Protein–RNA interactions for Protein: Q8IYE1

CCDC13, Coiled-coil domain-containing protein 13, humanhuman

Predictions only

Length 715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC13Q8IYE1 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
CCDC13Q8IYE1 AL391987.6-201ENST00000305671 199 ntBASIC1.55□□□□□ -2.16
CCDC13Q8IYE1 Y_RNA.116-201ENST00000363292 103 ntBASIC1.55□□□□□ -2.16
CCDC13Q8IYE1 RNU6-1048P-201ENST00000364054 107 ntBASIC1.55□□□□□ -2.16
CCDC13Q8IYE1 Y_RNA.275-201ENST00000364726 110 ntBASIC1.55□□□□□ -2.16
CCDC13Q8IYE1 MIR517C-201ENST00000385103 95 ntBASIC1.55□□□□□ -2.16
CCDC13Q8IYE1 U8.16-201ENST00000391279 133 ntBASIC1.55□□□□□ -2.16
CCDC13Q8IYE1 CALM2P4-201ENST00000430810 426 ntBASIC1.55□□□□□ -2.16
CCDC13Q8IYE1 AC245517.4-201ENST00000448601 281 ntBASIC1.55□□□□□ -2.16
CCDC13Q8IYE1 AC009474.2-201ENST00000451383 136 ntBASIC1.55□□□□□ -2.16
CCDC13Q8IYE1 RPS29P23-201ENST00000458635 123 ntBASIC1.55□□□□□ -2.16
CCDC13Q8IYE1 HMGN1P7-201ENST00000491722 313 ntBASIC1.55□□□□□ -2.16
CCDC13Q8IYE1 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.55□□□□□ -2.16
CCDC13Q8IYE1 U2.14-201ENST00000615943 113 ntBASIC1.55□□□□□ -2.16
CCDC13Q8IYE1 AL442644.1-201ENST00000454390 3105 ntBASIC1.55□□□□□ -2.16
CCDC13Q8IYE1 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.55□□□□□ -2.16
CCDC13Q8IYE1 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
CCDC13Q8IYE1 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.54□□□□□ -2.16
CCDC13Q8IYE1 SNORD33-201ENST00000362761 85 ntBASIC1.54□□□□□ -2.16
CCDC13Q8IYE1 Y_RNA.203-201ENST00000364106 102 ntBASIC1.54□□□□□ -2.16
CCDC13Q8IYE1 Y_RNA.396-201ENST00000383949 103 ntBASIC1.54□□□□□ -2.16
CCDC13Q8IYE1 RNU6-144P-201ENST00000383951 107 ntBASIC1.54□□□□□ -2.16
CCDC13Q8IYE1 Y_RNA.556-201ENST00000384677 113 ntBASIC1.54□□□□□ -2.16
CCDC13Q8IYE1 MIR522-201ENST00000385071 87 ntBASIC1.54□□□□□ -2.16
CCDC13Q8IYE1 MIR513A1-201ENST00000385138 129 ntBASIC1.54□□□□□ -2.16
CCDC13Q8IYE1 SNORA36B-201ENST00000410438 131 ntBASIC1.54□□□□□ -2.16
CCDC13Q8IYE1 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.54□□□□□ -2.16
CCDC13Q8IYE1 MTND3P2-201ENST00000438452 342 ntBASIC1.54□□□□□ -2.16
CCDC13Q8IYE1 AC027119.1-201ENST00000440877 241 ntBASIC1.54□□□□□ -2.16
CCDC13Q8IYE1 AC005357.1-201ENST00000588399 301 ntBASIC1.54□□□□□ -2.16
CCDC13Q8IYE1 AC013791.1-201ENST00000616619 62 ntBASIC1.54□□□□□ -2.16
CCDC13Q8IYE1 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.53□□□□□ -2.16
