Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 BX284668.6-201ENST00000606899 438 ntBASIC1.87□□□□□ -2.11
CCDC33Q8N5R6 Y_RNA.122-201ENST00000363331 96 ntBASIC1.86□□□□□ -2.11
CCDC33Q8N5R6 Y_RNA.447-201ENST00000384184 113 ntBASIC1.86□□□□□ -2.11
CCDC33Q8N5R6 RNA5SP247-201ENST00000411181 105 ntBASIC1.86□□□□□ -2.11
CCDC33Q8N5R6 SNRPGP10-201ENST00000432323 225 ntBASIC1.86□□□□□ -2.11
CCDC33Q8N5R6 snoU13.9-201ENST00000458927 103 ntBASIC1.86□□□□□ -2.11
CCDC33Q8N5R6 RNU6-1053P-201ENST00000515930 101 ntBASIC1.86□□□□□ -2.11
CCDC33Q8N5R6 Y_RNA.680-201ENST00000516441 93 ntBASIC1.86□□□□□ -2.11
CCDC33Q8N5R6 MIR4498-201ENST00000577599 66 ntBASIC1.86□□□□□ -2.11
CCDC33Q8N5R6 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
CCDC33Q8N5R6 WWP1P1-201ENST00000466609 2769 ntBASIC1.85□□□□□ -2.11
CCDC33Q8N5R6 ICE2P2-201ENST00000483823 2787 ntBASIC1.85□□□□□ -2.11
CCDC33Q8N5R6 MIR378A-201ENST00000362177 66 ntBASIC1.85□□□□□ -2.11
CCDC33Q8N5R6 Y_RNA.54-201ENST00000362766 105 ntBASIC1.85□□□□□ -2.11
CCDC33Q8N5R6 RNU6-1209P-201ENST00000363655 107 ntBASIC1.85□□□□□ -2.11
CCDC33Q8N5R6 Y_RNA.307-201ENST00000365022 117 ntBASIC1.85□□□□□ -2.11
CCDC33Q8N5R6 RNU6-338P-201ENST00000383888 105 ntBASIC1.85□□□□□ -2.11
CCDC33Q8N5R6 MIR526A2-201ENST00000390198 65 ntBASIC1.85□□□□□ -2.11
CCDC33Q8N5R6 CYCTP-201ENST00000504253 315 ntBASIC1.85□□□□□ -2.11
CCDC33Q8N5R6 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC1.85□□□□□ -2.11
CCDC33Q8N5R6 RNU6-1023P-201ENST00000516137 106 ntBASIC1.85□□□□□ -2.11
CCDC33Q8N5R6 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC1.85□□□□□ -2.11
CCDC33Q8N5R6 MIR3122-201ENST00000577243 73 ntBASIC1.85□□□□□ -2.11
CCDC33Q8N5R6 AC024614.2-201ENST00000577584 372 ntBASIC1.85□□□□□ -2.11
CCDC33Q8N5R6 MIR3128-201ENST00000581957 66 ntBASIC1.85□□□□□ -2.11
CCDC33Q8N5R6 AC120024.3-201ENST00000603167 156 ntBASIC1.85□□□□□ -2.11
CCDC33Q8N5R6 JPX_2.1-201ENST00000614161 69 ntBASIC1.85□□□□□ -2.11
CCDC33Q8N5R6 AC027279.3-201ENST00000625055 122 ntBASIC1.85□□□□□ -2.11
CCDC33Q8N5R6 SNORD3E-202ENST00000627253 216 ntBASIC1.85□□□□□ -2.11
CCDC33Q8N5R6 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.85□□□□□ -2.11
CCDC33Q8N5R6 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
CCDC33Q8N5R6 MIR513A1-201ENST00000385138 129 ntBASIC1.84□□□□□ -2.11
CCDC33Q8N5R6 MIR934-201ENST00000401241 83 ntBASIC1.84□□□□□ -2.11
