDX5 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.69□□□□□ -1.98
PHC3Q8NDX5 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.68□□□□□ -1.98
PHC3Q8NDX5 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.68□□□□□ -1.98
PHC3Q8NDX5 RNU6-235P-201ENST00000362644 107 ntBASIC2.68□□□□□ -1.98
PHC3Q8NDX5 RNU6-647P-201ENST00000364243 107 ntBASIC2.68□□□□□ -1.98
PHC3Q8NDX5 Y_RNA.294-201ENST00000364916 102 ntBASIC2.68□□□□□ -1.98
PHC3Q8NDX5 Y_RNA.410-201ENST00000383992 113 ntBASIC2.68□□□□□ -1.98
PHC3Q8NDX5 SNORD38C-201ENST00000384381 69 ntBASIC2.68□□□□□ -1.98
PHC3Q8NDX5 HSPE1P9-201ENST00000440046 311 ntBASIC2.68□□□□□ -1.98
PHC3Q8NDX5 AL158147.1-201ENST00000443970 75 ntBASIC2.68□□□□□ -1.98
PHC3Q8NDX5 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC2.68□□□□□ -1.98
PHC3Q8NDX5 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC2.68□□□□□ -1.98
PHC3Q8NDX5 AC114811.1-201ENST00000507207 168 ntBASIC2.68□□□□□ -1.98
PHC3Q8NDX5 RNU2-60P-201ENST00000517290 128 ntBASIC2.68□□□□□ -1.98
PHC3Q8NDX5 AC245884.12-201ENST00000615364 59 ntBASIC2.68□□□□□ -1.98
PHC3Q8NDX5 MIR6852-201ENST00000621699 66 ntBASIC2.68□□□□□ -1.98
PHC3Q8NDX5 AC027279.3-201ENST00000625055 122 ntBASIC2.68□□□□□ -1.98
PHC3Q8NDX5 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
PHC3Q8NDX5 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
PHC3Q8NDX5 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
PHC3Q8NDX5 Y_RNA.114-201ENST00000363265 113 ntBASIC2.67□□□□□ -1.98
PHC3Q8NDX5 SNORD77.3-201ENST00000391113 65 ntBASIC2.67□□□□□ -1.98
PHC3Q8NDX5 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC2.67□□□□□ -1.98
PHC3Q8NDX5 SNRPGP14-201ENST00000435400 219 ntBASIC2.67□□□□□ -1.98
PHC3Q8NDX5 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.67□□□□□ -1.98
PHC3Q8NDX5 RNU7-107P-201ENST00000459121 61 ntBASIC2.67□□□□□ -1.98
PHC3Q8NDX5 RNU7-25P-201ENST00000516544 62 ntBASIC2.67□□□□□ -1.98
PHC3Q8NDX5 MIR6840-201ENST00000611937 71 ntBASIC2.67□□□□□ -1.98
PHC3Q8NDX5 ICE2P2-201ENST00000483823 2787 ntBASIC2.66□□□□□ -1.98
PHC3Q8NDX5 MTND5P32-201ENST00000560711 1802 ntBASIC2.66□□□□□ -1.98
PHC3Q8NDX5 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.66□□□□□ -1.98
PHC3Q8NDX5 SNORD115-28-201ENST00000363931 81 ntBASIC2.66□□□□□ -1.98
PHC3Q8NDX5 RNU6-1189P-201ENST00000383958 107 ntBASIC2.66□□□□□ -1.98
PHC3Q8NDX5 MIR144-201ENST00000384886 86 ntBASIC2.66□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 198.8 ms