CCDC13Q8IYE1 Y_RNA.122-201ENST00000363331 96 ntBASIC1.53□□□□□ -2.16
CCDC13Q8IYE1 RNU6-833P-201ENST00000363486 107 ntBASIC1.53□□□□□ -2.16
CCDC13Q8IYE1 RNU1-42P-201ENST00000364033 160 ntBASIC1.53□□□□□ -2.16
CCDC13Q8IYE1 Y_RNA.327-201ENST00000365201 102 ntBASIC1.53□□□□□ -2.16
CCDC13Q8IYE1 SNORA67.6-201ENST00000391093 99 ntBASIC1.53□□□□□ -2.16
CCDC13Q8IYE1 RNU6-437P-201ENST00000459408 95 ntBASIC1.53□□□□□ -2.16
CCDC13Q8IYE1 RPL23AP54-201ENST00000495129 419 ntBASIC1.53□□□□□ -2.16
CCDC13Q8IYE1 CYCTP-201ENST00000504253 315 ntBASIC1.53□□□□□ -2.16
CCDC13Q8IYE1 RNA5SP61-201ENST00000516453 100 ntBASIC1.53□□□□□ -2.16
CCDC13Q8IYE1 SNORD3E-202ENST00000627253 216 ntBASIC1.53□□□□□ -2.16
CCDC13Q8IYE1 Y_RNA.44-201ENST00000362676 108 ntBASIC1.52□□□□□ -2.17
CCDC13Q8IYE1 Y_RNA.82-201ENST00000363000 102 ntBASIC1.52□□□□□ -2.17
CCDC13Q8IYE1 Y_RNA.92-201ENST00000363043 102 ntBASIC1.52□□□□□ -2.17
CCDC13Q8IYE1 Y_RNA.235-201ENST00000364412 102 ntBASIC1.52□□□□□ -2.17
CCDC13Q8IYE1 Y_RNA.306-201ENST00000365015 102 ntBASIC1.52□□□□□ -2.17
CCDC13Q8IYE1 Y_RNA.312-201ENST00000365089 102 ntBASIC1.52□□□□□ -2.17
CCDC13Q8IYE1 Y_RNA.322-201ENST00000365151 102 ntBASIC1.52□□□□□ -2.17
CCDC13Q8IYE1 RNU6-662P-201ENST00000384253 104 ntBASIC1.52□□□□□ -2.17
CCDC13Q8IYE1 Y_RNA.621-201ENST00000411065 96 ntBASIC1.52□□□□□ -2.17
CCDC13Q8IYE1 SNORD2.1-201ENST00000458762 69 ntBASIC1.52□□□□□ -2.17
CCDC13Q8IYE1 Y_RNA.650-201ENST00000459002 102 ntBASIC1.52□□□□□ -2.17
CCDC13Q8IYE1 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC1.52□□□□□ -2.17
CCDC13Q8IYE1 RNA5SP445-201ENST00000515889 115 ntBASIC1.52□□□□□ -2.17
CCDC13Q8IYE1 Y_RNA.668-201ENST00000516233 93 ntBASIC1.52□□□□□ -2.17
CCDC13Q8IYE1 SCARNA24.2-201ENST00000516968 130 ntBASIC1.52□□□□□ -2.17
CCDC13Q8IYE1 Y_RNA.777-201ENST00000516982 102 ntBASIC1.52□□□□□ -2.17
CCDC13Q8IYE1 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC1.52□□□□□ -2.17
CCDC13Q8IYE1 Y_RNA.771-201ENST00000598668 102 ntBASIC1.52□□□□□ -2.17
CCDC13Q8IYE1 AC120024.3-201ENST00000603167 156 ntBASIC1.52□□□□□ -2.17
CCDC13Q8IYE1 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC1.52□□□□□ -2.17
CCDC13Q8IYE1 MIR8063-201ENST00000621930 81 ntBASIC1.52□□□□□ -2.17
CCDC13Q8IYE1 Y_RNA.789-201ENST00000622480 102 ntBASIC1.52□□□□□ -2.17
CCDC13Q8IYE1 RNU6-60P-201ENST00000364792 103 ntBASIC1.51□□□□□ -2.17
CCDC13Q8IYE1 Y_RNA.562-201ENST00000384695 113 ntBASIC1.51□□□□□ -2.17
