Protein–RNA interactions for Protein: Q8NCU1

CCDC197, Putative uncharacterized protein CCDC197, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197Q8NCU1 Y_RNA.216-201ENST00000364205 93 ntBASIC0.95□□□□□ -2.26
CCDC197Q8NCU1 Y_RNA.276-201ENST00000364732 109 ntBASIC0.95□□□□□ -2.26
CCDC197Q8NCU1 RNU6-290P-201ENST00000365212 101 ntBASIC0.95□□□□□ -2.26
CCDC197Q8NCU1 Y_RNA.569-201ENST00000384749 103 ntBASIC0.95□□□□□ -2.26
CCDC197Q8NCU1 SNORA75.2-201ENST00000391138 150 ntBASIC0.95□□□□□ -2.26
CCDC197Q8NCU1 SNORA75.3-201ENST00000391231 150 ntBASIC0.95□□□□□ -2.26
CCDC197Q8NCU1 MIR1289-2-201ENST00000408360 111 ntBASIC0.95□□□□□ -2.26
CCDC197Q8NCU1 RNU7-41P-201ENST00000515917 61 ntBASIC0.95□□□□□ -2.26
CCDC197Q8NCU1 RNU7-43P-201ENST00000516554 64 ntBASIC0.95□□□□□ -2.26
CCDC197Q8NCU1 MIR4421-201ENST00000578133 69 ntBASIC0.95□□□□□ -2.26
CCDC197Q8NCU1 AC113195.1-201ENST00000579952 141 ntBASIC0.95□□□□□ -2.26
CCDC197Q8NCU1 MIR4764-201ENST00000580680 88 ntBASIC0.95□□□□□ -2.26
CCDC197Q8NCU1 MIR2681-201ENST00000581814 105 ntBASIC0.95□□□□□ -2.26
CCDC197Q8NCU1 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC0.95□□□□□ -2.26
CCDC197Q8NCU1 AL355297.3-201ENST00000604082 446 ntBASIC0.95□□□□□ -2.26
CCDC197Q8NCU1 AL391516.1-201ENST00000554380 2449 ntBASIC0.95□□□□□ -2.26
CCDC197Q8NCU1 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC0.94□□□□□ -2.26
CCDC197Q8NCU1 snoU2_19.2-201ENST00000363024 80 ntBASIC0.94□□□□□ -2.26
CCDC197Q8NCU1 RNU4-38P-201ENST00000364472 129 ntBASIC0.94□□□□□ -2.26
CCDC197Q8NCU1 Y_RNA.455-201ENST00000384230 98 ntBASIC0.94□□□□□ -2.26
CCDC197Q8NCU1 MIR520C-201ENST00000385005 87 ntBASIC0.94□□□□□ -2.26
CCDC197Q8NCU1 MIR1278-201ENST00000408753 81 ntBASIC0.94□□□□□ -2.26
CCDC197Q8NCU1 ELOCP20-201ENST00000422460 345 ntBASIC0.94□□□□□ -2.26
CCDC197Q8NCU1 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.94□□□□□ -2.26
CCDC197Q8NCU1 SNORD11-201ENST00000459124 84 ntBASIC0.94□□□□□ -2.26
CCDC197Q8NCU1 RNU7-21P-201ENST00000459430 62 ntBASIC0.94□□□□□ -2.26
CCDC197Q8NCU1 SNORD123-201ENST00000459473 70 ntBASIC0.94□□□□□ -2.26
CCDC197Q8NCU1 RPL39P28-201ENST00000465655 155 ntBASIC0.94□□□□□ -2.26
CCDC197Q8NCU1 MRPS35P2-201ENST00000508242 191 ntBASIC0.94□□□□□ -2.26
CCDC197Q8NCU1 AC131281.1-201ENST00000522984 164 ntBASIC0.94□□□□□ -2.26
CCDC197Q8NCU1 MIR4680-201ENST00000580906 66 ntBASIC0.94□□□□□ -2.26
CCDC197Q8NCU1 MIR4303-201ENST00000581299 66 ntBASIC0.94□□□□□ -2.26