CCDC33Q8N5R6 SNORD11-201ENST00000459124 84 ntBASIC1.84□□□□□ -2.11
CCDC33Q8N5R6 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.84□□□□□ -2.11
CCDC33Q8N5R6 MIR5688-201ENST00000580619 83 ntBASIC1.84□□□□□ -2.11
CCDC33Q8N5R6 AL021707.8-201ENST00000609428 183 ntBASIC1.84□□□□□ -2.11
CCDC33Q8N5R6 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
CCDC33Q8N5R6 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.83□□□□□ -2.12
CCDC33Q8N5R6 Y_RNA.76-201ENST00000362931 109 ntBASIC1.83□□□□□ -2.12
CCDC33Q8N5R6 RNU6-833P-201ENST00000363486 107 ntBASIC1.83□□□□□ -2.12
CCDC33Q8N5R6 Y_RNA.293-201ENST00000364908 93 ntBASIC1.83□□□□□ -2.12
CCDC33Q8N5R6 Y_RNA.304-201ENST00000365011 112 ntBASIC1.83□□□□□ -2.12
CCDC33Q8N5R6 Y_RNA.477-201ENST00000384352 108 ntBASIC1.83□□□□□ -2.12
CCDC33Q8N5R6 Y_RNA.539-201ENST00000384635 107 ntBASIC1.83□□□□□ -2.12
CCDC33Q8N5R6 RNU6-131P-201ENST00000391144 107 ntBASIC1.83□□□□□ -2.12
CCDC33Q8N5R6 RN7SKP101-201ENST00000411376 320 ntBASIC1.83□□□□□ -2.12
CCDC33Q8N5R6 Y_RNA.673-201ENST00000516306 88 ntBASIC1.83□□□□□ -2.12
CCDC33Q8N5R6 Y_RNA.679-201ENST00000516416 91 ntBASIC1.83□□□□□ -2.12
CCDC33Q8N5R6 RNU6-250P-201ENST00000516958 103 ntBASIC1.83□□□□□ -2.12
CCDC33Q8N5R6 AC100767.1-201ENST00000528178 123 ntBASIC1.83□□□□□ -2.12
CCDC33Q8N5R6 CBX3P4-201ENST00000538909 354 ntBASIC1.83□□□□□ -2.12
CCDC33Q8N5R6 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.83□□□□□ -2.12
CCDC33Q8N5R6 MIR4724-201ENST00000579485 89 ntBASIC1.83□□□□□ -2.12
CCDC33Q8N5R6 MIR3683-201ENST00000580847 82 ntBASIC1.83□□□□□ -2.12
CCDC33Q8N5R6 AC011921.3-201ENST00000605540 361 ntBASIC1.83□□□□□ -2.12
CCDC33Q8N5R6 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.83□□□□□ -2.12
CCDC33Q8N5R6 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
CCDC33Q8N5R6 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
CCDC33Q8N5R6 MIR367-201ENST00000362299 68 ntBASIC1.82□□□□□ -2.12
CCDC33Q8N5R6 Y_RNA.60-201ENST00000362831 98 ntBASIC1.82□□□□□ -2.12
CCDC33Q8N5R6 SNORD27-201ENST00000363981 72 ntBASIC1.82□□□□□ -2.12
CCDC33Q8N5R6 MIR1278-201ENST00000408753 81 ntBASIC1.82□□□□□ -2.12
CCDC33Q8N5R6 RNU6-383P-201ENST00000410864 94 ntBASIC1.82□□□□□ -2.12
CCDC33Q8N5R6 BTF3P4-201ENST00000418852 495 ntBASIC1.82□□□□□ -2.12
CCDC33Q8N5R6 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC1.82□□□□□ -2.12
CCDC33Q8N5R6 Y_RNA.714-201ENST00000517065 90 ntBASIC1.82□□□□□ -2.12