CCDC13Q8IYE1 MIR653-201ENST00000385279 96 ntBASIC1.51□□□□□ -2.17
CCDC13Q8IYE1 MTCO2P33-201ENST00000402100 465 ntBASIC1.51□□□□□ -2.17
CCDC13Q8IYE1 MIR1302-3-201ENST00000408128 138 ntBASIC1.51□□□□□ -2.17
CCDC13Q8IYE1 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.51□□□□□ -2.17
CCDC13Q8IYE1 AC079140.2-201ENST00000506193 142 ntBASIC1.51□□□□□ -2.17
CCDC13Q8IYE1 SNORA31.24-201ENST00000517232 57 ntBASIC1.51□□□□□ -2.17
CCDC13Q8IYE1 MIR5692C2-201ENST00000577959 77 ntBASIC1.51□□□□□ -2.17
CCDC13Q8IYE1 MIR5688-201ENST00000580619 83 ntBASIC1.51□□□□□ -2.17
CCDC13Q8IYE1 MIR2681-201ENST00000581814 105 ntBASIC1.51□□□□□ -2.17
CCDC13Q8IYE1 AL008718.3-201ENST00000610217 321 ntBASIC1.51□□□□□ -2.17
CCDC13Q8IYE1 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.51□□□□□ -2.17
CCDC13Q8IYE1 NAA50-211ENST00000630058 177 ntTSL 5 BASIC1.51□□□□□ -2.17
CCDC13Q8IYE1 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
CCDC13Q8IYE1 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
CCDC13Q8IYE1 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.51□□□□□ -2.17
CCDC13Q8IYE1 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
CCDC13Q8IYE1 MIR26B-201ENST00000362251 77 ntBASIC1.5□□□□□ -2.17
CCDC13Q8IYE1 SNORD68-201ENST00000363214 84 ntBASIC1.5□□□□□ -2.17
CCDC13Q8IYE1 RNU6-392P-201ENST00000364926 101 ntBASIC1.5□□□□□ -2.17
CCDC13Q8IYE1 BTF3P11-201ENST00000426582 477 ntBASIC1.5□□□□□ -2.17
CCDC13Q8IYE1 AL354695.1-201ENST00000427935 228 ntBASIC1.5□□□□□ -2.17
CCDC13Q8IYE1 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.5□□□□□ -2.17
CCDC13Q8IYE1 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC1.5□□□□□ -2.17
CCDC13Q8IYE1 SNORD127-201ENST00000458892 86 ntBASIC1.5□□□□□ -2.17
CCDC13Q8IYE1 RPL39P38-201ENST00000467018 153 ntBASIC1.5□□□□□ -2.17
CCDC13Q8IYE1 RNU6-902P-201ENST00000517212 91 ntBASIC1.5□□□□□ -2.17
CCDC13Q8IYE1 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC1.5□□□□□ -2.17
CCDC13Q8IYE1 MIR4282-201ENST00000583613 67 ntBASIC1.5□□□□□ -2.17
CCDC13Q8IYE1 AC087685.1-201ENST00000587507 141 ntBASIC1.5□□□□□ -2.17
CCDC13Q8IYE1 AL645939.4-201ENST00000604495 135 ntBASIC1.5□□□□□ -2.17
CCDC13Q8IYE1 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.5□□□□□ -2.17
CCDC13Q8IYE1 snoU18.1-201ENST00000629629 71 ntBASIC1.5□□□□□ -2.17
CCDC13Q8IYE1 AC068700.1-201ENST00000565862 3754 ntBASIC1.5□□□□□ -2.17
CCDC13Q8IYE1 RNU6-199P-201ENST00000362954 107 ntBASIC1.49□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 214.3 ms