CCDC197Q8NCU1 AC008507.4-201ENST00000585464 127 ntBASIC0.94□□□□□ -2.26
CCDC197Q8NCU1 AC136443.5-201ENST00000603741 370 ntBASIC0.94□□□□□ -2.26
CCDC197Q8NCU1 Y_RNA.214-201ENST00000364201 112 ntBASIC0.93□□□□□ -2.26
CCDC197Q8NCU1 RNU6-442P-201ENST00000383968 104 ntBASIC0.93□□□□□ -2.26
CCDC197Q8NCU1 Y_RNA.527-201ENST00000384573 102 ntBASIC0.93□□□□□ -2.26
CCDC197Q8NCU1 RNU6-763P-201ENST00000390865 106 ntBASIC0.93□□□□□ -2.26
CCDC197Q8NCU1 MTCO2P33-201ENST00000402100 465 ntBASIC0.93□□□□□ -2.26
CCDC197Q8NCU1 MIR1261-201ENST00000408659 82 ntBASIC0.93□□□□□ -2.26
CCDC197Q8NCU1 SNORA40.15-201ENST00000516884 107 ntBASIC0.93□□□□□ -2.26
CCDC197Q8NCU1 RPL23AP91-201ENST00000569211 455 ntBASIC0.93□□□□□ -2.26
CCDC197Q8NCU1 RNA5SP264-201ENST00000363115 107 ntBASIC0.92□□□□□ -2.26
CCDC197Q8NCU1 RNU6-770P-201ENST00000363929 105 ntBASIC0.92□□□□□ -2.26
CCDC197Q8NCU1 RNU6-899P-201ENST00000363947 107 ntBASIC0.92□□□□□ -2.26
CCDC197Q8NCU1 RNA5SP48-201ENST00000363969 126 ntBASIC0.92□□□□□ -2.26
CCDC197Q8NCU1 RNU6-806P-201ENST00000365147 105 ntBASIC0.92□□□□□ -2.26
CCDC197Q8NCU1 Y_RNA.541-201ENST00000384640 113 ntBASIC0.92□□□□□ -2.26
CCDC197Q8NCU1 AL603910.2-201ENST00000407268 136 ntBASIC0.92□□□□□ -2.26
CCDC197Q8NCU1 RPL21P38-201ENST00000418090 167 ntBASIC0.92□□□□□ -2.26
CCDC197Q8NCU1 MTCYBP6-201ENST00000441810 138 ntBASIC0.92□□□□□ -2.26
CCDC197Q8NCU1 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC0.92□□□□□ -2.26
CCDC197Q8NCU1 AC098869.1-201ENST00000481627 292 ntBASIC0.92□□□□□ -2.26
CCDC197Q8NCU1 UBL5P1-201ENST00000507979 193 ntBASIC0.92□□□□□ -2.26
CCDC197Q8NCU1 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.92□□□□□ -2.26
CCDC197Q8NCU1 MIR3945-201ENST00000581853 98 ntBASIC0.92□□□□□ -2.26
CCDC197Q8NCU1 AC012676.2-201ENST00000619258 186 ntBASIC0.92□□□□□ -2.26
CCDC197Q8NCU1 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC0.92□□□□□ -2.26
CCDC197Q8NCU1 AC008163.1-202ENST00000636004 2889 ntBASIC0.92□□□□□ -2.26
CCDC197Q8NCU1 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC0.91□□□□□ -2.26
CCDC197Q8NCU1 Y_RNA.26-201ENST00000362539 101 ntBASIC0.91□□□□□ -2.26
CCDC197Q8NCU1 RNU6-268P-201ENST00000364174 107 ntBASIC0.91□□□□□ -2.26
CCDC197Q8NCU1 MIR215-201ENST00000384858 110 ntBASIC0.91□□□□□ -2.26
CCDC197Q8NCU1 Y_RNA.637-201ENST00000459424 114 ntBASIC0.91□□□□□ -2.26
CCDC197Q8NCU1 SNORD124-201ENST00000459577 104 ntBASIC0.91□□□□□ -2.26
CCDC197Q8NCU1 RN7SKP164-201ENST00000516138 266 ntBASIC0.91□□□□□ -2.26