CCDC33Q8N5R6 RNU6-1116P-201ENST00000517269 99 ntBASIC1.82□□□□□ -2.12
CCDC33Q8N5R6 RPL23AP91-201ENST00000569211 455 ntBASIC1.82□□□□□ -2.12
CCDC33Q8N5R6 AC087685.1-201ENST00000587507 141 ntBASIC1.82□□□□□ -2.12
CCDC33Q8N5R6 AL442067.1-201ENST00000613261 223 ntBASIC1.82□□□□□ -2.12
CCDC33Q8N5R6 Y_RNA.802-201ENST00000614892 130 ntBASIC1.82□□□□□ -2.12
CCDC33Q8N5R6 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.82□□□□□ -2.12
CCDC33Q8N5R6 Y_RNA.401-201ENST00000383965 117 ntBASIC1.81□□□□□ -2.12
CCDC33Q8N5R6 RNU4-62P-201ENST00000410125 130 ntBASIC1.81□□□□□ -2.12
CCDC33Q8N5R6 Y_RNA.618-201ENST00000410949 107 ntBASIC1.81□□□□□ -2.12
CCDC33Q8N5R6 HSPE1P24-201ENST00000450782 238 ntBASIC1.81□□□□□ -2.12
CCDC33Q8N5R6 NDUFA4P2-201ENST00000489989 244 ntBASIC1.81□□□□□ -2.12
CCDC33Q8N5R6 AC114811.1-201ENST00000507207 168 ntBASIC1.81□□□□□ -2.12
CCDC33Q8N5R6 RNU7-12P-201ENST00000516030 62 ntBASIC1.81□□□□□ -2.12
CCDC33Q8N5R6 SNORD116-28-201ENST00000516123 91 ntBASIC1.81□□□□□ -2.12
CCDC33Q8N5R6 SUMO2P16-201ENST00000519475 264 ntBASIC1.81□□□□□ -2.12
CCDC33Q8N5R6 MIR4778-201ENST00000577635 80 ntBASIC1.81□□□□□ -2.12
CCDC33Q8N5R6 MIR4781-201ENST00000585250 76 ntBASIC1.81□□□□□ -2.12
CCDC33Q8N5R6 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.8□□□□□ -2.12
CCDC33Q8N5R6 RNU6-163P-201ENST00000384396 106 ntBASIC1.8□□□□□ -2.12
CCDC33Q8N5R6 SNORA8.3-201ENST00000384679 139 ntBASIC1.8□□□□□ -2.12
CCDC33Q8N5R6 MIR626-201ENST00000385032 94 ntBASIC1.8□□□□□ -2.12
CCDC33Q8N5R6 RNA5SP496-201ENST00000391240 109 ntBASIC1.8□□□□□ -2.12
CCDC33Q8N5R6 MIR891A-201ENST00000401237 79 ntBASIC1.8□□□□□ -2.12
CCDC33Q8N5R6 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC1.8□□□□□ -2.12
CCDC33Q8N5R6 MLLT10P1-201ENST00000418346 262 ntBASIC1.8□□□□□ -2.12
CCDC33Q8N5R6 PIGPP3-201ENST00000425307 415 ntBASIC1.8□□□□□ -2.12
CCDC33Q8N5R6 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.8□□□□□ -2.12
CCDC33Q8N5R6 AC107393.1-201ENST00000512403 346 ntBASIC1.8□□□□□ -2.12
CCDC33Q8N5R6 AC006006.1-201ENST00000603082 144 ntBASIC1.8□□□□□ -2.12
CCDC33Q8N5R6 snoU13.31-201ENST00000607291 104 ntBASIC1.8□□□□□ -2.12
CCDC33Q8N5R6 MIR8063-201ENST00000621930 81 ntBASIC1.8□□□□□ -2.12
CCDC33Q8N5R6 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
CCDC33Q8N5R6 RNU4-10P-201ENST00000364383 140 ntBASIC1.79□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 189.1 ms