CCDC197Q8NCU1 RNU6-1137P-201ENST00000517073 99 ntBASIC0.91□□□□□ -2.26
CCDC197Q8NCU1 AC068700.1-201ENST00000565862 3754 ntBASIC0.91□□□□□ -2.26
CCDC197Q8NCU1 MIR103A2-201ENST00000362154 78 ntBASIC0.9□□□□□ -2.27
CCDC197Q8NCU1 Y_RNA.153-201ENST00000363615 91 ntBASIC0.9□□□□□ -2.27
CCDC197Q8NCU1 Y_RNA.210-201ENST00000364161 110 ntBASIC0.9□□□□□ -2.27
CCDC197Q8NCU1 RNU6-326P-201ENST00000365480 107 ntBASIC0.9□□□□□ -2.27
CCDC197Q8NCU1 SNORD38C-201ENST00000384381 69 ntBASIC0.9□□□□□ -2.27
CCDC197Q8NCU1 SNORD72-201ENST00000390994 80 ntBASIC0.9□□□□□ -2.27
CCDC197Q8NCU1 MIR1185-1-201ENST00000408598 86 ntBASIC0.9□□□□□ -2.27
CCDC197Q8NCU1 MTND4LP30-201ENST00000454092 297 ntBASIC0.9□□□□□ -2.27
CCDC197Q8NCU1 AC108210.2-201ENST00000503681 201 ntBASIC0.9□□□□□ -2.27
CCDC197Q8NCU1 RNU6-830P-201ENST00000516353 107 ntBASIC0.9□□□□□ -2.27
CCDC197Q8NCU1 Y_RNA.701-201ENST00000516812 110 ntBASIC0.9□□□□□ -2.27
CCDC197Q8NCU1 RNU2-31P-201ENST00000516954 155 ntBASIC0.9□□□□□ -2.27
CCDC197Q8NCU1 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.9□□□□□ -2.27
CCDC197Q8NCU1 AC013244.2-201ENST00000603396 103 ntBASIC0.9□□□□□ -2.27
CCDC197Q8NCU1 AL157834.3-201ENST00000615543 103 ntBASIC0.9□□□□□ -2.27
CCDC197Q8NCU1 AC013791.1-201ENST00000616619 62 ntBASIC0.9□□□□□ -2.27
CCDC197Q8NCU1 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.9□□□□□ -2.27
CCDC197Q8NCU1 Y_RNA.19-201ENST00000362462 99 ntBASIC0.89□□□□□ -2.27
CCDC197Q8NCU1 RNU6-1272P-201ENST00000362776 107 ntBASIC0.89□□□□□ -2.27
CCDC197Q8NCU1 SNORA25.3-201ENST00000363205 127 ntBASIC0.89□□□□□ -2.27
CCDC197Q8NCU1 RNU6-1205P-201ENST00000363625 106 ntBASIC0.89□□□□□ -2.27
CCDC197Q8NCU1 RNU6-144P-201ENST00000383951 107 ntBASIC0.89□□□□□ -2.27
CCDC197Q8NCU1 MIR200A-201ENST00000384875 90 ntBASIC0.89□□□□□ -2.27
CCDC197Q8NCU1 SNORD28B-201ENST00000390993 75 ntBASIC0.89□□□□□ -2.27
CCDC197Q8NCU1 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.89□□□□□ -2.27
CCDC197Q8NCU1 RNU7-90P-201ENST00000459216 62 ntBASIC0.89□□□□□ -2.27
CCDC197Q8NCU1 RN7SL429P-201ENST00000479090 223 ntBASIC0.89□□□□□ -2.27
CCDC197Q8NCU1 RN7SL489P-201ENST00000486185 223 ntBASIC0.89□□□□□ -2.27
CCDC197Q8NCU1 RN7SL327P-201ENST00000488659 223 ntBASIC0.89□□□□□ -2.27
CCDC197Q8NCU1 RNY3P15-201ENST00000516297 97 ntBASIC0.89□□□□□ -2.27
CCDC197Q8NCU1 MIR548AR-201ENST00000582191 57 ntBASIC0.89□□□□□ -2.27
CCDC197Q8NCU1 AL020996.3-201ENST00000606617 222 ntBASIC0.89□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 149.5 ms